RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 MAN2A1Q16706 1144 aa15.72■□□□□ 0.11
CLCN4-201ENST00000380829 ERGIC2Q96RQ1 377 aa15.72■□□□□ 0.11
CLCN4-201ENST00000380829 MXRA8Q9BRK3 442 aa15.72■□□□□ 0.11
CLCN4-201ENST00000380829 GGA3Q9NZ52 723 aa15.72■□□□□ 0.11
CLCN4-201ENST00000380829 CTDP1Q9Y5B0 961 aaPredicted RBP15.72■□□□□ 0.11
CLCN4-201ENST00000380829 MAP2K7O14733 419 aa15.72■□□□□ 0.11
CLCN4-201ENST00000380829 PTPRAP18433 802 aa15.72■□□□□ 0.11
CLCN4-201ENST00000380829 SETQ01105 290 aaPredicted RBP15.72■□□□□ 0.11
CLCN4-201ENST00000380829 SKIDA1Q1XH10 827 aa15.72■□□□□ 0.11
CLCN4-201ENST00000380829 WDR59Q6PJI9 974 aa15.72■□□□□ 0.11
CLCN4-201ENST00000380829 WDR11Q9BZH6 1224 aa15.72■□□□□ 0.11
CLCN4-201ENST00000380829 KCTD10Q9H3F6 313 aa15.72■□□□□ 0.11
CLCN4-201ENST00000380829 GINM1Q9NU53 330 aa15.72■□□□□ 0.11
CLCN4-201ENST00000380829 WRAP73Q9P2S5 460 aaPredicted RBP15.72■□□□□ 0.11
CLCN4-201ENST00000380829 USP14P54578 494 aa15.71■□□□□ 0.11
CLCN4-201ENST00000380829 BACE1P56817 501 aa15.71■□□□□ 0.11
CLCN4-201ENST00000380829 CCDC40Q4G0X9 1142 aa15.71■□□□□ 0.11
CLCN4-201ENST00000380829 ARHGAP27Q6ZUM4 889 aa15.71■□□□□ 0.11
CLCN4-201ENST00000380829 CCDC155Q8N6L0 562 aa15.71■□□□□ 0.11
CLCN4-201ENST00000380829 GOLGA1Q92805 767 aa15.71■□□□□ 0.11
CLCN4-201ENST00000380829 ATG4CQ96DT6 458 aa15.71■□□□□ 0.11
CLCN4-201ENST00000380829 DEF6Q9H4E7 631 aa15.71■□□□□ 0.11
CLCN4-201ENST00000380829 TUFT1Q9NNX1 390 aa15.71■□□□□ 0.11
CLCN4-201ENST00000380829 PICK1Q9NRD5 415 aa15.71■□□□□ 0.11
CLCN4-201ENST00000380829 GPRC5DQ9NZD1 345 aa15.71■□□□□ 0.11
CLCN4-201ENST00000380829 COL4A3BPQ9Y5P4 624 aa15.71■□□□□ 0.11
CLCN4-201ENST00000380829 SFI1A8K8P3 1242 aa15.7■□□□□ 0.1
CLCN4-201ENST00000380829 ABL1P00519 1130 aa15.7■□□□□ 0.1
CLCN4-201ENST00000380829 MYBP10242 640 aa15.7■□□□□ 0.1
CLCN4-201ENST00000380829 EPS15P42566 896 aa15.7■□□□□ 0.1
CLCN4-201ENST00000380829 RINT1Q6NUQ1 792 aa15.7■□□□□ 0.1
CLCN4-201ENST00000380829 MCF2L2Q86YR7 1114 aa15.7■□□□□ 0.1
CLCN4-201ENST00000380829 APOBEC3FQ8IUX4 373 aaKnown RBP15.7■□□□□ 0.1
CLCN4-201ENST00000380829 ZNF280CQ8ND82 737 aa15.7■□□□□ 0.1
CLCN4-201ENST00000380829 SYTL5Q8TDW5 730 aaPredicted RBP15.7■□□□□ 0.1
CLCN4-201ENST00000380829 RABGGTAQ92696 567 aa15.7■□□□□ 0.1
CLCN4-201ENST00000380829 NUP58Q9BVL2 599 aa15.7■□□□□ 0.1
CLCN4-201ENST00000380829 TEKT3Q9BXF9 490 aa15.7■□□□□ 0.1
CLCN4-201ENST00000380829 KCNH7Q9NS40 1196 aa15.7■□□□□ 0.1
CLCN4-201ENST00000380829 FAM207AQ9NSI2 230 aaPredicted RBP15.7■□□□□ 0.1
CLCN4-201ENST00000380829 ZHX2Q9Y6X8 837 aa15.7■□□□□ 0.1
CLCN4-201ENST00000380829 RPTORQ8N122 1335 aa15.7■□□□□ 0.1
CLCN4-201ENST00000380829 DOCK1Q14185 1865 aa15.7■□□□□ 0.1
CLCN4-201ENST00000380829 EPHB6O15197 1021 aa15.7■□□□□ 0.1
CLCN4-201ENST00000380829 TBCAO75347 108 aaKnown RBP15.7■□□□□ 0.1
CLCN4-201ENST00000380829 EIF2AK2P19525 551 aaKnown RBP15.7■□□□□ 0.1
CLCN4-201ENST00000380829 HMGCS2P54868 508 aa15.7■□□□□ 0.1
CLCN4-201ENST00000380829 RPS6P62753 249 aaKnown RBP15.7■□□□□ 0.1
CLCN4-201ENST00000380829 PRKG1Q13976 671 aa15.7■□□□□ 0.1
CLCN4-201ENST00000380829 TSR1Q2NL82 804 aaKnown RBP15.7■□□□□ 0.1
CLCN4-201ENST00000380829 BANK1Q8NDB2 785 aa15.7■□□□□ 0.1
CLCN4-201ENST00000380829 PPM1EQ8WY54 764 aa15.7■□□□□ 0.1
CLCN4-201ENST00000380829 PURBQ96QR8 312 aaKnown RBP15.7■□□□□ 0.1
CLCN4-201ENST00000380829 TAAR1Q96RJ0 339 aa15.7■□□□□ 0.1
CLCN4-201ENST00000380829 ZNF112Q9UJU3 913 aa15.7■□□□□ 0.1
CLCN4-201ENST00000380829 RBBP6Q7Z6E9 1792 aaKnown RBP15.7■□□□□ 0.1
CLCN4-201ENST00000380829 CCDC151A5D8V7 595 aa15.69■□□□□ 0.1
CLCN4-201ENST00000380829 VWA5AO00534 786 aa15.69■□□□□ 0.1
CLCN4-201ENST00000380829 PRPF6O94906 941 aaKnown RBP15.69■□□□□ 0.1
CLCN4-201ENST00000380829 HIRAP54198 1017 aaPredicted RBP15.69■□□□□ 0.1
CLCN4-201ENST00000380829 CORO7P57737 925 aa15.69■□□□□ 0.1
CLCN4-201ENST00000380829 FOXR2Q6PJQ5 311 aa15.69■□□□□ 0.1
CLCN4-201ENST00000380829 LRRC31Q6UY01 552 aa15.69■□□□□ 0.1
CLCN4-201ENST00000380829 RETREG2Q8NC44 543 aa15.69■□□□□ 0.1
CLCN4-201ENST00000380829 SIK3Q9Y2K2 1263 aa15.69■□□□□ 0.1
CLCN4-201ENST00000380829 ZBED4O75132 1171 aa15.69■□□□□ 0.1
CLCN4-201ENST00000380829 MRPS9P82933 396 aaKnown RBP15.69■□□□□ 0.1
CLCN4-201ENST00000380829 NSMFQ6X4W1 530 aa15.69■□□□□ 0.1
CLCN4-201ENST00000380829 SMCR8Q8TEV9 937 aaPredicted RBP15.69■□□□□ 0.1
CLCN4-201ENST00000380829 PNKPQ96T60 521 aa15.69■□□□□ 0.1
CLCN4-201ENST00000380829 MMRN2Q9H8L6 949 aa15.69■□□□□ 0.1
CLCN4-201ENST00000380829 PUF60Q9UHX1 559 aaKnown RBP15.69■□□□□ 0.1
CLCN4-201ENST00000380829 RIPK3Q9Y572 518 aa15.69■□□□□ 0.1
CLCN4-201ENST00000380829 EPN1Q9Y6I3 576 aaPredicted RBP15.69■□□□□ 0.1
CLCN4-201ENST00000380829 NDUFA10O95299 355 aa15.68■□□□□ 0.1
CLCN4-201ENST00000380829 HOXD13P35453 343 aa15.68■□□□□ 0.1
CLCN4-201ENST00000380829 ZBED6P86452 979 aa15.68■□□□□ 0.1
CLCN4-201ENST00000380829 ADAM9Q13443 819 aa15.68■□□□□ 0.1
CLCN4-201ENST00000380829 DLK2Q6UY11 383 aa15.68■□□□□ 0.1
CLCN4-201ENST00000380829 KRT26Q7Z3Y9 468 aa15.68■□□□□ 0.1
CLCN4-201ENST00000380829 GPIHBP1Q8IV16 184 aa15.68■□□□□ 0.1
CLCN4-201ENST00000380829 LXNQ9BS40 222 aa15.68■□□□□ 0.1
CLCN4-201ENST00000380829 AS3MTQ9HBK9 375 aa15.68■□□□□ 0.1
CLCN4-201ENST00000380829 GCNT3O95395 438 aa15.68■□□□□ 0.1
CLCN4-201ENST00000380829 KCNA1Q09470 495 aa15.68■□□□□ 0.1
CLCN4-201ENST00000380829 EPHA7Q15375 998 aa15.68■□□□□ 0.1
CLCN4-201ENST00000380829 MEA1Q16626 185 aa15.68■□□□□ 0.1
CLCN4-201ENST00000380829 TKFCQ3LXA3 575 aa15.68■□□□□ 0.1
CLCN4-201ENST00000380829 BEND6Q5SZJ8 279 aaPredicted RBP15.68■□□□□ 0.1
CLCN4-201ENST00000380829 B3GNT9Q6UX72 402 aa15.68■□□□□ 0.1
CLCN4-201ENST00000380829 C1orf186Q6ZWK4 172 aa15.68■□□□□ 0.1
CLCN4-201ENST00000380829 EPM2AIP1Q7L775 607 aaPredicted RBP15.68■□□□□ 0.1
CLCN4-201ENST00000380829 CEP63Q96MT8 703 aa15.68■□□□□ 0.1
CLCN4-201ENST00000380829 ANKZF1Q9H8Y5 726 aa15.68■□□□□ 0.1
CLCN4-201ENST00000380829 REXO2Q9Y3B8 237 aaKnown RBP15.68■□□□□ 0.1
CLCN4-201ENST00000380829 MYCLP12524 364 aaPredicted RBP15.67■□□□□ 0.1
CLCN4-201ENST00000380829 NR2F2P24468 414 aa15.67■□□□□ 0.1
CLCN4-201ENST00000380829 ITGB3BPQ13352 177 aaPredicted RBP15.67■□□□□ 0.1
CLCN4-201ENST00000380829 KNOP1Q1ED39 458 aaKnown RBP15.67■□□□□ 0.1
CLCN4-201ENST00000380829 PCNX4Q63HM2 1172 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms