RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 FBXO42Q6P3S6 717 aa2.62□□□□□ -1.99
SNORA40-201ENST00000388090 LRP10Q7Z4F1 713 aa2.62□□□□□ -1.99
SNORA40-201ENST00000388090 ANKRD35Q8N283 1001 aa2.62□□□□□ -1.99
SNORA40-201ENST00000388090 SHCBP1Q8NEM2 672 aa2.62□□□□□ -1.99
SNORA40-201ENST00000388090 PROKR1Q8TCW9 393 aa2.62□□□□□ -1.99
SNORA40-201ENST00000388090 ANKS1AQ92625 1134 aa2.62□□□□□ -1.99
SNORA40-201ENST00000388090 LGR4Q9BXB1 951 aa2.62□□□□□ -1.99
SNORA40-201ENST00000388090 OR10A2Q9H208 303 aa2.62□□□□□ -1.99
SNORA40-201ENST00000388090 TESQ9UGI8 421 aaKnown RBP2.62□□□□□ -1.99
SNORA40-201ENST00000388090 TRPS1Q9UHF7 1281 aa2.62□□□□□ -1.99
SNORA40-201ENST00000388090 ACOT7O00154 380 aa2.61□□□□□ -1.99
SNORA40-201ENST00000388090 B3GALT2O43825 422 aa2.61□□□□□ -1.99
SNORA40-201ENST00000388090 SCG5P05408 212 aa2.61□□□□□ -1.99
SNORA40-201ENST00000388090 ITGB1P05556 798 aa2.61□□□□□ -1.99
SNORA40-201ENST00000388090 MAN2A2P49641 1150 aa2.61□□□□□ -1.99
SNORA40-201ENST00000388090 KCNQ1P51787 676 aa2.61□□□□□ -1.99
SNORA40-201ENST00000388090 FOXF2Q12947 444 aa2.61□□□□□ -1.99
SNORA40-201ENST00000388090 EIF4HQ15056 248 aaKnown RBP2.61□□□□□ -1.99
SNORA40-201ENST00000388090 PTPAQ15257 358 aa2.61□□□□□ -1.99
SNORA40-201ENST00000388090 RABL3Q5HYI8 236 aa2.61□□□□□ -1.99
SNORA40-201ENST00000388090 LY6G5CQ5SRR4 150 aa2.61□□□□□ -1.99
SNORA40-201ENST00000388090 DENND5AQ6IQ26 1287 aa2.61□□□□□ -1.99
SNORA40-201ENST00000388090 DPP8Q6V1X1 898 aaPredicted RBP2.61□□□□□ -1.99
SNORA40-201ENST00000388090 ZNF662Q6ZS27 426 aa2.61□□□□□ -1.99
SNORA40-201ENST00000388090 ZNF276Q8N554 614 aa2.61□□□□□ -1.99
SNORA40-201ENST00000388090 ZNF366Q8N895 744 aa2.61□□□□□ -1.99
SNORA40-201ENST00000388090 C19orf47Q8N9M1 422 aaKnown RBP2.61□□□□□ -1.99
SNORA40-201ENST00000388090 OR14K1Q8NGZ2 314 aa2.61□□□□□ -1.99
SNORA40-201ENST00000388090 THAP3Q8WTV1 239 aaPredicted RBP2.61□□□□□ -1.99
SNORA40-201ENST00000388090 MIEF2Q96C03 454 aa2.61□□□□□ -1.99
SNORA40-201ENST00000388090 JAM3Q9BX67 310 aa2.61□□□□□ -1.99
SNORA40-201ENST00000388090 SLC39A2Q9NP94 309 aa2.61□□□□□ -1.99
SNORA40-201ENST00000388090 FZD1Q9UP38 647 aa2.61□□□□□ -1.99
SNORA40-201ENST00000388090 COL11A2P13942 1736 aaPredicted RBP2.61□□□□□ -1.99
SNORA40-201ENST00000388090 XDHP47989 1333 aa2.61□□□□□ -1.99
SNORA40-201ENST00000388090 SPATA31A6Q5VVP1 1343 aa2.61□□□□□ -1.99
SNORA40-201ENST00000388090 SETD1BQ9UPS6 1966 aaKnown RBP2.6□□□□□ -1.99
SNORA40-201ENST00000388090 MYADML2A6NDP7 307 aa2.6□□□□□ -1.99
SNORA40-201ENST00000388090 NOP56O00567 594 aaKnown RBP2.6□□□□□ -1.99
SNORA40-201ENST00000388090 TBX1O43435 398 aa2.6□□□□□ -1.99
SNORA40-201ENST00000388090 ABHD16AO95870 558 aa2.6□□□□□ -1.99
SNORA40-201ENST00000388090 ITGAVP06756 1048 aa2.6□□□□□ -1.99
SNORA40-201ENST00000388090 HOXB6P17509 224 aaKnown RBP2.6□□□□□ -1.99
SNORA40-201ENST00000388090 MRE11P49959 708 aa2.6□□□□□ -1.99
SNORA40-201ENST00000388090 SAFB2Q14151 953 aaKnown RBP eCLIP2.6□□□□□ -1.99
SNORA40-201ENST00000388090 PRSS53Q2L4Q9 553 aa2.6□□□□□ -1.99
SNORA40-201ENST00000388090 WDR72Q3MJ13 1102 aa2.6□□□□□ -1.99
SNORA40-201ENST00000388090 PRR16Q569H4 304 aa2.6□□□□□ -1.99
SNORA40-201ENST00000388090 KIAA1211LQ6NV74 962 aa2.6□□□□□ -1.99
SNORA40-201ENST00000388090 HDGFL2Q7Z4V5 671 aaPredicted RBP2.6□□□□□ -1.99
SNORA40-201ENST00000388090 FAM98AQ8NCA5 519 aaKnown RBP2.6□□□□□ -1.99
SNORA40-201ENST00000388090 UHMK1Q8TAS1 419 aaKnown RBP2.6□□□□□ -1.99
SNORA40-201ENST00000388090 BTN2A2Q8WVV5 523 aa2.6□□□□□ -1.99
SNORA40-201ENST00000388090 KLRG2A4D1S0 409 aaPredicted RBP2.59□□□□□ -1.99
SNORA40-201ENST00000388090 GRXCR1A8MXD5 290 aa2.59□□□□□ -1.99
SNORA40-201ENST00000388090 HOXC12P31275 282 aa2.59□□□□□ -1.99
SNORA40-201ENST00000388090 ECI1P42126 302 aa2.59□□□□□ -1.99
SNORA40-201ENST00000388090 RABGGTBP53611 331 aa2.59□□□□□ -1.99
SNORA40-201ENST00000388090 EPHA5P54756 1037 aa2.59□□□□□ -1.99
SNORA40-201ENST00000388090 IL13RA1P78552 427 aa2.59□□□□□ -1.99
SNORA40-201ENST00000388090 DBPQ10586 325 aaPredicted RBP2.59□□□□□ -1.99
SNORA40-201ENST00000388090 RIN1Q13671 783 aa2.59□□□□□ -1.99
SNORA40-201ENST00000388090 SF1Q15637 639 aaKnown RBP2.59□□□□□ -1.99
SNORA40-201ENST00000388090 NBPF6Q5VWK0 638 aa2.59□□□□□ -1.99
SNORA40-201ENST00000388090 CCDC81Q6ZN84 652 aa2.59□□□□□ -1.99
SNORA40-201ENST00000388090 LRRC55Q6ZSA7 311 aa2.59□□□□□ -1.99
SNORA40-201ENST00000388090 OTOP3Q7RTS5 596 aa2.59□□□□□ -1.99
SNORA40-201ENST00000388090 C1QL2Q7Z5L3 287 aa2.59□□□□□ -1.99
SNORA40-201ENST00000388090 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.59□□□□□ -1.99
SNORA40-201ENST00000388090 FILIP1Q7Z7B0 1213 aa2.59□□□□□ -1.99
SNORA40-201ENST00000388090 PPIL6Q8IXY8 311 aa2.59□□□□□ -1.99
SNORA40-201ENST00000388090 SYNE4Q8N205 404 aa2.59□□□□□ -1.99
SNORA40-201ENST00000388090 SMG7Q92540 1137 aaKnown RBP2.59□□□□□ -1.99
SNORA40-201ENST00000388090 NBPF4Q96M43 638 aa2.59□□□□□ -1.99
SNORA40-201ENST00000388090 APBA2Q99767 749 aa2.59□□□□□ -1.99
SNORA40-201ENST00000388090 GPR87Q9BY21 358 aa2.59□□□□□ -1.99
SNORA40-201ENST00000388090 PPARGC1AQ9UBK2 798 aaKnown RBP2.59□□□□□ -1.99
SNORA40-201ENST00000388090 CDC42EP3Q9UKI2 254 aa2.59□□□□□ -1.99
SNORA40-201ENST00000388090 NPFFR2Q9Y5X5 522 aa2.59□□□□□ -1.99
SNORA40-201ENST00000388090 DNAJC9-AS1A6NH13 148 aa2.58□□□□□ -2
SNORA40-201ENST00000388090 SNRPB2P08579 225 aaKnown RBP2.58□□□□□ -2
SNORA40-201ENST00000388090 TYRP1P17643 537 aa2.58□□□□□ -2
SNORA40-201ENST00000388090 ZFP36P26651 326 aaKnown RBP2.58□□□□□ -2
SNORA40-201ENST00000388090 ADCY8P40145 1251 aa2.58□□□□□ -2
SNORA40-201ENST00000388090 HABP4Q5JVS0 413 aaKnown RBP2.58□□□□□ -2
SNORA40-201ENST00000388090 SP5Q6BEB4 398 aaPredicted RBP2.58□□□□□ -2
SNORA40-201ENST00000388090 KCNV1Q6PIU1 500 aa2.58□□□□□ -2
SNORA40-201ENST00000388090 Q6YL49 198 aa2.58□□□□□ -2
SNORA40-201ENST00000388090 HTR3DQ70Z44 454 aa2.58□□□□□ -2
SNORA40-201ENST00000388090 CXXC5Q7LFL8 322 aaKnown RBP2.58□□□□□ -2
SNORA40-201ENST00000388090 ZC3H7AQ8IWR0 971 aaKnown RBP2.58□□□□□ -2
SNORA40-201ENST00000388090 C1orf159Q96HA4 380 aa2.58□□□□□ -2
SNORA40-201ENST00000388090 RSAD1Q9HA92 442 aa2.58□□□□□ -2
SNORA40-201ENST00000388090 FBXO10Q9UK96 956 aa2.58□□□□□ -2
SNORA40-201ENST00000388090 NKRFO15226 690 aaKnown RBP eCLIP2.57□□□□□ -2
SNORA40-201ENST00000388090 PTH2RP49190 550 aa2.57□□□□□ -2
SNORA40-201ENST00000388090 ZNF143P52747 638 aaPredicted RBP2.57□□□□□ -2
SNORA40-201ENST00000388090 TAP1Q03518 808 aa2.57□□□□□ -2
SNORA40-201ENST00000388090 KCNA1Q09470 495 aa2.57□□□□□ -2
SNORA40-201ENST00000388090 STILQ15468 1287 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms