RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 GRID2IPA4D2P6 1211 aa13.77□□□□□ -0.2
DNMT3A-204ENST00000380756 CASP7P55210 303 aa13.77□□□□□ -0.2
DNMT3A-204ENST00000380756 BFSP1Q12934 665 aa13.77□□□□□ -0.2
DNMT3A-204ENST00000380756 CCDC14Q49A88 953 aa13.77□□□□□ -0.2
DNMT3A-204ENST00000380756 SBK1Q52WX2 424 aa13.77□□□□□ -0.2
DNMT3A-204ENST00000380756 NAALADL2Q58DX5 795 aa13.77□□□□□ -0.2
DNMT3A-204ENST00000380756 BEND6Q5SZJ8 279 aaPredicted RBP13.77□□□□□ -0.2
DNMT3A-204ENST00000380756 ARHGEF16Q5VV41 709 aa13.77□□□□□ -0.2
DNMT3A-204ENST00000380756 TBC1D9BQ66K14 1250 aa13.77□□□□□ -0.2
DNMT3A-204ENST00000380756 PNKPQ96T60 521 aa13.77□□□□□ -0.2
DNMT3A-204ENST00000380756 OVOS2A0A0G2JMS6 1433 aa13.77□□□□□ -0.2
DNMT3A-204ENST00000380756 SSU72P8A0A1W2PR75 194 aa13.77□□□□□ -0.21
DNMT3A-204ENST00000380756 POTEFA5A3E0 1075 aa13.77□□□□□ -0.21
DNMT3A-204ENST00000380756 USP17L10C9JJH3 530 aa13.77□□□□□ -0.21
DNMT3A-204ENST00000380756 ZBTB22O15209 634 aa13.77□□□□□ -0.21
DNMT3A-204ENST00000380756 POTEIP0CG38 1075 aa13.77□□□□□ -0.21
DNMT3A-204ENST00000380756 PHBP35232 272 aa13.77□□□□□ -0.21
DNMT3A-204ENST00000380756 ARHGAP4P98171 946 aa13.77□□□□□ -0.21
DNMT3A-204ENST00000380756 ITIH3Q06033 890 aa13.77□□□□□ -0.21
DNMT3A-204ENST00000380756 POTEGQ6S5H5 508 aa13.77□□□□□ -0.21
DNMT3A-204ENST00000380756 POTEEQ6S8J3 1075 aa13.77□□□□□ -0.21
DNMT3A-204ENST00000380756 DBNDD1Q9H9R9 158 aa13.77□□□□□ -0.21
DNMT3A-204ENST00000380756 SALL1Q9NSC2 1324 aa13.77□□□□□ -0.21
DNMT3A-204ENST00000380756 H0YCG3 227 aa13.77□□□□□ -0.21
DNMT3A-204ENST00000380756 ERVK-24P63145 666 aa13.77□□□□□ -0.21
DNMT3A-204ENST00000380756 CDAN1Q8IWY9 1227 aa13.77□□□□□ -0.21
DNMT3A-204ENST00000380756 LRRC8CQ8TDW0 803 aa13.77□□□□□ -0.21
DNMT3A-204ENST00000380756 ODF2LQ9ULJ1 636 aa13.77□□□□□ -0.21
DNMT3A-204ENST00000380756 ZNF18P17022 549 aa13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 PDIA5Q14554 519 aa13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 C6orf118Q5T5N4 469 aa13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 ANKRD35Q8N283 1001 aa13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 NLGN1Q8N2Q7 840 aa13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 GJD4Q96KN9 370 aaPredicted RBP13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 ATP6V1G3Q96LB4 118 aa13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 TFR2Q9UP52 801 aa13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 NOP56O00567 594 aaKnown RBP13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 STAT2P52630 851 aa13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 MAGOHP61326 146 aaKnown RBP13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 COL9A3Q14050 684 aaPredicted RBP13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 GNPTABQ3T906 1256 aa13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 TRIM65Q6PJ69 517 aa13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 AZI2Q9H6S1 392 aa13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 HPCAL4Q9UM19 191 aa13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 PDS5AQ29RF7 1337 aaKnown RBP13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 MIF4GDA9UHW6 222 aaKnown RBP13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 LMNB2Q03252 620 aa13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 FAM133BQ5BKY9 247 aaKnown RBP13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 CC2D2BQ6DHV5 1058 aa13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 PPP1R18Q6NYC8 613 aa13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.76□□□□□ -0.212e-7■■□□□ 12.2
DNMT3A-204ENST00000380756 TMOD4Q9NZQ9 345 aa13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 ANAPC5Q9UJX4 755 aa13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 L1RE1Q9UN81 338 aa13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 BAZ2BQ9UIF8 2168 aaKnown RBP13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 RPSAP08865 295 aaKnown RBP13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 SNAP25P60880 206 aa13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 ADCY2Q08462 1091 aa13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 LRRN4CLQ8ND94 238 aa13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 CCDC110Q8TBZ0 833 aa13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 ANAPC4Q9UJX5 808 aa13.76□□□□□ -0.21
DNMT3A-204ENST00000380756 GMNCA6NCL1 334 aa13.75□□□□□ -0.21
DNMT3A-204ENST00000380756 PODXLO00592 558 aa13.75□□□□□ -0.21
DNMT3A-204ENST00000380756 MYCNP04198 464 aaPredicted RBP13.75□□□□□ -0.21
DNMT3A-204ENST00000380756 SF3B3Q15393 1217 aaKnown RBP13.75□□□□□ -0.21
DNMT3A-204ENST00000380756 HADHQ16836 314 aaKnown RBP13.75□□□□□ -0.21
DNMT3A-204ENST00000380756 DPY19L2Q6NUT2 758 aa13.75□□□□□ -0.21
DNMT3A-204ENST00000380756 ARHGEF18Q6ZSZ5 1173 aa13.75□□□□□ -0.21
DNMT3A-204ENST00000380756 SH2D3CQ8N5H7 860 aa13.75□□□□□ -0.21
DNMT3A-204ENST00000380756 FAM20AQ96MK3 541 aa13.75□□□□□ -0.21
DNMT3A-204ENST00000380756 PSMD1Q99460 953 aa13.75□□□□□ -0.21
DNMT3A-204ENST00000380756 COA1Q9GZY4 146 aa13.75□□□□□ -0.21
DNMT3A-204ENST00000380756 TBK1Q9UHD2 729 aa13.75□□□□□ -0.21
DNMT3A-204ENST00000380756 BCS1LQ9Y276 419 aa13.75□□□□□ -0.21
DNMT3A-204ENST00000380756 COMMD10Q9Y6G5 202 aa13.75□□□□□ -0.21
DNMT3A-204ENST00000380756 SLC18A3Q16572 532 aa13.75□□□□□ -0.21
DNMT3A-204ENST00000380756 MUM1L1Q5H9M0 696 aa13.75□□□□□ -0.21
DNMT3A-204ENST00000380756 TRIM11Q96F44 468 aa13.75□□□□□ -0.21
DNMT3A-204ENST00000380756 MS4A14Q96JA4 679 aa13.75□□□□□ -0.21
DNMT3A-204ENST00000380756 MYMKA6NI61 221 aa13.75□□□□□ -0.21
DNMT3A-204ENST00000380756 LRRIQ4A6NIV6 560 aa13.75□□□□□ -0.21
DNMT3A-204ENST00000380756 ACSL3O95573 720 aa13.75□□□□□ -0.21
DNMT3A-204ENST00000380756 MMEP08473 750 aa13.75□□□□□ -0.21
DNMT3A-204ENST00000380756 TAB3Q8N5C8 712 aaPredicted RBP13.75□□□□□ -0.21
DNMT3A-204ENST00000380756 RUBCNQ92622 972 aa13.75□□□□□ -0.21
DNMT3A-204ENST00000380756 HOOK2Q96ED9 719 aa13.75□□□□□ -0.21
DNMT3A-204ENST00000380756 ELAC2Q9BQ52 826 aaKnown RBP13.75□□□□□ -0.21
DNMT3A-204ENST00000380756 SART1O43290 800 aaKnown RBP13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 PPP1R37O75864 691 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 RWDD2BP57060 319 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 CASC4Q6P4E1 433 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 SLC17A8Q8NDX2 589 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 RILPQ96NA2 401 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 DIS3Q9Y2L1 958 aaKnown RBP13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 SYNGAP1Q96PV0 1343 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 SPATA31D1Q6ZQQ2 1576 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 GUCY2CP25092 1073 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 TMOD1P28289 359 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 GUCY1A3Q02108 690 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 QRICH1Q2TAL8 776 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms