RNA–Protein interactions for RNA: ENST00000389759.7

PKP4-202, Transcript of plakophilin 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PKP4, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-202ENST00000389759 EPS15L1Q9UBC2 864 aa9.32□□□□□ -0.92
PKP4-202ENST00000389759 ZFP69BQ9UJL9 534 aa9.32□□□□□ -0.92
PKP4-202ENST00000389759 MRPL11Q9Y3B7 192 aaKnown RBP9.32□□□□□ -0.92
PKP4-202ENST00000389759 ZNF609O15014 1411 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 HEG1Q9ULI3 1381 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 ZNF804BA4D1E1 1349 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 ERBB3P21860 1342 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 PHF20L1A8MW92 1017 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 SPAG7O75391 227 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 PLS3P13797 630 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 MX2P20592 715 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 IL6STP40189 918 aaPredicted RBP9.31□□□□□ -0.92
PKP4-202ENST00000389759 CARSP49589 748 aaKnown RBP9.31□□□□□ -0.92
PKP4-202ENST00000389759 BASP1P80723 227 aaKnown RBP9.31□□□□□ -0.92
PKP4-202ENST00000389759 CDR2Q01850 454 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 ICA1Q05084 483 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 PPP2R5CQ13362 524 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 DYNC1I2Q13409 638 aaKnown RBP9.31□□□□□ -0.92
PKP4-202ENST00000389759 MMGT1Q8N4V1 131 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 GRAMD1AQ96CP6 724 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 BHMT2Q9H2M3 363 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 PCIF1Q9H4Z3 704 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 ASAP1Q9ULH1 1129 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 PALLDQ8WX93 1383 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 USP17L3A6NCW0 530 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 USP17L4A6NCW7 530 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 POTEMA6NI47 508 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 GPC4O75487 556 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 DNAJC8O75937 253 aaPredicted RBP9.31□□□□□ -0.92
PKP4-202ENST00000389759 HAUS5O94927 633 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 KRT1P04264 644 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 TMED1Q13445 227 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 MMEL1Q495T6 779 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 ANKRD40Q6AI12 368 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 USP17L1Q7RTZ2 530 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 RNF34Q969K3 372 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 PPWD1Q96BP3 646 aaKnown RBP9.31□□□□□ -0.92
PKP4-202ENST00000389759 DYNLL2Q96FJ2 89 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 NACC1Q96RE7 527 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 TMEM206Q9H813 350 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 SLC40A1Q9NP59 571 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 SAYSD1Q9NPB0 183 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 GEMIN8Q9NWZ8 242 aaKnown RBP9.31□□□□□ -0.92
PKP4-202ENST00000389759 PPARGC1AQ9UBK2 798 aaKnown RBP9.31□□□□□ -0.92
PKP4-202ENST00000389759 TTLL3Q9Y4R7 772 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 GARSP41250 739 aaKnown RBP9.31□□□□□ -0.92
PKP4-202ENST00000389759 CAV1Q03135 178 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 CDC37Q16543 378 aaPredicted RBP9.31□□□□□ -0.92
PKP4-202ENST00000389759 KRT80Q6KB66 452 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 PIP4K2CQ8TBX8 421 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 DYDC2Q96IM9 177 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 FAM81BQ96LP2 452 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 CCDC17Q96LX7 622 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 ACCSQ96QU6 501 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 MIS12Q9H081 205 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 PCDHB4Q9Y5E5 795 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 NLRP1Q9C000 1473 aa9.31□□□□□ -0.92
PKP4-202ENST00000389759 ENO4A6NNW6 628 aa9.3□□□□□ -0.92
PKP4-202ENST00000389759 LRRIQ3A6PVS8 624 aaPredicted RBP9.3□□□□□ -0.92
PKP4-202ENST00000389759 TTLL1O95922 423 aa9.3□□□□□ -0.92
PKP4-202ENST00000389759 P4HA1P13674 534 aa9.3□□□□□ -0.92
PKP4-202ENST00000389759 MRPS9P82933 396 aaKnown RBP9.3□□□□□ -0.92
PKP4-202ENST00000389759 MKRN3Q13064 507 aaKnown RBP9.3□□□□□ -0.92
PKP4-202ENST00000389759 PTGISQ16647 500 aa9.3□□□□□ -0.92
PKP4-202ENST00000389759 CERKLQ49MI3 558 aaPredicted RBP9.3□□□□□ -0.92
PKP4-202ENST00000389759 ANKRD20A4Q4UJ75 823 aa9.3□□□□□ -0.92
PKP4-202ENST00000389759 ANKRD20A8PQ5CZ79 823 aa9.3□□□□□ -0.92
PKP4-202ENST00000389759 ANKRD20A2Q5SQ80 823 aa9.3□□□□□ -0.92
PKP4-202ENST00000389759 ANKRD20A1Q5TYW2 823 aa9.3□□□□□ -0.92
PKP4-202ENST00000389759 DDX17Q92841 729 aaKnown RBP9.3□□□□□ -0.92
PKP4-202ENST00000389759 XPO6Q96QU8 1125 aaKnown RBP9.3□□□□□ -0.92
PKP4-202ENST00000389759 WDR11Q9BZH6 1224 aa9.3□□□□□ -0.92
PKP4-202ENST00000389759 ARL2BPQ9Y2Y0 163 aa9.3□□□□□ -0.92
PKP4-202ENST00000389759 IQANK1A0A1B0GTG1 560 aa9.3□□□□□ -0.92
PKP4-202ENST00000389759 MCF2LO15068 1137 aa9.3□□□□□ -0.92
PKP4-202ENST00000389759 ZRANB2O95218 330 aaKnown RBP eCLIP9.3□□□□□ -0.923e-7■■■■□ 25.7
PKP4-202ENST00000389759 FCER1AP12319 257 aa9.3□□□□□ -0.92
PKP4-202ENST00000389759 PIK3CAP42336 1068 aa9.3□□□□□ -0.92
PKP4-202ENST00000389759 GPC5P78333 572 aa9.3□□□□□ -0.92
PKP4-202ENST00000389759 DHX34Q14147 1143 aaKnown RBP9.3□□□□□ -0.92
PKP4-202ENST00000389759 UBE2SQ16763 222 aa9.3□□□□□ -0.92
PKP4-202ENST00000389759 ATG16L1Q676U5 607 aa9.3□□□□□ -0.92
PKP4-202ENST00000389759 RINT1Q6NUQ1 792 aa9.3□□□□□ -0.92
PKP4-202ENST00000389759 PPP1R2P3Q6NXS1 205 aa9.3□□□□□ -0.92
PKP4-202ENST00000389759 SPATA21Q7Z572 469 aa9.3□□□□□ -0.92
PKP4-202ENST00000389759 CCDC125Q86Z20 511 aa9.3□□□□□ -0.92
PKP4-202ENST00000389759 NME8Q8N427 588 aa9.3□□□□□ -0.92
PKP4-202ENST00000389759 TTC17Q96AE7 1141 aa9.3□□□□□ -0.92
PKP4-202ENST00000389759 RNPC3Q96LT9 517 aaKnown RBP9.3□□□□□ -0.92
PKP4-202ENST00000389759 TRIM9Q9C026 710 aa9.3□□□□□ -0.92
PKP4-202ENST00000389759 DCTN4Q9UJW0 460 aa9.3□□□□□ -0.92
PKP4-202ENST00000389759 MYO5CQ9NQX4 1742 aa9.3□□□□□ -0.92
PKP4-202ENST00000389759 TESPA1A2RU30 521 aaPredicted RBP9.3□□□□□ -0.92
PKP4-202ENST00000389759 AGTP01019 485 aa9.3□□□□□ -0.92
PKP4-202ENST00000389759 SLC16A2P36021 539 aa9.3□□□□□ -0.92
PKP4-202ENST00000389759 PLCB4Q15147 1175 aa9.3□□□□□ -0.92
PKP4-202ENST00000389759 SLC18A3Q16572 532 aa9.3□□□□□ -0.92
PKP4-202ENST00000389759 RSRC2Q7L4I2 434 aaKnown RBP9.3□□□□□ -0.92
PKP4-202ENST00000389759 RFX6Q8HWS3 928 aa9.3□□□□□ -0.92
PKP4-202ENST00000389759 RFFLQ8WZ73 363 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms