RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 INCENPQ9NQS7 918 aa4.15□□□□□ -1.75
RNU6-1040P-201ENST00000383974 CBLCQ9ULV8 474 aa4.15□□□□□ -1.75
RNU6-1040P-201ENST00000383974 PCDHA8Q9Y5H6 950 aa4.15□□□□□ -1.75
RNU6-1040P-201ENST00000383974 ATP23Q9Y6H3 246 aa4.15□□□□□ -1.75
RNU6-1040P-201ENST00000383974 AQP7O14520 342 aa4.14□□□□□ -1.75
RNU6-1040P-201ENST00000383974 ADCY3O60266 1144 aa4.14□□□□□ -1.75
RNU6-1040P-201ENST00000383974 KRT15P19012 456 aa4.14□□□□□ -1.75
RNU6-1040P-201ENST00000383974 AOAHP28039 575 aa4.14□□□□□ -1.75
RNU6-1040P-201ENST00000383974 KCNQ1P51787 676 aa4.14□□□□□ -1.75
RNU6-1040P-201ENST00000383974 DGCR2P98153 550 aa4.14□□□□□ -1.75
RNU6-1040P-201ENST00000383974 ABHD18Q0P651 414 aa4.14□□□□□ -1.75
RNU6-1040P-201ENST00000383974 LARP4Q71RC2 724 aaKnown RBP eCLIP4.14□□□□□ -1.75
RNU6-1040P-201ENST00000383974 MAMDC2Q7Z304 686 aaPredicted RBP4.14□□□□□ -1.75
RNU6-1040P-201ENST00000383974 OSTM1Q86WC4 334 aa4.14□□□□□ -1.75
RNU6-1040P-201ENST00000383974 SLC43A3Q8NBI5 491 aa4.14□□□□□ -1.75
RNU6-1040P-201ENST00000383974 PCDH19Q8TAB3 1148 aa4.14□□□□□ -1.75
RNU6-1040P-201ENST00000383974 CFHR4Q92496 578 aa4.14□□□□□ -1.75
RNU6-1040P-201ENST00000383974 FBXW5Q969U6 566 aa4.14□□□□□ -1.75
RNU6-1040P-201ENST00000383974 SCYL1Q96KG9 808 aa4.14□□□□□ -1.75
RNU6-1040P-201ENST00000383974 TRIM55Q9BYV6 548 aa4.14□□□□□ -1.75
RNU6-1040P-201ENST00000383974 C12orf65Q9H3J6 166 aaKnown RBP4.14□□□□□ -1.75
RNU6-1040P-201ENST00000383974 CATSPERZQ9NTU4 200 aa4.14□□□□□ -1.75
RNU6-1040P-201ENST00000383974 BTBD7Q9P203 1132 aa4.14□□□□□ -1.75
RNU6-1040P-201ENST00000383974 PRAMEF25A6NGN4 478 aa4.13□□□□□ -1.75
RNU6-1040P-201ENST00000383974 ZNF561-AS1K7EIQ3 104 aa4.13□□□□□ -1.75
RNU6-1040P-201ENST00000383974 ARVCFO00192 962 aa4.13□□□□□ -1.75
RNU6-1040P-201ENST00000383974 KCNK3O14649 394 aa4.13□□□□□ -1.75
RNU6-1040P-201ENST00000383974 PLSCR1O15162 318 aa4.13□□□□□ -1.75
RNU6-1040P-201ENST00000383974 ARHGAP6O43182 974 aa4.13□□□□□ -1.75
RNU6-1040P-201ENST00000383974 NARSO43776 548 aaKnown RBP4.13□□□□□ -1.75
RNU6-1040P-201ENST00000383974 C4BPAP04003 597 aaKnown RBP4.13□□□□□ -1.75
RNU6-1040P-201ENST00000383974 C6orf222P0C671 652 aaPredicted RBP4.13□□□□□ -1.75
RNU6-1040P-201ENST00000383974 GJA4P35212 333 aa4.13□□□□□ -1.75
RNU6-1040P-201ENST00000383974 JAM2P57087 298 aa4.13□□□□□ -1.75
RNU6-1040P-201ENST00000383974 NFYCQ13952 458 aa4.13□□□□□ -1.75
RNU6-1040P-201ENST00000383974 STILQ15468 1287 aa4.13□□□□□ -1.75
RNU6-1040P-201ENST00000383974 FOXB2Q5VYV0 432 aa4.13□□□□□ -1.75
RNU6-1040P-201ENST00000383974 MAMDC4Q6UXC1 1216 aa4.13□□□□□ -1.75
RNU6-1040P-201ENST00000383974 C1orf210Q8IVY1 113 aa4.13□□□□□ -1.75
RNU6-1040P-201ENST00000383974 ZNF808Q8N4W9 903 aaPredicted RBP4.13□□□□□ -1.75
RNU6-1040P-201ENST00000383974 PTPRN2Q92932 1015 aa4.13□□□□□ -1.75
RNU6-1040P-201ENST00000383974 FAM89AQ96GI7 184 aa4.13□□□□□ -1.75
RNU6-1040P-201ENST00000383974 GALNT8Q9NY28 637 aa4.13□□□□□ -1.75
RNU6-1040P-201ENST00000383974 FBXO10Q9UK96 956 aa4.13□□□□□ -1.75
RNU6-1040P-201ENST00000383974 CDC42EP3Q9UKI2 254 aa4.13□□□□□ -1.75
RNU6-1040P-201ENST00000383974 MSRB2Q9Y3D2 182 aa4.13□□□□□ -1.75
RNU6-1040P-201ENST00000383974 TRBV23-1A0A0A0MS06 115 aa4.12□□□□□ -1.75
RNU6-1040P-201ENST00000383974 C1SP09871 688 aa4.12□□□□□ -1.75
RNU6-1040P-201ENST00000383974 SRGAP2CP0DJJ0 459 aa4.12□□□□□ -1.75
RNU6-1040P-201ENST00000383974 ACRV1P26436 265 aa4.12□□□□□ -1.75
RNU6-1040P-201ENST00000383974 TGFB2P61812 414 aa4.12□□□□□ -1.75
RNU6-1040P-201ENST00000383974 SUMO1P63165 101 aaKnown RBP4.12□□□□□ -1.75
RNU6-1040P-201ENST00000383974 ST5P78524 1137 aa4.12□□□□□ -1.75
RNU6-1040P-201ENST00000383974 GUCY1A3Q02108 690 aa4.12□□□□□ -1.75
RNU6-1040P-201ENST00000383974 LSM12Q3MHD2 195 aaKnown RBP4.12□□□□□ -1.75
RNU6-1040P-201ENST00000383974 FAM209AQ5JX71 171 aa4.12□□□□□ -1.75
RNU6-1040P-201ENST00000383974 EP400NLQ6ZTU2 488 aa4.12□□□□□ -1.75
RNU6-1040P-201ENST00000383974 USP30Q70CQ3 517 aa4.12□□□□□ -1.75
RNU6-1040P-201ENST00000383974 CXXC5Q7LFL8 322 aaKnown RBP4.12□□□□□ -1.75
RNU6-1040P-201ENST00000383974 OTOP2Q7RTS6 562 aa4.12□□□□□ -1.75
RNU6-1040P-201ENST00000383974 SCUBE1Q8IWY4 988 aa4.12□□□□□ -1.75
RNU6-1040P-201ENST00000383974 HOMEZQ8IX15 550 aa4.12□□□□□ -1.75
RNU6-1040P-201ENST00000383974 IL17DQ8TAD2 202 aa4.12□□□□□ -1.75
RNU6-1040P-201ENST00000383974 ZNF428Q96B54 188 aa4.12□□□□□ -1.75
RNU6-1040P-201ENST00000383974 WNK4Q96J92 1243 aa4.12□□□□□ -1.75
RNU6-1040P-201ENST00000383974 CDC6Q99741 560 aa4.12□□□□□ -1.75
RNU6-1040P-201ENST00000383974 SMURF1Q9HCE7 757 aa4.12□□□□□ -1.75
RNU6-1040P-201ENST00000383974 PFDN2Q9UHV9 154 aa4.12□□□□□ -1.75
RNU6-1040P-201ENST00000383974 PUF60Q9UHX1 559 aaKnown RBP4.12□□□□□ -1.75
RNU6-1040P-201ENST00000383974 CCDC66A2RUB6 948 aa4.11□□□□□ -1.75
RNU6-1040P-201ENST00000383974 PDPK1O15530 556 aa4.11□□□□□ -1.75
RNU6-1040P-201ENST00000383974 MPIG6BO95866 241 aa4.11□□□□□ -1.75
RNU6-1040P-201ENST00000383974 MCM7P33993 719 aa4.11□□□□□ -1.75
RNU6-1040P-201ENST00000383974 MSX2P35548 267 aaPredicted RBP4.11□□□□□ -1.75
RNU6-1040P-201ENST00000383974 RPS19P39019 145 aaKnown RBP4.11□□□□□ -1.75
RNU6-1040P-201ENST00000383974 HERVK_113P62684 666 aa4.11□□□□□ -1.75
RNU6-1040P-201ENST00000383974 SSRP1Q08945 709 aaKnown RBP4.11□□□□□ -1.75
RNU6-1040P-201ENST00000383974 FOXL1Q12952 345 aa4.11□□□□□ -1.75
RNU6-1040P-201ENST00000383974 EIF4HQ15056 248 aaKnown RBP4.11□□□□□ -1.75
RNU6-1040P-201ENST00000383974 PCOLCEQ15113 449 aa4.11□□□□□ -1.75
RNU6-1040P-201ENST00000383974 SEC23AQ15436 765 aa4.11□□□□□ -1.75
RNU6-1040P-201ENST00000383974 CRY1Q16526 586 aa4.11□□□□□ -1.75
RNU6-1040P-201ENST00000383974 MTERF2Q49AM1 385 aa4.11□□□□□ -1.75
RNU6-1040P-201ENST00000383974 FAM47CQ5HY64 1035 aa4.11□□□□□ -1.75
RNU6-1040P-201ENST00000383974 KANK2Q63ZY3 851 aa4.11□□□□□ -1.75
RNU6-1040P-201ENST00000383974 TRIM68Q6AZZ1 485 aa4.11□□□□□ -1.75
RNU6-1040P-201ENST00000383974 FSTL4Q6MZW2 842 aa4.11□□□□□ -1.75
RNU6-1040P-201ENST00000383974 LRSAM1Q6UWE0 723 aa4.11□□□□□ -1.75
RNU6-1040P-201ENST00000383974 C16orf59Q7L2K0 433 aa4.11□□□□□ -1.75
RNU6-1040P-201ENST00000383974 FILIP1Q7Z7B0 1213 aa4.11□□□□□ -1.75
RNU6-1040P-201ENST00000383974 CACTINQ8WUQ7 758 aaKnown RBP4.11□□□□□ -1.75
RNU6-1040P-201ENST00000383974 EXOC2Q96KP1 924 aa4.11□□□□□ -1.75
RNU6-1040P-201ENST00000383974 PLEKHG4BQ96PX9 1271 aa4.11□□□□□ -1.75
RNU6-1040P-201ENST00000383974 BTBD2Q9BX70 525 aa4.11□□□□□ -1.75
RNU6-1040P-201ENST00000383974 AMNQ9BXJ7 453 aa4.11□□□□□ -1.75
RNU6-1040P-201ENST00000383974 TRIM8Q9BZR9 551 aa4.11□□□□□ -1.75
RNU6-1040P-201ENST00000383974 TLR9Q9NR96 1032 aa4.11□□□□□ -1.75
RNU6-1040P-201ENST00000383974 UCKL1Q9NWZ5 548 aa4.11□□□□□ -1.75
RNU6-1040P-201ENST00000383974 PCDHA9Q9Y5H5 950 aa4.11□□□□□ -1.75
RNU6-1040P-201ENST00000383974 CCDC85CA6NKD9 419 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms