RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 C19orf81C9J6K1 198 aa13.32□□□□□ -0.28
GABPB1-203ENST00000380877 OSTNP61366 133 aa13.32□□□□□ -0.28
GABPB1-203ENST00000380877 PPP2R5EQ16537 467 aa13.32□□□□□ -0.28
GABPB1-203ENST00000380877 FAM81BQ96LP2 452 aa13.32□□□□□ -0.28
GABPB1-203ENST00000380877 TXNDC16Q9P2K2 825 aa13.32□□□□□ -0.28
GABPB1-203ENST00000380877 FMR1Q06787 632 aaKnown RBP eCLIP13.32□□□□□ -0.28
GABPB1-203ENST00000380877 ADAT2Q7Z6V5 191 aaKnown RBP13.32□□□□□ -0.28
GABPB1-203ENST00000380877 DAGLBQ8NCG7 672 aa13.32□□□□□ -0.28
GABPB1-203ENST00000380877 ACER1Q8TDN7 264 aa13.32□□□□□ -0.28
GABPB1-203ENST00000380877 MSTO1Q9BUK6 570 aa13.32□□□□□ -0.28
GABPB1-203ENST00000380877 PCDHA10Q9Y5I2 948 aa13.32□□□□□ -0.28
GABPB1-203ENST00000380877 COMMD10Q9Y6G5 202 aa13.32□□□□□ -0.28
GABPB1-203ENST00000380877 MRC1P22897 1456 aa13.31□□□□□ -0.28
GABPB1-203ENST00000380877 SLFN12LQ6IEE8 588 aa13.31□□□□□ -0.28
GABPB1-203ENST00000380877 NLRP7Q8WX94 980 aa13.31□□□□□ -0.28
GABPB1-203ENST00000380877 ZNF653Q96CK0 615 aa13.31□□□□□ -0.28
GABPB1-203ENST00000380877 NSRP1Q9H0G5 558 aaKnown RBP13.31□□□□□ -0.28
GABPB1-203ENST00000380877 EHD4Q9H223 541 aa13.31□□□□□ -0.28
GABPB1-203ENST00000380877 E7EVH7 732 aa13.31□□□□□ -0.28
GABPB1-203ENST00000380877 Q3C1V9 767 aa13.31□□□□□ -0.28
GABPB1-203ENST00000380877 ALKBH5Q6P6C2 394 aaKnown RBP13.31□□□□□ -0.28
GABPB1-203ENST00000380877 CEP128Q6ZU80 1094 aa13.31□□□□□ -0.28
GABPB1-203ENST00000380877 RABGGTAQ92696 567 aa13.31□□□□□ -0.28
GABPB1-203ENST00000380877 PPP1R16BQ96T49 567 aa13.31□□□□□ -0.28
GABPB1-203ENST00000380877 ELP3Q9H9T3 547 aa13.31□□□□□ -0.28
GABPB1-203ENST00000380877 KCNK9Q9NPC2 374 aa13.31□□□□□ -0.28
GABPB1-203ENST00000380877 HPDP32754 393 aaPredicted RBP13.31□□□□□ -0.28
GABPB1-203ENST00000380877 ADSSL1Q8N142 457 aa13.31□□□□□ -0.28
GABPB1-203ENST00000380877 DPF2Q92785 391 aa13.31□□□□□ -0.28
GABPB1-203ENST00000380877 MTFR1LQ9H019 292 aa13.31□□□□□ -0.28
GABPB1-203ENST00000380877 TUFT1Q9NNX1 390 aa13.31□□□□□ -0.28
GABPB1-203ENST00000380877 FBXO28Q9NVF7 368 aa13.31□□□□□ -0.28
GABPB1-203ENST00000380877 DENND3A2RUS2 1198 aa13.3□□□□□ -0.28
GABPB1-203ENST00000380877 CTNND1O60716 968 aaKnown RBP13.3□□□□□ -0.28
GABPB1-203ENST00000380877 CXCL9Q07325 125 aa13.3□□□□□ -0.28
GABPB1-203ENST00000380877 ANKRD40Q6AI12 368 aa13.3□□□□□ -0.28
GABPB1-203ENST00000380877 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.3□□□□□ -0.28
GABPB1-203ENST00000380877 FAM163AQ96GL9 167 aaPredicted RBP13.3□□□□□ -0.28
GABPB1-203ENST00000380877 C7orf25Q9BPX7 421 aa13.3□□□□□ -0.28
GABPB1-203ENST00000380877 MIS12Q9H081 205 aa13.3□□□□□ -0.28
GABPB1-203ENST00000380877 NXF1Q9UBU9 619 aaKnown RBP13.3□□□□□ -0.28
GABPB1-203ENST00000380877 PCDHA13Q9Y5I0 950 aa13.3□□□□□ -0.28
GABPB1-203ENST00000380877 TTC26A0AVF1 554 aa13.3□□□□□ -0.28
GABPB1-203ENST00000380877 RHOBTB3O94955 611 aa13.3□□□□□ -0.28
GABPB1-203ENST00000380877 NAA35Q5VZE5 725 aa13.3□□□□□ -0.28
GABPB1-203ENST00000380877 ZNF302Q9NR11 478 aa13.3□□□□□ -0.28
GABPB1-203ENST00000380877 RSPH14Q9UHP6 348 aa13.3□□□□□ -0.28
GABPB1-203ENST00000380877 ABT1Q9ULW3 272 aaKnown RBP13.3□□□□□ -0.28
GABPB1-203ENST00000380877 XRN1Q8IZH2 1706 aaKnown RBP13.3□□□□□ -0.28
GABPB1-203ENST00000380877 TLR3O15455 904 aaKnown RBP13.3□□□□□ -0.28
GABPB1-203ENST00000380877 XPOTO43592 962 aaKnown RBP13.3□□□□□ -0.28
GABPB1-203ENST00000380877 IFNB1P01574 187 aa13.3□□□□□ -0.28
GABPB1-203ENST00000380877 STK4Q13043 487 aa13.3□□□□□ -0.28
GABPB1-203ENST00000380877 OTUD6BQ8N6M0 293 aa13.3□□□□□ -0.28
GABPB1-203ENST00000380877 TCP11Q8WWU5 503 aa13.3□□□□□ -0.28
GABPB1-203ENST00000380877 RAB20Q9NX57 234 aa13.3□□□□□ -0.28
GABPB1-203ENST00000380877 HACL1Q9UJ83 578 aa13.3□□□□□ -0.28
GABPB1-203ENST00000380877 THAP12O43422 761 aa13.3□□□□□ -0.28
GABPB1-203ENST00000380877 STAM2O75886 525 aa13.3□□□□□ -0.28
GABPB1-203ENST00000380877 IVLP07476 585 aa13.3□□□□□ -0.28
GABPB1-203ENST00000380877 CAP2P40123 477 aa13.3□□□□□ -0.28
GABPB1-203ENST00000380877 ECE1P42892 770 aa13.3□□□□□ -0.28
GABPB1-203ENST00000380877 TOB1P50616 345 aaPredicted RBP13.3□□□□□ -0.28
GABPB1-203ENST00000380877 HADHQ16836 314 aaKnown RBP13.3□□□□□ -0.28
GABPB1-203ENST00000380877 FASTKD5Q7L8L6 764 aaKnown RBP13.3□□□□□ -0.28
GABPB1-203ENST00000380877 CEP72Q9P209 647 aa13.3□□□□□ -0.28
GABPB1-203ENST00000380877 MYMKA6NI61 221 aa13.29□□□□□ -0.28
GABPB1-203ENST00000380877 MOCS3O95396 460 aa13.29□□□□□ -0.28
GABPB1-203ENST00000380877 GCLMP48507 274 aa13.29□□□□□ -0.28
GABPB1-203ENST00000380877 TGFB2P61812 414 aa13.29□□□□□ -0.28
GABPB1-203ENST00000380877 TOGARAM2Q6ZUX3 1019 aa13.29□□□□□ -0.28
GABPB1-203ENST00000380877 RSPH3Q86UC2 560 aa13.29□□□□□ -0.28
GABPB1-203ENST00000380877 JRKLQ9Y4A0 524 aa13.29□□□□□ -0.28
GABPB1-203ENST00000380877 RUFY4Q6ZNE9 571 aa13.29□□□□□ -0.28
GABPB1-203ENST00000380877 THNSL1Q8IYQ7 743 aa13.29□□□□□ -0.28
GABPB1-203ENST00000380877 RPS6KC1Q96S38 1066 aa13.29□□□□□ -0.28
GABPB1-203ENST00000380877 FAM49AQ9H0Q0 323 aaPredicted RBP13.29□□□□□ -0.28
GABPB1-203ENST00000380877 IL17RBQ9NRM6 502 aa13.29□□□□□ -0.28
GABPB1-203ENST00000380877 DNAJC12Q9UKB3 198 aa13.29□□□□□ -0.28
GABPB1-203ENST00000380877 GOLGA6CA6NDK9 693 aa13.29□□□□□ -0.28
GABPB1-203ENST00000380877 FTCDO95954 541 aa13.29□□□□□ -0.28
GABPB1-203ENST00000380877 NR3C2P08235 984 aa13.29□□□□□ -0.28
GABPB1-203ENST00000380877 GOLGA6DP0CG33 693 aa13.29□□□□□ -0.28
GABPB1-203ENST00000380877 GUCY2FP51841 1108 aa13.29□□□□□ -0.28
GABPB1-203ENST00000380877 C10orf76Q5T2E6 689 aa13.29□□□□□ -0.28
GABPB1-203ENST00000380877 SCYL2Q6P3W7 929 aa13.29□□□□□ -0.28
GABPB1-203ENST00000380877 AFAP1L1Q8TED9 768 aa13.29□□□□□ -0.28
GABPB1-203ENST00000380877 PSPC1Q8WXF1 523 aaKnown RBP13.29□□□□□ -0.28
GABPB1-203ENST00000380877 AGBL1Q96MI9 1066 aa13.29□□□□□ -0.28
GABPB1-203ENST00000380877 GOLGA6AQ9NYA3 693 aa13.29□□□□□ -0.28
GABPB1-203ENST00000380877 FAM169AQ9Y6X4 670 aa13.29□□□□□ -0.28
GABPB1-203ENST00000380877 LRRC53A6NM62 1247 aa13.29□□□□□ -0.28
GABPB1-203ENST00000380877 ATP2C2O75185 946 aa13.29□□□□□ -0.28
GABPB1-203ENST00000380877 RNF8O76064 485 aa13.29□□□□□ -0.28
GABPB1-203ENST00000380877 LDHAP00338 332 aaKnown RBP13.29□□□□□ -0.28
GABPB1-203ENST00000380877 PKN1Q16512 942 aa13.29□□□□□ -0.28
GABPB1-203ENST00000380877 MAPK6Q16659 721 aa13.29□□□□□ -0.28
GABPB1-203ENST00000380877 CPLX4Q7Z7G2 160 aa13.29□□□□□ -0.28
GABPB1-203ENST00000380877 SLC9A2Q9UBY0 812 aa13.29□□□□□ -0.28
GABPB1-203ENST00000380877 CLDN3O15551 220 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms