RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 RASGRF2O14827 1237 aa18.54■□□□□ 0.56
SGCB-201ENST00000381431 BAG6P46379 1132 aa18.54■□□□□ 0.56
SGCB-201ENST00000381431 SESN3P58005 492 aa18.54■□□□□ 0.56
SGCB-201ENST00000381431 AP3B2Q13367 1082 aa18.54■□□□□ 0.56
SGCB-201ENST00000381431 CCDC38Q502W7 563 aa18.54■□□□□ 0.56
SGCB-201ENST00000381431 ZNF34Q8IZ26 560 aa18.54■□□□□ 0.56
SGCB-201ENST00000381431 RNF10Q8N5U6 811 aaKnown RBP18.54■□□□□ 0.56
SGCB-201ENST00000381431 BANK1Q8NDB2 785 aa18.54■□□□□ 0.56
SGCB-201ENST00000381431 SALL3Q9BXA9 1300 aa18.54■□□□□ 0.56
SGCB-201ENST00000381431 LRRD1A4D1F6 860 aa18.54■□□□□ 0.56
SGCB-201ENST00000381431 EAPPQ56P03 285 aaPredicted RBP18.54■□□□□ 0.56
SGCB-201ENST00000381431 SPATA24Q86W54 205 aa18.54■□□□□ 0.56
SGCB-201ENST00000381431 ZNF394Q53GI3 561 aa18.54■□□□□ 0.56
SGCB-201ENST00000381431 TRIM68Q6AZZ1 485 aa18.54■□□□□ 0.56
SGCB-201ENST00000381431 PDXDC2PQ6P474 469 aa18.54■□□□□ 0.56
SGCB-201ENST00000381431 BBOF1Q8ND07 529 aa18.54■□□□□ 0.56
SGCB-201ENST00000381431 FAM149B1Q96BN6 582 aa18.54■□□□□ 0.56
SGCB-201ENST00000381431 CALN1Q9BXU9 219 aa18.54■□□□□ 0.56
SGCB-201ENST00000381431 PLAAQ9Y263 795 aa18.54■□□□□ 0.56
SGCB-201ENST00000381431 MORC2Q9Y6X9 1032 aaPredicted RBP18.54■□□□□ 0.56
SGCB-201ENST00000381431 NT5C2P49902 561 aa18.54■□□□□ 0.56
SGCB-201ENST00000381431 GPSM2P81274 684 aa18.54■□□□□ 0.56
SGCB-201ENST00000381431 PPP2R5AQ15172 486 aa18.54■□□□□ 0.56
SGCB-201ENST00000381431 ZBTB33Q86T24 672 aa18.54■□□□□ 0.56
SGCB-201ENST00000381431 NEXMIFQ5QGS0 1516 aa18.53■□□□□ 0.56
SGCB-201ENST00000381431 EIF3CLB5ME19 914 aaKnown RBP18.53■□□□□ 0.56
SGCB-201ENST00000381431 KNOP1Q1ED39 458 aaKnown RBP18.53■□□□□ 0.56
SGCB-201ENST00000381431 TRIM50Q86XT4 487 aa18.53■□□□□ 0.56
SGCB-201ENST00000381431 EIF3CQ99613 913 aaKnown RBP18.53■□□□□ 0.56
SGCB-201ENST00000381431 TRIM49P0CI25 452 aa18.53■□□□□ 0.56
SGCB-201ENST00000381431 TRIM49CP0CI26 452 aa18.53■□□□□ 0.56
SGCB-201ENST00000381431 SAT1P21673 171 aa18.53■□□□□ 0.56
SGCB-201ENST00000381431 CCDC125Q86Z20 511 aa18.53■□□□□ 0.56
SGCB-201ENST00000381431 MARCH10Q8NA82 808 aaPredicted RBP18.53■□□□□ 0.56
SGCB-201ENST00000381431 ARHGAP42A6NI28 874 aa18.53■□□□□ 0.56
SGCB-201ENST00000381431 ZNF185O15231 689 aa18.53■□□□□ 0.56
SGCB-201ENST00000381431 DPYDQ12882 1025 aa18.53■□□□□ 0.56
SGCB-201ENST00000381431 ADSSL1Q8N142 457 aa18.53■□□□□ 0.56
SGCB-201ENST00000381431 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.53■□□□□ 0.56
SGCB-201ENST00000381431 DYDC2Q96IM9 177 aa18.53■□□□□ 0.56
SGCB-201ENST00000381431 CCSER1Q9C0I3 900 aa18.53■□□□□ 0.56
SGCB-201ENST00000381431 SEPT10Q9P0V9 454 aa18.53■□□□□ 0.56
SGCB-201ENST00000381431 A0A087WUV0 522 aaPredicted RBP18.52■□□□□ 0.56
SGCB-201ENST00000381431 TMED2Q15363 201 aa18.52■□□□□ 0.56
SGCB-201ENST00000381431 TMEM60Q9H2L4 133 aa18.52■□□□□ 0.56
SGCB-201ENST00000381431 CAPN11Q9UMQ6 739 aa18.52■□□□□ 0.56
SGCB-201ENST00000381431 BAZ2BQ9UIF8 2168 aaKnown RBP18.52■□□□□ 0.56
SGCB-201ENST00000381431 K7ERI5 159 aa18.52■□□□□ 0.56
SGCB-201ENST00000381431 MYO1CO00159 1063 aa18.52■□□□□ 0.56
SGCB-201ENST00000381431 USP14P54578 494 aa18.52■□□□□ 0.56
SGCB-201ENST00000381431 NR1I3Q14994 352 aa18.52■□□□□ 0.56
SGCB-201ENST00000381431 PPP1R16BQ96T49 567 aa18.52■□□□□ 0.56
SGCB-201ENST00000381431 SH2D3AQ9BRG2 576 aa18.52■□□□□ 0.56
SGCB-201ENST00000381431 ZMYND12Q9H0C1 365 aa18.52■□□□□ 0.56
SGCB-201ENST00000381431 ODF2LQ9ULJ1 636 aa18.52■□□□□ 0.56
SGCB-201ENST00000381431 A0A1W2PQC6 194 aa18.52■□□□□ 0.56
SGCB-201ENST00000381431 CCDC188H7C350 402 aa18.52■□□□□ 0.56
SGCB-201ENST00000381431 AP5Z1O43299 807 aa18.52■□□□□ 0.56
SGCB-201ENST00000381431 HSPA6P17066 643 aa18.52■□□□□ 0.56
SGCB-201ENST00000381431 IFRD2Q12894 506 aaPredicted RBP18.52■□□□□ 0.56
SGCB-201ENST00000381431 FAM133BQ5BKY9 247 aaKnown RBP18.52■□□□□ 0.56
SGCB-201ENST00000381431 FAM47CQ5HY64 1035 aa18.52■□□□□ 0.56
SGCB-201ENST00000381431 DNAJC24Q6P3W2 148 aa18.52■□□□□ 0.56
SGCB-201ENST00000381431 PADI6Q6TGC4 694 aa18.52■□□□□ 0.56
SGCB-201ENST00000381431 NME8Q8N427 588 aa18.52■□□□□ 0.56
SGCB-201ENST00000381431 RFX6Q8HWS3 928 aa18.52■□□□□ 0.55
SGCB-201ENST00000381431 SULF1Q8IWU6 871 aa18.52■□□□□ 0.55
SGCB-201ENST00000381431 LIMA1Q9UHB6 759 aaKnown RBP18.52■□□□□ 0.55
SGCB-201ENST00000381431 CRCPO75575 148 aa18.51■□□□□ 0.55
SGCB-201ENST00000381431 KRT1P04264 644 aa18.51■□□□□ 0.55
SGCB-201ENST00000381431 INHBAP08476 426 aa18.51■□□□□ 0.55
SGCB-201ENST00000381431 SRGAP2CP0DJJ0 459 aa18.51■□□□□ 0.55
SGCB-201ENST00000381431 IL9RQ01113 521 aa18.51■□□□□ 0.55
SGCB-201ENST00000381431 SCARA5Q6ZMJ2 495 aa18.51■□□□□ 0.55
SGCB-201ENST00000381431 GLYCTKQ8IVS8 523 aa18.51■□□□□ 0.55
SGCB-201ENST00000381431 EFCAB13Q8IY85 973 aa18.51■□□□□ 0.55
SGCB-201ENST00000381431 C7orf31Q8N865 590 aa18.51■□□□□ 0.55
SGCB-201ENST00000381431 SPATA4Q8NEY3 305 aa18.51■□□□□ 0.55
SGCB-201ENST00000381431 HEMGNQ9BXL5 484 aa18.51■□□□□ 0.55
SGCB-201ENST00000381431 RGL1Q9NZL6 768 aa18.51■□□□□ 0.55
SGCB-201ENST00000381431 PNMA2Q9UL42 364 aa18.51■□□□□ 0.55
SGCB-201ENST00000381431 ASNSP08243 561 aa18.51■□□□□ 0.55
SGCB-201ENST00000381431 KCNB1Q14721 858 aa18.51■□□□□ 0.55
SGCB-201ENST00000381431 E2F4Q16254 413 aa18.51■□□□□ 0.55
SGCB-201ENST00000381431 KLHL29Q96CT2 875 aa18.51■□□□□ 0.55
SGCB-201ENST00000381431 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.51■□□□□ 0.55
SGCB-201ENST00000381431 ADAMTS13Q76LX8 1427 aa18.51■□□□□ 0.55
SGCB-201ENST00000381431 SLC12A2P55011 1212 aa18.51■□□□□ 0.55
SGCB-201ENST00000381431 BASP1P80723 227 aaKnown RBP18.51■□□□□ 0.55
SGCB-201ENST00000381431 SARNPP82979 210 aaKnown RBP18.51■□□□□ 0.55
SGCB-201ENST00000381431 HIBCHQ6NVY1 386 aaPredicted RBP18.51■□□□□ 0.55
SGCB-201ENST00000381431 FAM160B2Q86V87 743 aa18.51■□□□□ 0.55
SGCB-201ENST00000381431 GDAP1Q8TB36 358 aa18.51■□□□□ 0.55
SGCB-201ENST00000381431 HAUS1Q96CS2 278 aa18.51■□□□□ 0.55
SGCB-201ENST00000381431 FAM20AQ96MK3 541 aa18.51■□□□□ 0.55
SGCB-201ENST00000381431 MXD3Q9BW11 206 aa18.51■□□□□ 0.55
SGCB-201ENST00000381431 C1orf167Q5SNV9 1468 aa18.51■□□□□ 0.55
SGCB-201ENST00000381431 RPSAP08865 295 aaKnown RBP18.5■□□□□ 0.55
SGCB-201ENST00000381431 KCTD2Q14681 263 aa18.5■□□□□ 0.55
SGCB-201ENST00000381431 DRAP1Q14919 205 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms