RNA–Protein interactions for RNA: ENST00000390495.1

TRAJ42-201, Transcript of T cell receptor alpha joining 42, humanhuman

APPRIS P1 BASIC

Gene TRAJ42, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ42-201ENST00000390495 CXXC1Q9P0U4 656 aaPredicted RBP0.4□□□□□ -2.35
TRAJ42-201ENST00000390495 GULP1Q9UBP9 304 aa0.4□□□□□ -2.35
TRAJ42-201ENST00000390495 MAFBQ9Y5Q3 323 aaPredicted RBP0.4□□□□□ -2.35
TRAJ42-201ENST00000390495 KIF26BQ2KJY2 2108 aa0.4□□□□□ -2.35
TRAJ42-201ENST00000390495 PIPSLA2A3N6 862 aa0.39□□□□□ -2.35
TRAJ42-201ENST00000390495 CUTAO60888 179 aa0.39□□□□□ -2.35
TRAJ42-201ENST00000390495 CPNE3O75131 537 aaKnown RBP0.39□□□□□ -2.35
TRAJ42-201ENST00000390495 SEC24DO94855 1032 aaPredicted RBP0.39□□□□□ -2.35
TRAJ42-201ENST00000390495 OAZ2O95190 189 aa0.39□□□□□ -2.35
TRAJ42-201ENST00000390495 TBX6O95947 436 aaPredicted RBP0.39□□□□□ -2.35
TRAJ42-201ENST00000390495 MPSTP25325 297 aa0.39□□□□□ -2.35
TRAJ42-201ENST00000390495 POLD1P28340 1107 aa0.39□□□□□ -2.35
TRAJ42-201ENST00000390495 RABGGTBP53611 331 aa0.39□□□□□ -2.35
TRAJ42-201ENST00000390495 LLGL1Q15334 1064 aa0.39□□□□□ -2.35
TRAJ42-201ENST00000390495 ZIK1Q3SY52 487 aaPredicted RBP0.39□□□□□ -2.35
TRAJ42-201ENST00000390495 ZNF585BQ52M93 769 aa0.39□□□□□ -2.35
TRAJ42-201ENST00000390495 NBPF12Q5TAG4 269 aaPredicted RBP0.39□□□□□ -2.35
TRAJ42-201ENST00000390495 PCNX4Q63HM2 1172 aa0.39□□□□□ -2.35
TRAJ42-201ENST00000390495 Q7L0L9 218 aa0.39□□□□□ -2.35
TRAJ42-201ENST00000390495 PGBD4Q96DM1 585 aa0.39□□□□□ -2.35
TRAJ42-201ENST00000390495 C1QTNF5Q9BXJ0 243 aa0.39□□□□□ -2.35
TRAJ42-201ENST00000390495 SRRTQ9BXP5 876 aaKnown RBP0.39□□□□□ -2.35
TRAJ42-201ENST00000390495 EGLN1Q9GZT9 426 aa0.39□□□□□ -2.35
TRAJ42-201ENST00000390495 ASB6Q9NWX5 421 aa0.39□□□□□ -2.35
TRAJ42-201ENST00000390495 SLC17A6Q9P2U8 582 aa0.39□□□□□ -2.35
TRAJ42-201ENST00000390495 SORCS3Q9UPU3 1222 aa0.39□□□□□ -2.35
TRAJ42-201ENST00000390495 B4E1Z4 1266 aa0.38□□□□□ -2.35
TRAJ42-201ENST00000390495 PLCG1P19174 1290 aa0.38□□□□□ -2.35
TRAJ42-201ENST00000390495 RGS3P49796 1198 aa0.38□□□□□ -2.35
TRAJ42-201ENST00000390495 NPEPPSP55786 919 aa0.38□□□□□ -2.35
TRAJ42-201ENST00000390495 CWF19L1Q69YN2 538 aaKnown RBP0.38□□□□□ -2.35
TRAJ42-201ENST00000390495 HTR3DQ70Z44 454 aa0.38□□□□□ -2.35
TRAJ42-201ENST00000390495 MYPOPQ86VE0 399 aaPredicted RBP0.38□□□□□ -2.35
TRAJ42-201ENST00000390495 REPS2Q8NFH8 660 aa0.38□□□□□ -2.35
TRAJ42-201ENST00000390495 HELQQ8TDG4 1101 aa0.38□□□□□ -2.35
TRAJ42-201ENST00000390495 FAM193BQ96PV7 902 aaPredicted RBP0.38□□□□□ -2.35
TRAJ42-201ENST00000390495 SLITRK1Q96PX8 696 aa0.38□□□□□ -2.35
TRAJ42-201ENST00000390495 KIF2CQ99661 725 aa0.38□□□□□ -2.35
TRAJ42-201ENST00000390495 MRPS18AQ9NVS2 196 aaKnown RBP0.38□□□□□ -2.35
TRAJ42-201ENST00000390495 TFIP11Q9UBB9 837 aaKnown RBP0.38□□□□□ -2.35
TRAJ42-201ENST00000390495 PMS2P1A4D2B8 440 aa0.37□□□□□ -2.35
TRAJ42-201ENST00000390495 SLC26A4O43511 780 aa0.37□□□□□ -2.35
TRAJ42-201ENST00000390495 RECQL4O94761 1208 aa0.37□□□□□ -2.35
TRAJ42-201ENST00000390495 LRG1P02750 347 aa0.37□□□□□ -2.35
TRAJ42-201ENST00000390495 ELAVL1Q15717 326 aaKnown RBP0.37□□□□□ -2.35
TRAJ42-201ENST00000390495 AKNAD1Q5T1N1 836 aa0.37□□□□□ -2.35
TRAJ42-201ENST00000390495 USP30Q70CQ3 517 aa0.37□□□□□ -2.35
TRAJ42-201ENST00000390495 NEK8Q86SG6 692 aa0.37□□□□□ -2.35
TRAJ42-201ENST00000390495 MICAL1Q8TDZ2 1067 aa0.37□□□□□ -2.35
TRAJ42-201ENST00000390495 ANKRD9Q96BM1 317 aaPredicted RBP0.37□□□□□ -2.35
TRAJ42-201ENST00000390495 TMEM79Q9BSE2 394 aa0.37□□□□□ -2.35
TRAJ42-201ENST00000390495 ZFP69BQ9UJL9 534 aa0.37□□□□□ -2.35
TRAJ42-201ENST00000390495 SCAF4O95104 1147 aaKnown RBP0.36□□□□□ -2.35
TRAJ42-201ENST00000390495 MMP13P45452 471 aa0.36□□□□□ -2.35
TRAJ42-201ENST00000390495 NOP2P46087 812 aaKnown RBP0.36□□□□□ -2.35
TRAJ42-201ENST00000390495 VEGFCP49767 419 aa0.36□□□□□ -2.35
TRAJ42-201ENST00000390495 EXOSC10Q01780 885 aaKnown RBP0.36□□□□□ -2.35
TRAJ42-201ENST00000390495 SLC10A2Q12908 348 aaPredicted RBP0.36□□□□□ -2.35
TRAJ42-201ENST00000390495 GRM1Q13255 1194 aa0.36□□□□□ -2.35
TRAJ42-201ENST00000390495 ADAM15Q13444 863 aa0.36□□□□□ -2.35
TRAJ42-201ENST00000390495 TOP3AQ13472 1001 aaPredicted RBP0.36□□□□□ -2.35
TRAJ42-201ENST00000390495 ABHD17BQ5VST6 288 aa0.36□□□□□ -2.35
TRAJ42-201ENST00000390495 KRTAP5-10Q6L8G5 202 aa0.36□□□□□ -2.35
TRAJ42-201ENST00000390495 SUSD1Q6UWL2 747 aa0.36□□□□□ -2.35
TRAJ42-201ENST00000390495 SLITRK4Q8IW52 837 aa0.36□□□□□ -2.35
TRAJ42-201ENST00000390495 SLC44A3Q8N4M1 653 aa0.36□□□□□ -2.35
TRAJ42-201ENST00000390495 STPG3Q8N7X2 389 aa0.36□□□□□ -2.35
TRAJ42-201ENST00000390495 RHOVQ96L33 236 aa0.36□□□□□ -2.35
TRAJ42-201ENST00000390495 VRTNQ9H8Y1 702 aa0.36□□□□□ -2.35
TRAJ42-201ENST00000390495 KCND1Q9NSA2 647 aa0.36□□□□□ -2.35
TRAJ42-201ENST00000390495 TRMT13Q9NUP7 481 aaKnown RBP0.36□□□□□ -2.35
TRAJ42-201ENST00000390495 DNMT3BQ9UBC3 853 aaKnown RBP0.36□□□□□ -2.35
TRAJ42-201ENST00000390495 SEPT3Q9UH03 358 aa0.36□□□□□ -2.35
TRAJ42-201ENST00000390495 DRGXA6NNA5 263 aa0.35□□□□□ -2.35
TRAJ42-201ENST00000390495 CHURC1-FNTBB4DL54 471 aa0.35□□□□□ -2.35
TRAJ42-201ENST00000390495 CD1AP06126 327 aa0.35□□□□□ -2.35
TRAJ42-201ENST00000390495 GYPEP15421 78 aa0.35□□□□□ -2.35
TRAJ42-201ENST00000390495 WT1P19544 449 aaPredicted RBP0.35□□□□□ -2.35
TRAJ42-201ENST00000390495 CBLP22681 906 aa0.35□□□□□ -2.35
TRAJ42-201ENST00000390495 GLRBP48167 497 aa0.35□□□□□ -2.35
TRAJ42-201ENST00000390495 RIN1Q13671 783 aa0.35□□□□□ -2.35
TRAJ42-201ENST00000390495 RABEP1Q15276 862 aa0.35□□□□□ -2.35
TRAJ42-201ENST00000390495 LRRC41Q15345 812 aa0.35□□□□□ -2.35
TRAJ42-201ENST00000390495 TMEM201Q5SNT2 666 aa0.35□□□□□ -2.35
TRAJ42-201ENST00000390495 CEP85LQ5SZL2 805 aa0.35□□□□□ -2.35
TRAJ42-201ENST00000390495 HDGFL1Q5TGJ6 251 aa0.35□□□□□ -2.35
TRAJ42-201ENST00000390495 VASNQ6EMK4 673 aa0.35□□□□□ -2.35
TRAJ42-201ENST00000390495 C9orf47Q6ZRZ4 202 aa0.35□□□□□ -2.35
TRAJ42-201ENST00000390495 IRF2BP2Q7Z5L9 587 aa0.35□□□□□ -2.35
TRAJ42-201ENST00000390495 ATXN2LQ8WWM7 1075 aaKnown RBP0.35□□□□□ -2.35
TRAJ42-201ENST00000390495 DSCC1Q9BVC3 393 aa0.35□□□□□ -2.35
TRAJ42-201ENST00000390495 VPS16Q9H269 839 aa0.35□□□□□ -2.35
TRAJ42-201ENST00000390495 SFMBT1Q9UHJ3 866 aa0.35□□□□□ -2.35
TRAJ42-201ENST00000390495 MCM8Q9UJA3 840 aa0.35□□□□□ -2.35
TRAJ42-201ENST00000390495 ACIN1Q9UKV3 1341 aaKnown RBP0.35□□□□□ -2.35
TRAJ42-201ENST00000390495 A0A1W2PRX2 142 aa0.34□□□□□ -2.36
TRAJ42-201ENST00000390495 TRIM24O15164 1050 aa0.34□□□□□ -2.36
TRAJ42-201ENST00000390495 FBXO24O75426 580 aa0.34□□□□□ -2.36
TRAJ42-201ENST00000390495 LDLRP01130 860 aa0.34□□□□□ -2.36
TRAJ42-201ENST00000390495 HNRNPKP61978 463 aaKnown RBP eCLIP0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms