RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 IQCKQ8N0W5 287 aa9.81□□□□□ -0.84
GPNMB-202ENST00000381990 EIF1ADQ8N9N8 165 aaKnown RBP9.81□□□□□ -0.84
GPNMB-202ENST00000381990 C3orf20Q8ND61 904 aa9.81□□□□□ -0.84
GPNMB-202ENST00000381990 HDAC7Q8WUI4 952 aa9.81□□□□□ -0.84
GPNMB-202ENST00000381990 DUSP9Q99956 384 aaKnown RBP9.81□□□□□ -0.84
GPNMB-202ENST00000381990 VCPKMTQ9H867 229 aa9.81□□□□□ -0.84
GPNMB-202ENST00000381990 CAPN7Q9Y6W3 813 aa9.81□□□□□ -0.84
GPNMB-202ENST00000381990 LOC102724159A0A0B4J2E5 919 aa9.81□□□□□ -0.84
GPNMB-202ENST00000381990 HMGB1P1B2RPK0 211 aaPredicted RBP9.81□□□□□ -0.84
GPNMB-202ENST00000381990 PLA2G6O60733 806 aa9.81□□□□□ -0.84
GPNMB-202ENST00000381990 FOSP01100 380 aaPredicted RBP9.81□□□□□ -0.84
GPNMB-202ENST00000381990 LSP1P33241 339 aa9.81□□□□□ -0.84
GPNMB-202ENST00000381990 MTIF2P46199 727 aaKnown RBP9.81□□□□□ -0.84
GPNMB-202ENST00000381990 KIF11P52732 1056 aa9.81□□□□□ -0.84
GPNMB-202ENST00000381990 PWP2Q15269 919 aaKnown RBP9.81□□□□□ -0.84
GPNMB-202ENST00000381990 USH1GQ495M9 461 aa9.81□□□□□ -0.84
GPNMB-202ENST00000381990 MIIPQ5JXC2 388 aa9.81□□□□□ -0.84
GPNMB-202ENST00000381990 FAM83BQ5T0W9 1011 aa9.81□□□□□ -0.84
GPNMB-202ENST00000381990 CFAP58Q5T655 872 aa9.81□□□□□ -0.84
GPNMB-202ENST00000381990 TSEN2Q8NCE0 465 aaKnown RBP9.81□□□□□ -0.84
GPNMB-202ENST00000381990 WHAMMQ8TF30 809 aa9.81□□□□□ -0.84
GPNMB-202ENST00000381990 LRRC15Q8TF66 581 aa9.81□□□□□ -0.84
GPNMB-202ENST00000381990 CHURC1Q8WUH1 139 aa9.81□□□□□ -0.84
GPNMB-202ENST00000381990 ARL8AQ96BM9 186 aa9.81□□□□□ -0.84
GPNMB-202ENST00000381990 ZIM3Q96PE6 472 aa9.81□□□□□ -0.84
GPNMB-202ENST00000381990 GDF3Q9NR23 364 aa9.81□□□□□ -0.84
GPNMB-202ENST00000381990 STK17AQ9UEE5 414 aa9.81□□□□□ -0.84
GPNMB-202ENST00000381990 CYP3A7-CYP3A51PA0A087WV96 503 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 GRID2IPA4D2P6 1211 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 FZD9O00144 591 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 CYP3A7P24462 503 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 PTGER2P43116 358 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 GMPSP49915 693 aaPredicted RBP9.8□□□□□ -0.84
GPNMB-202ENST00000381990 NAP1L1P55209 391 aaKnown RBP9.8□□□□□ -0.84
GPNMB-202ENST00000381990 AMPD3Q01432 767 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 PDCLQ13371 301 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 CRYGNQ8WXF5 182 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 MBOAT7Q96N66 472 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 NOX5Q96PH1 765 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 EDEM3Q9BZQ6 932 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 CXorf56Q9H5V9 222 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 KIF1CO43896 1103 aaKnown RBP9.8□□□□□ -0.84
GPNMB-202ENST00000381990 AKR1B10O60218 316 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 MARCH6O60337 910 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 PPP1R37O75864 691 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 FGFR1OPO95684 399 aaKnown RBP9.8□□□□□ -0.84
GPNMB-202ENST00000381990 CCDC172P0C7W6 258 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 RASSF7Q02833 373 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 GRB10Q13322 594 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 NAA35Q5VZE5 725 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 FAM160B2Q86V87 743 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 MICALL2Q8IY33 904 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 ARFGAP2Q8N6H7 521 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 HAS1Q92839 578 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 CDK5RAP3Q96JB5 506 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 TEPSINQ96N21 525 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 C7orf25Q9BPX7 421 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 LUC7LQ9NQ29 371 aaKnown RBP9.8□□□□□ -0.84
GPNMB-202ENST00000381990 ARHGAP20Q9P2F6 1191 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 SAMM50Q9Y512 469 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 ATAD5Q96QE3 1844 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 SSU72P8A0A1W2PR75 194 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 SPDYE3A6NKU9 549 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 PHF20L1A8MW92 1017 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 CHUKO15111 745 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 MOCS3O95396 460 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 EGFRP00533 1210 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 NR1D1P20393 614 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 SMTNP53814 917 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 ARHGAP4P98171 946 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 KRT79Q5XKE5 535 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 CNNM4Q6P4Q7 775 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 NFRKBQ6P4R8 1299 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 TRIM9Q9C026 710 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 NUCKS1Q9H1E3 243 aaKnown RBP9.8□□□□□ -0.84
GPNMB-202ENST00000381990 GINM1Q9NU53 330 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 PCDHA12Q9UN75 941 aa9.8□□□□□ -0.84
GPNMB-202ENST00000381990 POTEMA6NI47 508 aa9.79□□□□□ -0.84
GPNMB-202ENST00000381990 PIK3CDO00329 1044 aa9.79□□□□□ -0.84
GPNMB-202ENST00000381990 OPLAHO14841 1288 aa9.79□□□□□ -0.84
GPNMB-202ENST00000381990 FAM107AO95990 144 aa9.79□□□□□ -0.84
GPNMB-202ENST00000381990 KRT14P02533 472 aa9.79□□□□□ -0.84
GPNMB-202ENST00000381990 SREBF1P36956 1147 aa9.79□□□□□ -0.84
GPNMB-202ENST00000381990 SLC7A5Q01650 507 aa9.79□□□□□ -0.84
GPNMB-202ENST00000381990 ANKRD40Q6AI12 368 aa9.79□□□□□ -0.84
GPNMB-202ENST00000381990 GPATCH11Q8N954 259 aa9.79□□□□□ -0.84
GPNMB-202ENST00000381990 SNX29Q8TEQ0 813 aa9.79□□□□□ -0.84
GPNMB-202ENST00000381990 PNMA5Q96PV4 448 aa9.79□□□□□ -0.84
GPNMB-202ENST00000381990 RANBP17Q9H2T7 1088 aaKnown RBP9.79□□□□□ -0.84
GPNMB-202ENST00000381990 KCNMB3Q9NPA1 279 aa9.79□□□□□ -0.84
GPNMB-202ENST00000381990 CNOT7Q9UIV1 285 aaKnown RBP9.79□□□□□ -0.84
GPNMB-202ENST00000381990 GJA3Q9Y6H8 435 aa9.79□□□□□ -0.84
GPNMB-202ENST00000381990 ZNF233A6NK53 670 aa9.79□□□□□ -0.84
GPNMB-202ENST00000381990 SLC26A4O43511 780 aa9.79□□□□□ -0.84
GPNMB-202ENST00000381990 MATR3P43243 847 aaKnown RBP eCLIP9.79□□□□□ -0.84
GPNMB-202ENST00000381990 MAGEA1P43355 309 aa9.79□□□□□ -0.84
GPNMB-202ENST00000381990 KLK7P49862 253 aa9.79□□□□□ -0.84
GPNMB-202ENST00000381990 PRELPP51888 382 aa9.79□□□□□ -0.84
GPNMB-202ENST00000381990 PTGISQ16647 500 aa9.79□□□□□ -0.84
GPNMB-202ENST00000381990 VWA3BQ502W6 1294 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms