RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 NALCNQ8IZF0 1738 aa20.6■□□□□ 0.89
SMARCD1-201ENST00000381513 GSTT1P30711 240 aa20.6■□□□□ 0.89
SMARCD1-201ENST00000381513 C1QTNF12Q5T7M4 302 aa20.6■□□□□ 0.89
SMARCD1-201ENST00000381513 ZNF449Q6P9G9 518 aa20.6■□□□□ 0.89
SMARCD1-201ENST00000381513 ASRGL1Q7L266 308 aa20.6■□□□□ 0.89
SMARCD1-201ENST00000381513 ZNF330Q9Y3S2 320 aaPredicted RBP20.6■□□□□ 0.89
SMARCD1-201ENST00000381513 TNKSO95271 1327 aa20.6■□□□□ 0.89
SMARCD1-201ENST00000381513 NVLO15381 856 aaKnown RBP20.59■□□□□ 0.89
SMARCD1-201ENST00000381513 AGTP01019 485 aa20.59■□□□□ 0.89
SMARCD1-201ENST00000381513 TARSP26639 723 aaKnown RBP20.59■□□□□ 0.89
SMARCD1-201ENST00000381513 ADCY1Q08828 1119 aa20.59■□□□□ 0.89
SMARCD1-201ENST00000381513 SLC18A3Q16572 532 aa20.59■□□□□ 0.89
SMARCD1-201ENST00000381513 FAM83BQ5T0W9 1011 aa20.59■□□□□ 0.89
SMARCD1-201ENST00000381513 PLBD2Q8NHP8 589 aa20.59■□□□□ 0.89
SMARCD1-201ENST00000381513 ACTRT1Q8TDG2 376 aa20.59■□□□□ 0.89
SMARCD1-201ENST00000381513 RASGRF2O14827 1237 aa20.59■□□□□ 0.89
SMARCD1-201ENST00000381513 ATP6V1G1O75348 118 aa20.59■□□□□ 0.89
SMARCD1-201ENST00000381513 CCDC25Q86WR0 208 aa20.59■□□□□ 0.89
SMARCD1-201ENST00000381513 TTC8Q8TAM2 541 aa20.59■□□□□ 0.89
SMARCD1-201ENST00000381513 RASGRP4Q8TDF6 673 aa20.59■□□□□ 0.89
SMARCD1-201ENST00000381513 RNF25Q96BH1 459 aaPredicted RBP20.59■□□□□ 0.89
SMARCD1-201ENST00000381513 LSM14BQ9BX40 385 aaKnown RBP20.59■□□□□ 0.89
SMARCD1-201ENST00000381513 PREBQ9HCU5 417 aa20.59■□□□□ 0.89
SMARCD1-201ENST00000381513 RHBDL2Q9NX52 303 aa20.59■□□□□ 0.89
SMARCD1-201ENST00000381513 ENTPD5O75356 428 aa20.59■□□□□ 0.89
SMARCD1-201ENST00000381513 UNC5CO95185 931 aa20.59■□□□□ 0.89
SMARCD1-201ENST00000381513 SNRPA1P09661 255 aaKnown RBP20.59■□□□□ 0.89
SMARCD1-201ENST00000381513 CACNA2D1P54289 1103 aa20.59■□□□□ 0.89
SMARCD1-201ENST00000381513 MEX3CQ5U5Q3 659 aaKnown RBP20.59■□□□□ 0.89
SMARCD1-201ENST00000381513 UTP4Q969X6 686 aaKnown RBP20.59■□□□□ 0.89
SMARCD1-201ENST00000381513 SEMA6BQ9H3T3 888 aa20.59■□□□□ 0.89
SMARCD1-201ENST00000381513 SLITRK6Q9H5Y7 841 aa20.59■□□□□ 0.89
SMARCD1-201ENST00000381513 TXLNGQ9NUQ3 528 aa20.59■□□□□ 0.89
SMARCD1-201ENST00000381513 USH1CQ9Y6N9 552 aa20.59■□□□□ 0.89
SMARCD1-201ENST00000381513 CIAO1O76071 339 aa20.58■□□□□ 0.89
SMARCD1-201ENST00000381513 FGGP02679 453 aa20.58■□□□□ 0.89
SMARCD1-201ENST00000381513 ACADSP16219 412 aa20.58■□□□□ 0.89
SMARCD1-201ENST00000381513 SETDB1Q15047 1291 aa20.58■□□□□ 0.89
SMARCD1-201ENST00000381513 UBE3CQ15386 1083 aa20.58■□□□□ 0.89
SMARCD1-201ENST00000381513 DIXDC1Q155Q3 683 aa20.58■□□□□ 0.89
SMARCD1-201ENST00000381513 CATIPQ7Z7H3 387 aa20.58■□□□□ 0.89
SMARCD1-201ENST00000381513 MAGEB6Q8N7X4 407 aa20.58■□□□□ 0.89
SMARCD1-201ENST00000381513 NACAP1Q9BZK3 213 aa20.58■□□□□ 0.89
SMARCD1-201ENST00000381513 STMN4Q9H169 189 aaPredicted RBP20.58■□□□□ 0.89
SMARCD1-201ENST00000381513 KANSL2Q9H9L4 492 aa20.58■□□□□ 0.89
SMARCD1-201ENST00000381513 HAO1Q9UJM8 370 aa20.58■□□□□ 0.89
SMARCD1-201ENST00000381513 TLR2O60603 784 aa20.58■□□□□ 0.88
SMARCD1-201ENST00000381513 WFS1O76024 890 aa20.58■□□□□ 0.88
SMARCD1-201ENST00000381513 MYL1P05976 194 aa20.58■□□□□ 0.88
SMARCD1-201ENST00000381513 FGFR4P22455 802 aa20.58■□□□□ 0.88
SMARCD1-201ENST00000381513 KSR1Q8IVT5 923 aa20.58■□□□□ 0.88
SMARCD1-201ENST00000381513 RBM12BQ8IXT5 1001 aaKnown RBP20.58■□□□□ 0.88
SMARCD1-201ENST00000381513 GLG1Q92896 1179 aa20.58■□□□□ 0.88
SMARCD1-201ENST00000381513 SEMA4AQ9H3S1 761 aa20.58■□□□□ 0.88
SMARCD1-201ENST00000381513 ATP6V0A2Q9Y487 856 aa20.58■□□□□ 0.88
SMARCD1-201ENST00000381513 PFDN1O60925 122 aa20.57■□□□□ 0.88
SMARCD1-201ENST00000381513 PCCAP05165 728 aaPredicted RBP20.57■□□□□ 0.88
SMARCD1-201ENST00000381513 FAM163BP0C2L3 166 aa20.57■□□□□ 0.88
SMARCD1-201ENST00000381513 ABCD1P33897 745 aa20.57■□□□□ 0.88
SMARCD1-201ENST00000381513 HOMEZQ8IX15 550 aa20.57■□□□□ 0.88
SMARCD1-201ENST00000381513 CTTNBP2NLQ9P2B4 639 aa20.57■□□□□ 0.88
SMARCD1-201ENST00000381513 DAAM1Q9Y4D1 1078 aa20.57■□□□□ 0.88
SMARCD1-201ENST00000381513 MYH7P12883 1935 aa20.57■□□□□ 0.88
SMARCD1-201ENST00000381513 SMAPO00193 183 aa20.57■□□□□ 0.88
SMARCD1-201ENST00000381513 PRPF3O43395 683 aaKnown RBP20.57■□□□□ 0.88
SMARCD1-201ENST00000381513 OR52E8Q6IFG1 317 aa20.57■□□□□ 0.88
SMARCD1-201ENST00000381513 IRGCQ6NXR0 463 aa20.57■□□□□ 0.88
SMARCD1-201ENST00000381513 FAM13CQ8NE31 585 aa20.57■□□□□ 0.88
SMARCD1-201ENST00000381513 ATL2Q8NHH9 583 aa20.57■□□□□ 0.88
SMARCD1-201ENST00000381513 LRRC8CQ8TDW0 803 aa20.57■□□□□ 0.88
SMARCD1-201ENST00000381513 ERP27Q96DN0 273 aa20.57■□□□□ 0.88
SMARCD1-201ENST00000381513 VCX3BQ9H321 246 aa20.57■□□□□ 0.88
SMARCD1-201ENST00000381513 VCX3AQ9NNX9 186 aa20.57■□□□□ 0.88
SMARCD1-201ENST00000381513 TMEM120BA0PK00 339 aa20.57■□□□□ 0.88
SMARCD1-201ENST00000381513 SKIP12755 728 aa20.57■□□□□ 0.88
SMARCD1-201ENST00000381513 KRT13P13646 458 aa20.57■□□□□ 0.88
SMARCD1-201ENST00000381513 PLCG1P19174 1290 aa20.57■□□□□ 0.88
SMARCD1-201ENST00000381513 RBBP8NLQ8NC74 664 aaPredicted RBP20.57■□□□□ 0.88
SMARCD1-201ENST00000381513 FBXO25Q8TCJ0 367 aa20.57■□□□□ 0.88
SMARCD1-201ENST00000381513 ASAP3Q8TDY4 903 aa20.57■□□□□ 0.88
SMARCD1-201ENST00000381513 BLOC1S6Q9UL45 172 aa20.57■□□□□ 0.88
SMARCD1-201ENST00000381513 ATP9AO75110 1047 aa20.56■□□□□ 0.88
SMARCD1-201ENST00000381513 GM2AP17900 193 aa20.56■□□□□ 0.88
SMARCD1-201ENST00000381513 KCNMA1Q12791 1236 aa20.56■□□□□ 0.88
SMARCD1-201ENST00000381513 MYBPC3Q14896 1274 aa20.56■□□□□ 0.88
SMARCD1-201ENST00000381513 SDCCAG8Q86SQ7 713 aaPredicted RBP20.56■□□□□ 0.88
SMARCD1-201ENST00000381513 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.56■□□□□ 0.883e-8■■■■■ 116
SMARCD1-201ENST00000381513 TBC1D16Q8TBP0 767 aa20.56■□□□□ 0.88
SMARCD1-201ENST00000381513 TRAPPC9Q96Q05 1148 aa20.56■□□□□ 0.88
SMARCD1-201ENST00000381513 METTL5Q9NRN9 209 aaKnown RBP20.56■□□□□ 0.88
SMARCD1-201ENST00000381513 ZNF232Q9UNY5 417 aa20.56■□□□□ 0.88
SMARCD1-201ENST00000381513 IFIT1BQ5T764 474 aaKnown RBP20.56■□□□□ 0.88
SMARCD1-201ENST00000381513 FOXB2Q5VYV0 432 aa20.56■□□□□ 0.88
SMARCD1-201ENST00000381513 LMOD2Q6P5Q4 547 aa20.56■□□□□ 0.88
SMARCD1-201ENST00000381513 TRIM9Q9C026 710 aa20.56■□□□□ 0.88
SMARCD1-201ENST00000381513 KBTBD4Q9NVX7 518 aa20.56■□□□□ 0.88
SMARCD1-201ENST00000381513 NMRK1Q9NWW6 199 aa20.56■□□□□ 0.88
SMARCD1-201ENST00000381513 E7ENQ6 273 aa20.55■□□□□ 0.88
SMARCD1-201ENST00000381513 STX2P32856 288 aa20.55■□□□□ 0.88
SMARCD1-201ENST00000381513 DR1Q01658 176 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms