RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 IPO5O00410 1097 aaKnown RBP16.1■□□□□ 0.17
SHOX-202ENST00000381575 ENPP3O14638 875 aa16.1■□□□□ 0.17
SHOX-202ENST00000381575 DHX15O43143 795 aaKnown RBP16.1■□□□□ 0.17
SHOX-202ENST00000381575 ATG7O95352 703 aa16.1■□□□□ 0.17
SHOX-202ENST00000381575 CTNNB1P35222 781 aa16.1■□□□□ 0.17
SHOX-202ENST00000381575 GPM6BQ13491 265 aa16.1■□□□□ 0.17
SHOX-202ENST00000381575 TMEM266Q2M3C6 531 aa16.1■□□□□ 0.17
SHOX-202ENST00000381575 ABHD15Q6UXT9 468 aa16.1■□□□□ 0.17
SHOX-202ENST00000381575 PLPPR4Q7Z2D5 763 aa16.1■□□□□ 0.17
SHOX-202ENST00000381575 CRYGNQ8WXF5 182 aa16.1■□□□□ 0.17
SHOX-202ENST00000381575 IL17RAQ96F46 866 aa16.1■□□□□ 0.17
SHOX-202ENST00000381575 PPP1R16BQ96T49 567 aa16.1■□□□□ 0.17
SHOX-202ENST00000381575 ZMYND12Q9H0C1 365 aa16.1■□□□□ 0.17
SHOX-202ENST00000381575 GLT8D2Q9H1C3 349 aa16.1■□□□□ 0.17
SHOX-202ENST00000381575 UBE2ZQ9H832 354 aaPredicted RBP16.1■□□□□ 0.17
SHOX-202ENST00000381575 C6orf50Q9HD87 102 aa16.1■□□□□ 0.17
SHOX-202ENST00000381575 VPS54Q9P1Q0 977 aa16.1■□□□□ 0.17
SHOX-202ENST00000381575 RAPGEFL1Q9UHV5 662 aa16.1■□□□□ 0.17
SHOX-202ENST00000381575 GINS2Q9Y248 185 aa16.1■□□□□ 0.17
SHOX-202ENST00000381575 TRPV2Q9Y5S1 764 aa16.1■□□□□ 0.17
SHOX-202ENST00000381575 FNDC1Q4ZHG4 1894 aaPredicted RBP16.09■□□□□ 0.17
SHOX-202ENST00000381575 ESYT2A0FGR8 921 aa16.09■□□□□ 0.17
SHOX-202ENST00000381575 PRPF3O43395 683 aaKnown RBP16.09■□□□□ 0.17
SHOX-202ENST00000381575 KCNA5P22460 613 aa16.09■□□□□ 0.17
SHOX-202ENST00000381575 NTRK3Q16288 839 aa16.09■□□□□ 0.17
SHOX-202ENST00000381575 SWSAP1Q6NVH7 229 aa16.09■□□□□ 0.17
SHOX-202ENST00000381575 PDXDC2PQ6P474 469 aa16.09■□□□□ 0.17
SHOX-202ENST00000381575 MTHFD1LQ6UB35 978 aa16.09■□□□□ 0.17
SHOX-202ENST00000381575 NIPA1Q7RTP0 329 aa16.09■□□□□ 0.17
SHOX-202ENST00000381575 FIBCD1Q8N539 461 aa16.09■□□□□ 0.17
SHOX-202ENST00000381575 MRPL38Q96DV4 380 aaKnown RBP16.09■□□□□ 0.17
SHOX-202ENST00000381575 ZNF577Q9BSK1 485 aa16.09■□□□□ 0.17
SHOX-202ENST00000381575 AGXT2Q9BYV1 514 aa16.09■□□□□ 0.17
SHOX-202ENST00000381575 ZNF302Q9NR11 478 aa16.09■□□□□ 0.17
SHOX-202ENST00000381575 PCDHA2Q9Y5H9 948 aa16.09■□□□□ 0.17
SHOX-202ENST00000381575 ADGRA3Q8IWK6 1321 aa16.09■□□□□ 0.17
SHOX-202ENST00000381575 IGKV6D-21A0A0A0MT36 114 aa16.08■□□□□ 0.16
SHOX-202ENST00000381575 H3BNC9 293 aa16.08■□□□□ 0.16
SHOX-202ENST00000381575 M0QZ92 97 aa16.08■□□□□ 0.16
SHOX-202ENST00000381575 REC8O95072 547 aa16.08■□□□□ 0.16
SHOX-202ENST00000381575 CYP3A4P08684 503 aa16.08■□□□□ 0.16
SHOX-202ENST00000381575 ATP4AP20648 1035 aa16.08■□□□□ 0.16
SHOX-202ENST00000381575 KLRC1P26715 233 aa16.08■□□□□ 0.16
SHOX-202ENST00000381575 PDIA3P30101 505 aaKnown RBP16.08■□□□□ 0.16
SHOX-202ENST00000381575 GATMP50440 423 aa16.08■□□□□ 0.16
SHOX-202ENST00000381575 AKAP17AQ02040 695 aaKnown RBP16.08■□□□□ 0.16
SHOX-202ENST00000381575 TOB2Q14106 344 aaPredicted RBP16.08■□□□□ 0.16
SHOX-202ENST00000381575 PRR16Q569H4 304 aa16.08■□□□□ 0.16
SHOX-202ENST00000381575 IER5Q5VY09 327 aa16.08■□□□□ 0.16
SHOX-202ENST00000381575 FAM160B1Q5W0V3 765 aa16.08■□□□□ 0.16
SHOX-202ENST00000381575 RTN4RL1Q86UN2 441 aaPredicted RBP16.08■□□□□ 0.16
SHOX-202ENST00000381575 ATP8B4Q8TF62 1192 aa16.08■□□□□ 0.16
SHOX-202ENST00000381575 SAMD11Q96NU1 681 aa16.08■□□□□ 0.16
SHOX-202ENST00000381575 CDHR5Q9HBB8 845 aa16.08■□□□□ 0.16
SHOX-202ENST00000381575 RC3H2Q9HBD1 1191 aaKnown RBP16.08■□□□□ 0.16
SHOX-202ENST00000381575 PLXNA4Q9HCM2 1894 aa16.08■□□□□ 0.16
SHOX-202ENST00000381575 PADI3Q9ULW8 664 aa16.08■□□□□ 0.16
SHOX-202ENST00000381575 TRIOO75962 3097 aa16.07■□□□□ 0.16
SHOX-202ENST00000381575 IGSF9BQ9UPX0 1349 aa16.07■□□□□ 0.16
SHOX-202ENST00000381575 ZBTB42B2RXF5 422 aa16.07■□□□□ 0.16
SHOX-202ENST00000381575 LINC00271P0C7V0 271 aa16.07■□□□□ 0.16
SHOX-202ENST00000381575 PSMA5P28066 241 aa16.07■□□□□ 0.16
SHOX-202ENST00000381575 PAK2Q13177 524 aa16.07■□□□□ 0.16
SHOX-202ENST00000381575 BTG3Q14201 252 aaPredicted RBP16.07■□□□□ 0.16
SHOX-202ENST00000381575 PAN2Q504Q3 1202 aaKnown RBP16.07■□□□□ 0.16
SHOX-202ENST00000381575 TCEAL5Q5H9L2 206 aa16.07■□□□□ 0.16
SHOX-202ENST00000381575 MIS18BP1Q6P0N0 1132 aa16.07■□□□□ 0.16
SHOX-202ENST00000381575 EP400NLQ6ZTU2 488 aa16.07■□□□□ 0.16
SHOX-202ENST00000381575 TEX2Q8IWB9 1127 aa16.07■□□□□ 0.16
SHOX-202ENST00000381575 CKAP2LQ8IYA6 745 aa16.07■□□□□ 0.16
SHOX-202ENST00000381575 CCDC12Q8WUD4 166 aaPredicted RBP16.07■□□□□ 0.16
SHOX-202ENST00000381575 GJA10Q969M2 543 aa16.07■□□□□ 0.16
SHOX-202ENST00000381575 CELF4Q9BZC1 486 aaKnown RBP16.07■□□□□ 0.16
SHOX-202ENST00000381575 UPF3BQ9BZI7 483 aaKnown RBP16.07■□□□□ 0.16
SHOX-202ENST00000381575 SMIM35A0A1B0GVV1 85 aa16.06■□□□□ 0.16
SHOX-202ENST00000381575 H3BQ06 376 aaPredicted RBP16.06■□□□□ 0.16
SHOX-202ENST00000381575 GRM6O15303 877 aa16.06■□□□□ 0.16
SHOX-202ENST00000381575 EDIL3O43854 480 aa16.06■□□□□ 0.16
SHOX-202ENST00000381575 HBP1O60381 514 aa16.06■□□□□ 0.16
SHOX-202ENST00000381575 DTNBO60941 627 aa16.06■□□□□ 0.16
SHOX-202ENST00000381575 KRT76Q01546 638 aa16.06■□□□□ 0.16
SHOX-202ENST00000381575 STK3Q13188 491 aa16.06■□□□□ 0.16
SHOX-202ENST00000381575 PTPROQ16827 1216 aa16.06■□□□□ 0.16
SHOX-202ENST00000381575 BANK1Q8NDB2 785 aa16.06■□□□□ 0.16
SHOX-202ENST00000381575 LENG9Q96B70 501 aa16.06■□□□□ 0.16
SHOX-202ENST00000381575 RNF26Q9BY78 433 aaPredicted RBP16.06■□□□□ 0.16
SHOX-202ENST00000381575 TMX1Q9H3N1 280 aa16.06■□□□□ 0.16
SHOX-202ENST00000381575 TCEAL9Q9UHQ7 104 aa16.06■□□□□ 0.16
SHOX-202ENST00000381575 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.05■□□□□ 0.16
SHOX-202ENST00000381575 MGEA5O60502 916 aa16.05■□□□□ 0.16
SHOX-202ENST00000381575 IFNAR1P17181 557 aa16.05■□□□□ 0.16
SHOX-202ENST00000381575 GNA11P29992 359 aa16.05■□□□□ 0.16
SHOX-202ENST00000381575 SLC26A2P50443 739 aa16.05■□□□□ 0.16
SHOX-202ENST00000381575 SETQ01105 290 aaPredicted RBP16.05■□□□□ 0.16
SHOX-202ENST00000381575 NFX1Q12986 1120 aaKnown RBP16.05■□□□□ 0.16
SHOX-202ENST00000381575 TIGD5Q53EQ6 642 aa16.05■□□□□ 0.16
SHOX-202ENST00000381575 RUFY3Q7L099 469 aa16.05■□□□□ 0.16
SHOX-202ENST00000381575 KIAA0319LQ8IZA0 1049 aa16.05■□□□□ 0.16
SHOX-202ENST00000381575 FBXL16Q8N461 479 aa16.05■□□□□ 0.16
SHOX-202ENST00000381575 TMEM40Q8WWA1 233 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms