RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 C1orf162Q8NEQ5 155 aaPredicted RBP7.15□□□□□ -1.26
RNU6-40P-201ENST00000384254 ASB15Q8WXK1 588 aa7.15□□□□□ -1.26
RNU6-40P-201ENST00000384254 C16orf92Q96LL3 132 aa7.15□□□□□ -1.26
RNU6-40P-201ENST00000384254 SLC13A1Q9BZW2 595 aa7.15□□□□□ -1.26
RNU6-40P-201ENST00000384254 GEMIN8Q9NWZ8 242 aaKnown RBP7.15□□□□□ -1.26
RNU6-40P-201ENST00000384254 FAN1Q9Y2M0 1017 aa7.15□□□□□ -1.26
RNU6-40P-201ENST00000384254 ASB1Q9Y576 335 aa7.15□□□□□ -1.26
RNU6-40P-201ENST00000384254 ST20-MTHFSA0A0A6YYL1 179 aa7.14□□□□□ -1.27
RNU6-40P-201ENST00000384254 XPOTO43592 962 aaKnown RBP7.14□□□□□ -1.27
RNU6-40P-201ENST00000384254 HYAL3O43820 417 aaPredicted RBP7.14□□□□□ -1.27
RNU6-40P-201ENST00000384254 TMEM253P0C7T8 217 aa7.14□□□□□ -1.27
RNU6-40P-201ENST00000384254 RECQLP46063 649 aaPredicted RBP7.14□□□□□ -1.27
RNU6-40P-201ENST00000384254 KCNMB1Q16558 191 aa7.14□□□□□ -1.27
RNU6-40P-201ENST00000384254 TTC38Q5R3I4 469 aa7.14□□□□□ -1.27
RNU6-40P-201ENST00000384254 AMIGO3Q86WK7 504 aa7.14□□□□□ -1.27
RNU6-40P-201ENST00000384254 IRF2BP1Q8IU81 584 aa7.14□□□□□ -1.27
RNU6-40P-201ENST00000384254 WDR48Q8TAF3 677 aa7.14□□□□□ -1.27
RNU6-40P-201ENST00000384254 FAXDC2Q96IV6 333 aa7.14□□□□□ -1.27
RNU6-40P-201ENST00000384254 C8orf48Q96LL4 319 aa7.14□□□□□ -1.27
RNU6-40P-201ENST00000384254 CAMKK2Q96RR4 588 aa7.14□□□□□ -1.27
RNU6-40P-201ENST00000384254 TUBGCP5Q96RT8 1024 aa7.14□□□□□ -1.27
RNU6-40P-201ENST00000384254 CDH19Q9H159 772 aa7.14□□□□□ -1.27
RNU6-40P-201ENST00000384254 MS4A5Q9H3V2 200 aa7.14□□□□□ -1.27
RNU6-40P-201ENST00000384254 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.13□□□□□ -1.27
RNU6-40P-201ENST00000384254 GOLGA6CA6NDK9 693 aa7.13□□□□□ -1.27
RNU6-40P-201ENST00000384254 GOLGA6BA6NDN3 693 aa7.13□□□□□ -1.27
RNU6-40P-201ENST00000384254 ACOT7O00154 380 aa7.13□□□□□ -1.27
RNU6-40P-201ENST00000384254 APOL3O95236 402 aa7.13□□□□□ -1.27
RNU6-40P-201ENST00000384254 GLI1P08151 1106 aa7.13□□□□□ -1.27
RNU6-40P-201ENST00000384254 GOLGA6DP0CG33 693 aa7.13□□□□□ -1.27
RNU6-40P-201ENST00000384254 U2AF1L5P0DN76 240 aaPredicted RBP7.13□□□□□ -1.27
RNU6-40P-201ENST00000384254 NKX3-2P78367 333 aa7.13□□□□□ -1.27
RNU6-40P-201ENST00000384254 KRT85P78386 507 aa7.13□□□□□ -1.27
RNU6-40P-201ENST00000384254 U2AF1Q01081 240 aaKnown RBP eCLIP7.13□□□□□ -1.27
RNU6-40P-201ENST00000384254 ACAP2Q15057 778 aa7.13□□□□□ -1.27
RNU6-40P-201ENST00000384254 INAVAQ3KP66 663 aa7.13□□□□□ -1.27
RNU6-40P-201ENST00000384254 TMC6Q7Z403 805 aa7.13□□□□□ -1.27
RNU6-40P-201ENST00000384254 ZSWIM9Q86XI8 627 aa7.13□□□□□ -1.27
RNU6-40P-201ENST00000384254 MYO1HQ8N1T3 1032 aa7.13□□□□□ -1.27
RNU6-40P-201ENST00000384254 LMBR1Q8WVP7 490 aa7.13□□□□□ -1.27
RNU6-40P-201ENST00000384254 TSR2Q969E8 191 aaKnown RBP7.13□□□□□ -1.27
RNU6-40P-201ENST00000384254 RELTQ969Z4 430 aa7.13□□□□□ -1.27
RNU6-40P-201ENST00000384254 GOLGA6AQ9NYA3 693 aa7.13□□□□□ -1.27
RNU6-40P-201ENST00000384254 IP6K2Q9UHH9 426 aa7.13□□□□□ -1.27
RNU6-40P-201ENST00000384254 INVSQ9Y283 1065 aa7.13□□□□□ -1.27
RNU6-40P-201ENST00000384254 PRAMEF22A3QJZ6 481 aa7.12□□□□□ -1.27
RNU6-40P-201ENST00000384254 KLHL33A6NCF5 533 aa7.12□□□□□ -1.27
RNU6-40P-201ENST00000384254 RASSF10A6NK89 507 aa7.12□□□□□ -1.27
RNU6-40P-201ENST00000384254 RBP3P10745 1247 aa7.12□□□□□ -1.27
RNU6-40P-201ENST00000384254 ZSCAN20P17040 1043 aaPredicted RBP7.12□□□□□ -1.27
RNU6-40P-201ENST00000384254 ATF3P18847 181 aa7.12□□□□□ -1.27
RNU6-40P-201ENST00000384254 AOAHP28039 575 aa7.12□□□□□ -1.27
RNU6-40P-201ENST00000384254 ROM1Q03395 351 aa7.12□□□□□ -1.27
RNU6-40P-201ENST00000384254 DBPQ10586 325 aaPredicted RBP7.12□□□□□ -1.27
RNU6-40P-201ENST00000384254 PRAMEF18Q5VWM3 479 aa7.12□□□□□ -1.27
RNU6-40P-201ENST00000384254 PRAMEF9Q5VWM5 478 aa7.12□□□□□ -1.27
RNU6-40P-201ENST00000384254 FYB2Q5VWT5 728 aa7.12□□□□□ -1.27
RNU6-40P-201ENST00000384254 VASNQ6EMK4 673 aa7.12□□□□□ -1.27
RNU6-40P-201ENST00000384254 MPZL3Q6UWV2 235 aa7.12□□□□□ -1.27
RNU6-40P-201ENST00000384254 CXorf67Q86X51 503 aaPredicted RBP7.12□□□□□ -1.27
RNU6-40P-201ENST00000384254 MIB1Q86YT6 1006 aa7.12□□□□□ -1.27
RNU6-40P-201ENST00000384254 CALML6Q8TD86 181 aa7.12□□□□□ -1.27
RNU6-40P-201ENST00000384254 JPH3Q8WXH2 748 aaPredicted RBP7.12□□□□□ -1.27
RNU6-40P-201ENST00000384254 POFUT1Q9H488 388 aa7.12□□□□□ -1.27
RNU6-40P-201ENST00000384254 DNAJC28Q9NX36 388 aa7.12□□□□□ -1.27
RNU6-40P-201ENST00000384254 KLHL14Q9P2G3 628 aa7.12□□□□□ -1.27
RNU6-40P-201ENST00000384254 LCHNA4D1U4 455 aa7.11□□□□□ -1.27
RNU6-40P-201ENST00000384254 TRIM75PA6NK02 468 aa7.11□□□□□ -1.27
RNU6-40P-201ENST00000384254 MAFGO15525 162 aa7.11□□□□□ -1.27
RNU6-40P-201ENST00000384254 PRC1O43663 620 aa7.11□□□□□ -1.27
RNU6-40P-201ENST00000384254 ENO2P09104 434 aaPredicted RBP7.11□□□□□ -1.27
RNU6-40P-201ENST00000384254 VCAM1P19320 739 aa7.11□□□□□ -1.27
RNU6-40P-201ENST00000384254 ENPP1P22413 925 aa7.11□□□□□ -1.27
RNU6-40P-201ENST00000384254 LRRC41Q15345 812 aa7.11□□□□□ -1.27
RNU6-40P-201ENST00000384254 PCBP2Q15366 365 aaKnown RBP eCLIP7.11□□□□□ -1.27
RNU6-40P-201ENST00000384254 FSCN1Q16658 493 aaKnown RBP7.11□□□□□ -1.27
RNU6-40P-201ENST00000384254 UGT8Q16880 541 aa7.11□□□□□ -1.27
RNU6-40P-201ENST00000384254 EFCAB2Q5VUJ9 269 aa7.11□□□□□ -1.27
RNU6-40P-201ENST00000384254 CD276Q5ZPR3 534 aa7.11□□□□□ -1.27
RNU6-40P-201ENST00000384254 SLFN12LQ6IEE8 588 aa7.11□□□□□ -1.27
RNU6-40P-201ENST00000384254 TEPPQ6URK8 271 aa7.11□□□□□ -1.27
RNU6-40P-201ENST00000384254 CILP2Q8IUL8 1156 aa7.11□□□□□ -1.27
RNU6-40P-201ENST00000384254 TGFBRAP1Q8WUH2 860 aa7.11□□□□□ -1.27
RNU6-40P-201ENST00000384254 RPGRQ92834 1020 aaKnown RBP7.11□□□□□ -1.27
RNU6-40P-201ENST00000384254 ZNF496Q96IT1 587 aaPredicted RBP7.11□□□□□ -1.27
RNU6-40P-201ENST00000384254 MAML3Q96JK9 1138 aa7.11□□□□□ -1.27
RNU6-40P-201ENST00000384254 WNT8AQ9H1J5 351 aa7.11□□□□□ -1.27
RNU6-40P-201ENST00000384254 BCAS3Q9H6U6 928 aa7.11□□□□□ -1.27
RNU6-40P-201ENST00000384254 CCM2LQ9NUG4 571 aaPredicted RBP7.11□□□□□ -1.27
RNU6-40P-201ENST00000384254 NOB1Q9ULX3 412 aaKnown RBP7.11□□□□□ -1.27
RNU6-40P-201ENST00000384254 ANKRD6Q9Y2G4 727 aa7.11□□□□□ -1.27
RNU6-40P-201ENST00000384254 GIT1Q9Y2X7 761 aa7.11□□□□□ -1.27
RNU6-40P-201ENST00000384254 HCFC2Q9Y5Z7 792 aa7.11□□□□□ -1.27
RNU6-40P-201ENST00000384254 GOLGA6L22H0YM25 854 aa7.1□□□□□ -1.27
RNU6-40P-201ENST00000384254 HRKO00198 91 aa7.1□□□□□ -1.27
RNU6-40P-201ENST00000384254 KIF3BO15066 747 aa7.1□□□□□ -1.27
RNU6-40P-201ENST00000384254 RFPL1O75677 317 aa7.1□□□□□ -1.27
RNU6-40P-201ENST00000384254 ABLIM3O94929 683 aa7.1□□□□□ -1.27
RNU6-40P-201ENST00000384254 MTHFD2P13995 350 aa7.1□□□□□ -1.27
RNU6-40P-201ENST00000384254 PTGS1P23219 599 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms