RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 MAPKBP1O60336 1514 aa7.51□□□□□ -1.21
TRAV35-201ENST00000390462 PLOD3O60568 738 aa7.5□□□□□ -1.21
TRAV35-201ENST00000390462 MSCO60682 206 aa7.5□□□□□ -1.21
TRAV35-201ENST00000390462 DDX58O95786 925 aaKnown RBP7.5□□□□□ -1.21
TRAV35-201ENST00000390462 SLC9A1P19634 815 aa7.5□□□□□ -1.21
TRAV35-201ENST00000390462 KRT9P35527 623 aa7.5□□□□□ -1.21
TRAV35-201ENST00000390462 MTNR1BP49286 362 aa7.5□□□□□ -1.21
TRAV35-201ENST00000390462 ARL4CP56559 192 aa7.5□□□□□ -1.21
TRAV35-201ENST00000390462 PIP4K2BP78356 416 aa7.5□□□□□ -1.21
TRAV35-201ENST00000390462 ST5P78524 1137 aa7.5□□□□□ -1.21
TRAV35-201ENST00000390462 SRSF2Q01130 221 aaKnown RBP7.5□□□□□ -1.21
TRAV35-201ENST00000390462 POLD3Q15054 466 aaPredicted RBP7.5□□□□□ -1.21
TRAV35-201ENST00000390462 DBN1Q16643 649 aa7.5□□□□□ -1.21
TRAV35-201ENST00000390462 DPY19L1Q2PZI1 675 aa7.5□□□□□ -1.21
TRAV35-201ENST00000390462 NBPF9Q3BBW0 867 aa7.5□□□□□ -1.21
TRAV35-201ENST00000390462 UAP1L1Q3KQV9 507 aa7.5□□□□□ -1.21
TRAV35-201ENST00000390462 MSL1Q68DK7 614 aa7.5□□□□□ -1.21
TRAV35-201ENST00000390462 GDF6Q6KF10 455 aaPredicted RBP7.5□□□□□ -1.21
TRAV35-201ENST00000390462 C16orf59Q7L2K0 433 aa7.5□□□□□ -1.21
TRAV35-201ENST00000390462 SYTL1Q8IYJ3 562 aa7.5□□□□□ -1.21
TRAV35-201ENST00000390462 VWA5B2Q8N398 1253 aa7.5□□□□□ -1.21
TRAV35-201ENST00000390462 LSMEM1Q8N8F7 131 aa7.5□□□□□ -1.21
TRAV35-201ENST00000390462 ZNF527Q8NB42 609 aa7.5□□□□□ -1.21
TRAV35-201ENST00000390462 NPLOC4Q8TAT6 608 aa7.5□□□□□ -1.21
TRAV35-201ENST00000390462 WNT8BQ93098 351 aa7.5□□□□□ -1.21
TRAV35-201ENST00000390462 VWCEQ96DN2 955 aa7.5□□□□□ -1.21
TRAV35-201ENST00000390462 ACAP3Q96P50 834 aa7.5□□□□□ -1.21
TRAV35-201ENST00000390462 NUDT16L1Q9BRJ7 211 aaKnown RBP7.5□□□□□ -1.21
TRAV35-201ENST00000390462 BTBD1Q9H0C5 482 aa7.5□□□□□ -1.21
TRAV35-201ENST00000390462 ATP6V0A4Q9HBG4 840 aa7.5□□□□□ -1.21
TRAV35-201ENST00000390462 MBIPQ9NS73 344 aa7.5□□□□□ -1.21
TRAV35-201ENST00000390462 ANKEF1Q9NU02 776 aa7.5□□□□□ -1.21
TRAV35-201ENST00000390462 TUBD1Q9UJT1 453 aa7.5□□□□□ -1.21
TRAV35-201ENST00000390462 MAGED2Q9UNF1 606 aaPredicted RBP7.5□□□□□ -1.21
TRAV35-201ENST00000390462 CORO2BQ9UQ03 480 aa7.5□□□□□ -1.21
TRAV35-201ENST00000390462 B4E171 279 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 MEFVO15553 781 aaPredicted RBP7.49□□□□□ -1.21
TRAV35-201ENST00000390462 KDM1AO60341 852 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 KRT37O76014 449 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 CST3P01034 146 aaPredicted RBP7.49□□□□□ -1.21
TRAV35-201ENST00000390462 ALDH2P05091 517 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 HOXD12P35452 270 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 TSPAN7P41732 249 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 STARD3Q14849 445 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 TESK1Q15569 626 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 ZNF174Q15697 407 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 SLC45A4Q5BKX6 768 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 TOR2AQ5JU69 321 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 FAM182BQ5T319 152 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 PRAMEF13Q5VWM6 474 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 SWSAP1Q6NVH7 229 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 FRMD7Q6ZUT3 714 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 RFX8Q6ZV50 586 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 CCDC155Q8N6L0 562 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 PANK1Q8TE04 598 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 FRS2Q8WU20 508 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 PPP1R13LQ8WUF5 828 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 COPS5Q92905 334 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 GMCL1Q96IK5 515 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 RSRC1Q96IZ7 334 aaKnown RBP7.49□□□□□ -1.21
TRAV35-201ENST00000390462 WDR18Q9BV38 432 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 BOCQ9BWV1 1114 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 UBN1Q9NPG3 1134 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 DCP1AQ9NPI6 582 aaPredicted RBP7.49□□□□□ -1.21
TRAV35-201ENST00000390462 VPS45Q9NRW7 570 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 TOMM22Q9NS69 142 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 NKIRAS2Q9NYR9 191 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 RNF112Q9ULX5 631 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 SF3B6Q9Y3B4 125 aaKnown RBP7.49□□□□□ -1.21
TRAV35-201ENST00000390462 ADAMTS12P58397 1594 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 GRIN2AQ12879 1464 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 ADCY10Q96PN6 1610 aa7.49□□□□□ -1.21
TRAV35-201ENST00000390462 CUX1P39880 1505 aa7.48□□□□□ -1.21
TRAV35-201ENST00000390462 PPRC1Q5VV67 1664 aaKnown RBP7.48□□□□□ -1.21
TRAV35-201ENST00000390462 DTNBO60941 627 aa7.48□□□□□ -1.21
TRAV35-201ENST00000390462 AOC2O75106 756 aa7.48□□□□□ -1.21
TRAV35-201ENST00000390462 SLITRK5O94991 958 aa7.48□□□□□ -1.21
TRAV35-201ENST00000390462 THBDP07204 575 aa7.48□□□□□ -1.21
TRAV35-201ENST00000390462 OSMP13725 252 aa7.48□□□□□ -1.21
TRAV35-201ENST00000390462 NTF4P34130 210 aa7.48□□□□□ -1.21
TRAV35-201ENST00000390462 KRT20P35900 424 aa7.48□□□□□ -1.21
TRAV35-201ENST00000390462 LTBRP36941 435 aa7.48□□□□□ -1.21
TRAV35-201ENST00000390462 CAP2P40123 477 aa7.48□□□□□ -1.21
TRAV35-201ENST00000390462 ROR1Q01973 937 aa7.48□□□□□ -1.21
TRAV35-201ENST00000390462 ZNF543Q08ER8 600 aa7.48□□□□□ -1.21
TRAV35-201ENST00000390462 PRKG1Q13976 671 aa7.48□□□□□ -1.21
TRAV35-201ENST00000390462 SLBPQ14493 270 aaKnown RBP eCLIP7.48□□□□□ -1.21
TRAV35-201ENST00000390462 TBC1D10BQ4KMP7 808 aaPredicted RBP7.48□□□□□ -1.21
TRAV35-201ENST00000390462 HP1BP3Q5SSJ5 553 aaPredicted RBP7.48□□□□□ -1.21
TRAV35-201ENST00000390462 CACNA2D3Q8IZS8 1091 aa7.48□□□□□ -1.21
TRAV35-201ENST00000390462 PCYOX1LQ8NBM8 494 aa7.48□□□□□ -1.21
TRAV35-201ENST00000390462 COA7Q96BR5 231 aa7.48□□□□□ -1.21
TRAV35-201ENST00000390462 KREMEN1Q96MU8 473 aa7.48□□□□□ -1.21
TRAV35-201ENST00000390462 SLC2A13Q96QE2 648 aa7.48□□□□□ -1.21
TRAV35-201ENST00000390462 ELF4Q99607 663 aaPredicted RBP7.48□□□□□ -1.21
TRAV35-201ENST00000390462 LPIN3Q9BQK8 851 aa7.48□□□□□ -1.21
TRAV35-201ENST00000390462 TMEFF2Q9UIK5 374 aaPredicted RBP7.48□□□□□ -1.21
TRAV35-201ENST00000390462 SLC6A14Q9UN76 642 aa7.48□□□□□ -1.21
TRAV35-201ENST00000390462 SNX13Q9Y5W8 968 aa7.48□□□□□ -1.21
TRAV35-201ENST00000390462 ST14Q9Y5Y6 855 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms