RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 COASYQ13057 564 aa15.43■□□□□ 0.06
RTF1-201ENST00000389629 PDXDC2PQ6P474 469 aa15.43■□□□□ 0.06
RTF1-201ENST00000389629 ZC3H18Q86VM9 953 aaKnown RBP15.43■□□□□ 0.06
RTF1-201ENST00000389629 RPUSD2Q8IZ73 545 aaKnown RBP15.43■□□□□ 0.06
RTF1-201ENST00000389629 NBPF3Q9H094 633 aa15.43■□□□□ 0.06
RTF1-201ENST00000389629 PCDHA1Q9Y5I3 950 aa15.43■□□□□ 0.06
RTF1-201ENST00000389629 BAZ2BQ9UIF8 2168 aaKnown RBP15.43■□□□□ 0.06
RTF1-201ENST00000389629 GRID2IPA4D2P6 1211 aa15.42■□□□□ 0.06
RTF1-201ENST00000389629 E9PMD0 336 aa15.42■□□□□ 0.06
RTF1-201ENST00000389629 CYP19A1P11511 503 aaPredicted RBP15.42■□□□□ 0.06
RTF1-201ENST00000389629 TCP10Q12799 353 aa15.42■□□□□ 0.06
RTF1-201ENST00000389629 RAD54LQ92698 747 aa15.42■□□□□ 0.06
RTF1-201ENST00000389629 P3H4Q92791 437 aa15.42■□□□□ 0.06
RTF1-201ENST00000389629 SH3GL3Q99963 347 aa15.42■□□□□ 0.06
RTF1-201ENST00000389629 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.42■□□□□ 0.063e-6■■■■□ 22
RTF1-201ENST00000389629 HSD3B7Q9H2F3 369 aa15.42■□□□□ 0.06
RTF1-201ENST00000389629 SLAIN2Q9P270 581 aa15.42■□□□□ 0.06
RTF1-201ENST00000389629 AGTPBP1Q9UPW5 1226 aa15.42■□□□□ 0.06
RTF1-201ENST00000389629 CFBP00751 764 aa15.42■□□□□ 0.06
RTF1-201ENST00000389629 DESP17661 470 aa15.42■□□□□ 0.06
RTF1-201ENST00000389629 RAD23BP54727 409 aa15.42■□□□□ 0.06
RTF1-201ENST00000389629 KCNQ4P56696 695 aa15.42■□□□□ 0.06
RTF1-201ENST00000389629 IRX1P78414 480 aaPredicted RBP15.42■□□□□ 0.06
RTF1-201ENST00000389629 SATB1Q01826 763 aa15.42■□□□□ 0.06
RTF1-201ENST00000389629 SH3RF3Q8TEJ3 882 aaPredicted RBP15.42■□□□□ 0.06
RTF1-201ENST00000389629 TRIM51Q9BSJ1 452 aa15.42■□□□□ 0.06
RTF1-201ENST00000389629 IRAK4Q9NWZ3 460 aa15.42■□□□□ 0.06
RTF1-201ENST00000389629 MYBL2P10244 700 aa15.42■□□□□ 0.06
RTF1-201ENST00000389629 SKIP12755 728 aa15.42■□□□□ 0.06
RTF1-201ENST00000389629 LRRC23Q53EV4 343 aaPredicted RBP15.42■□□□□ 0.06
RTF1-201ENST00000389629 AEBP2Q6ZN18 517 aaPredicted RBP15.42■□□□□ 0.06
RTF1-201ENST00000389629 KCTD1Q719H9 257 aa15.42■□□□□ 0.06
RTF1-201ENST00000389629 FAM186BQ8IYM0 893 aa15.42■□□□□ 0.06
RTF1-201ENST00000389629 TDP2O95551 362 aa15.42■□□□□ 0.06
RTF1-201ENST00000389629 MAP7Q14244 749 aa15.42■□□□□ 0.06
RTF1-201ENST00000389629 RCN2Q14257 317 aa15.42■□□□□ 0.06
RTF1-201ENST00000389629 GRM4Q14833 912 aa15.42■□□□□ 0.06
RTF1-201ENST00000389629 FAM178BQ8IXR5 827 aa15.42■□□□□ 0.06
RTF1-201ENST00000389629 SRRM1Q8IYB3 904 aaKnown RBP15.42■□□□□ 0.06
RTF1-201ENST00000389629 XPO6Q96QU8 1125 aaKnown RBP15.42■□□□□ 0.06
RTF1-201ENST00000389629 ECEL1O95672 775 aa15.41■□□□□ 0.06
RTF1-201ENST00000389629 PPM1KQ8N3J5 372 aa15.41■□□□□ 0.06
RTF1-201ENST00000389629 RUBCNQ92622 972 aa15.41■□□□□ 0.06
RTF1-201ENST00000389629 CFAP73A6NFT4 308 aa15.41■□□□□ 0.06
RTF1-201ENST00000389629 ORC4O43929 436 aa15.41■□□□□ 0.06
RTF1-201ENST00000389629 PKN1Q16512 942 aa15.41■□□□□ 0.06
RTF1-201ENST00000389629 SGO2Q562F6 1265 aa15.41■□□□□ 0.06
RTF1-201ENST00000389629 SLFN12Q8IYM2 578 aa15.41■□□□□ 0.06
RTF1-201ENST00000389629 PROM2Q8N271 834 aa15.41■□□□□ 0.06
RTF1-201ENST00000389629 CASKIN2Q8WXE0 1202 aa15.41■□□□□ 0.06
RTF1-201ENST00000389629 AARSP49588 968 aaKnown RBP eCLIP15.41■□□□□ 0.06
RTF1-201ENST00000389629 DPH6Q7L8W6 267 aa15.41■□□□□ 0.06
RTF1-201ENST00000389629 SDCCAG8Q86SQ7 713 aaPredicted RBP15.41■□□□□ 0.06
RTF1-201ENST00000389629 CTAGE3PQ8IX95 158 aa15.41■□□□□ 0.06
RTF1-201ENST00000389629 ANKRD35Q8N283 1001 aa15.41■□□□□ 0.06
RTF1-201ENST00000389629 MINPP1Q9UNW1 487 aa15.41■□□□□ 0.06
RTF1-201ENST00000389629 PLAGL2Q9UPG8 496 aa15.41■□□□□ 0.06
RTF1-201ENST00000389629 GLI1P08151 1106 aa15.41■□□□□ 0.06
RTF1-201ENST00000389629 HSD17B3P37058 310 aa15.41■□□□□ 0.06
RTF1-201ENST00000389629 CDK8P49336 464 aa15.41■□□□□ 0.06
RTF1-201ENST00000389629 NGLY1Q96IV0 654 aa15.41■□□□□ 0.06
RTF1-201ENST00000389629 BSDC1Q9NW68 430 aaPredicted RBP15.41■□□□□ 0.06
RTF1-201ENST00000389629 KDM6AO15550 1401 aaPredicted RBP15.41■□□□□ 0.06
RTF1-201ENST00000389629 CCT8L1PA6NM43 557 aa15.4■□□□□ 0.06
RTF1-201ENST00000389629 TCP11X1B4DZS4 312 aa15.4■□□□□ 0.06
RTF1-201ENST00000389629 I3L4J1 428 aa15.4■□□□□ 0.06
RTF1-201ENST00000389629 SCTRP47872 440 aa15.4■□□□□ 0.06
RTF1-201ENST00000389629 GTF2IP78347 998 aa15.4■□□□□ 0.06
RTF1-201ENST00000389629 SEPT2Q15019 361 aa15.4■□□□□ 0.06
RTF1-201ENST00000389629 KAZNQ674X7 775 aa15.4■□□□□ 0.06
RTF1-201ENST00000389629 TSEN2Q8NCE0 465 aaKnown RBP15.4■□□□□ 0.06
RTF1-201ENST00000389629 CELF4Q9BZC1 486 aaKnown RBP15.4■□□□□ 0.06
RTF1-201ENST00000389629 KIF9Q9HAQ2 790 aa15.4■□□□□ 0.06
RTF1-201ENST00000389629 JCADQ9P266 1359 aa15.4■□□□□ 0.06
RTF1-201ENST00000389629 USP17L5A8MUK1 530 aa15.4■□□□□ 0.06
RTF1-201ENST00000389629 FGFR4P22455 802 aa15.4■□□□□ 0.06
RTF1-201ENST00000389629 KLRC1P26715 233 aa15.4■□□□□ 0.06
RTF1-201ENST00000389629 ERFP50548 548 aa15.4■□□□□ 0.06
RTF1-201ENST00000389629 STRN3Q13033 797 aa15.4■□□□□ 0.06
RTF1-201ENST00000389629 TRAF1Q13077 416 aa15.4■□□□□ 0.06
RTF1-201ENST00000389629 TTI2Q6NXR4 508 aa15.4■□□□□ 0.06
RTF1-201ENST00000389629 PRPF38AQ8NAV1 312 aaKnown RBP15.4■□□□□ 0.06
RTF1-201ENST00000389629 ERGIC2Q96RQ1 377 aa15.4■□□□□ 0.06
RTF1-201ENST00000389629 CDC37Q16543 378 aaPredicted RBP15.4■□□□□ 0.06
RTF1-201ENST00000389629 ZBTB10Q96DT7 871 aa15.4■□□□□ 0.06
RTF1-201ENST00000389629 C7orf25Q9BPX7 421 aa15.4■□□□□ 0.06
RTF1-201ENST00000389629 RABGAP1Q9Y3P9 1069 aa15.4■□□□□ 0.06
RTF1-201ENST00000389629 MYMKA6NI61 221 aa15.4■□□□□ 0.06
RTF1-201ENST00000389629 ATF7P17544 494 aaPredicted RBP15.4■□□□□ 0.06
RTF1-201ENST00000389629 COG7P83436 770 aa15.4■□□□□ 0.06
RTF1-201ENST00000389629 MKRN4PQ13434 485 aaPredicted RBP15.4■□□□□ 0.06
RTF1-201ENST00000389629 PPP1R21Q6ZMI0 780 aa15.4■□□□□ 0.06
RTF1-201ENST00000389629 PDE2AO00408 941 aaPredicted RBP15.39■□□□□ 0.05
RTF1-201ENST00000389629 ASPRV1Q53RT3 343 aa15.39■□□□□ 0.05
RTF1-201ENST00000389629 CELF1Q92879 486 aaKnown RBP15.39■□□□□ 0.05
RTF1-201ENST00000389629 TYW1Q9NV66 732 aaKnown RBP15.39■□□□□ 0.05
RTF1-201ENST00000389629 ANAPC5Q9UJX4 755 aa15.39■□□□□ 0.05
RTF1-201ENST00000389629 SSU72P8A0A1W2PR75 194 aa15.39■□□□□ 0.05
RTF1-201ENST00000389629 SFI1A8K8P3 1242 aa15.39■□□□□ 0.05
RTF1-201ENST00000389629 RPS6KA5O75582 802 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms