RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 KIAA0753Q2KHM9 967 aa21.05■□□□□ 0.96
SMN2-202ENST00000380742 TPRNQ4KMQ1 711 aa21.05■□□□□ 0.96
SMN2-202ENST00000380742 HYIQ5T013 277 aa21.05■□□□□ 0.96
SMN2-202ENST00000380742 RESP18Q5W5W9 173 aa21.05■□□□□ 0.96
SMN2-202ENST00000380742 POTEGQ6S5H5 508 aa21.05■□□□□ 0.96
SMN2-202ENST00000380742 TRMT1LQ7Z2T5 733 aaKnown RBP21.05■□□□□ 0.96
SMN2-202ENST00000380742 C4orf19Q8IY42 314 aa21.05■□□□□ 0.96
SMN2-202ENST00000380742 TNS4Q8IZW8 715 aa21.05■□□□□ 0.96
SMN2-202ENST00000380742 GBP4Q96PP9 640 aa21.05■□□□□ 0.96
SMN2-202ENST00000380742 GRIN2DO15399 1336 aa21.04■□□□□ 0.96
SMN2-202ENST00000380742 ZBTB39O15060 712 aa21.04■□□□□ 0.96
SMN2-202ENST00000380742 CABYRO75952 493 aa21.04■□□□□ 0.96
SMN2-202ENST00000380742 LYPLA2O95372 231 aa21.04■□□□□ 0.96
SMN2-202ENST00000380742 CAPN2P17655 700 aa21.04■□□□□ 0.96
SMN2-202ENST00000380742 CMA1P23946 247 aa21.04■□□□□ 0.96
SMN2-202ENST00000380742 CHMP4BP1P59074 171 aa21.04■□□□□ 0.96
SMN2-202ENST00000380742 CKAP2LQ8IYA6 745 aa21.04■□□□□ 0.96
SMN2-202ENST00000380742 GLT1D1Q96MS3 346 aa21.04■□□□□ 0.96
SMN2-202ENST00000380742 PLIN2Q99541 437 aa21.04■□□□□ 0.96
SMN2-202ENST00000380742 KATNAL1Q9BW62 490 aa21.04■□□□□ 0.96
SMN2-202ENST00000380742 KIAA1024Q9UPX6 916 aa21.04■□□□□ 0.96
SMN2-202ENST00000380742 KDM3AQ9Y4C1 1321 aa21.03■□□□□ 0.96
SMN2-202ENST00000380742 A0A087X0B3 334 aa21.03■□□□□ 0.96
SMN2-202ENST00000380742 A0A1W2PQ27 194 aa21.03■□□□□ 0.96
SMN2-202ENST00000380742 A0A1W2PQ64 194 aa21.03■□□□□ 0.96
SMN2-202ENST00000380742 A0A1W2PQD8 194 aa21.03■□□□□ 0.96
SMN2-202ENST00000380742 TMEM150BA6NC51 233 aa21.03■□□□□ 0.96
SMN2-202ENST00000380742 SLC26A4O43511 780 aa21.03■□□□□ 0.96
SMN2-202ENST00000380742 DKC1O60832 514 aaKnown RBP eCLIP21.03■□□□□ 0.96
SMN2-202ENST00000380742 GADD45BO75293 160 aaPredicted RBP21.03■□□□□ 0.96
SMN2-202ENST00000380742 OATP04181 439 aa21.03■□□□□ 0.96
SMN2-202ENST00000380742 COL6A1P12109 1028 aa21.03■□□□□ 0.96
SMN2-202ENST00000380742 MUTP22033 750 aa21.03■□□□□ 0.96
SMN2-202ENST00000380742 NBPF20Q3BBV1 942 aa21.03■□□□□ 0.96
SMN2-202ENST00000380742 ANO5Q75V66 913 aa21.03■□□□□ 0.96
SMN2-202ENST00000380742 KCNK18Q7Z418 384 aa21.03■□□□□ 0.96
SMN2-202ENST00000380742 ATP8B4Q8TF62 1192 aa21.03■□□□□ 0.96
SMN2-202ENST00000380742 LRRC15Q8TF66 581 aa21.03■□□□□ 0.96
SMN2-202ENST00000380742 CALML4Q96GE6 196 aa21.03■□□□□ 0.96
SMN2-202ENST00000380742 PANK2Q9BZ23 570 aa21.03■□□□□ 0.96
SMN2-202ENST00000380742 DDX19AQ9NUU7 478 aaKnown RBP21.03■□□□□ 0.96
SMN2-202ENST00000380742 A0A1B0GVL5 298 aa21.02■□□□□ 0.96
SMN2-202ENST00000380742 PRPF40AO75400 957 aaKnown RBP21.02■□□□□ 0.96
SMN2-202ENST00000380742 TXLNAP40222 546 aa21.02■□□□□ 0.96
SMN2-202ENST00000380742 TMEM119Q4V9L6 283 aa21.02■□□□□ 0.96
SMN2-202ENST00000380742 XKR3Q5GH77 459 aa21.02■□□□□ 0.96
SMN2-202ENST00000380742 PIGOQ8TEQ8 1089 aa21.02■□□□□ 0.96
SMN2-202ENST00000380742 BBXQ8WY36 941 aaPredicted RBP21.02■□□□□ 0.96
SMN2-202ENST00000380742 VTI1AQ96AJ9 217 aa21.02■□□□□ 0.96
SMN2-202ENST00000380742 PAWRQ96IZ0 340 aaKnown RBP21.02■□□□□ 0.96
SMN2-202ENST00000380742 FAM167AQ96KS9 214 aa21.02■□□□□ 0.96
SMN2-202ENST00000380742 SENP6Q9GZR1 1112 aaPredicted RBP21.02■□□□□ 0.96
SMN2-202ENST00000380742 STARD7Q9NQZ5 370 aa21.02■□□□□ 0.96
SMN2-202ENST00000380742 EVPLQ92817 2033 aa21.02■□□□□ 0.96
SMN2-202ENST00000380742 DDX11L8A8MPP1 907 aa21.01■□□□□ 0.95
SMN2-202ENST00000380742 PLCG1P19174 1290 aa21.01■□□□□ 0.95
SMN2-202ENST00000380742 YWHABP31946 246 aaKnown RBP21.01■□□□□ 0.95
SMN2-202ENST00000380742 ITGA7Q13683 1181 aa21.01■□□□□ 0.95
SMN2-202ENST00000380742 PLA2G4FQ68DD2 849 aa21.01■□□□□ 0.95
SMN2-202ENST00000380742 CDK5RAP3Q96JB5 506 aa21.01■□□□□ 0.95
SMN2-202ENST00000380742 NACC1Q96RE7 527 aa21.01■□□□□ 0.95
SMN2-202ENST00000380742 SH2D3AQ9BRG2 576 aa21.01■□□□□ 0.95
SMN2-202ENST00000380742 NIFKQ9BYG3 293 aaKnown RBP21.01■□□□□ 0.95
SMN2-202ENST00000380742 NT5C3AQ9H0P0 336 aa21.01■□□□□ 0.95
SMN2-202ENST00000380742 GOLPH3LQ9H4A5 285 aa21.01■□□□□ 0.95
SMN2-202ENST00000380742 NRBP2Q9NSY0 501 aa21.01■□□□□ 0.95
SMN2-202ENST00000380742 FAM13BQ9NYF5 915 aa21.01■□□□□ 0.95
SMN2-202ENST00000380742 CCDC39Q9UFE4 941 aa21.01■□□□□ 0.95
SMN2-202ENST00000380742 SEPT9Q9UHD8 586 aaPredicted RBP21.01■□□□□ 0.95
SMN2-202ENST00000380742 TRPC6Q9Y210 931 aa21.01■□□□□ 0.95
SMN2-202ENST00000380742 HPSEQ9Y251 543 aa21.01■□□□□ 0.95
SMN2-202ENST00000380742 FAM237AA0A1B0GTK4 181 aa21■□□□□ 0.95
SMN2-202ENST00000380742 GOLGA6L4A6NEF3 574 aa21■□□□□ 0.95
SMN2-202ENST00000380742 CCDC85CA6NKD9 419 aa21■□□□□ 0.95
SMN2-202ENST00000380742 E9PMD0 336 aa21■□□□□ 0.95
SMN2-202ENST00000380742 HBP1O60381 514 aa21■□□□□ 0.95
SMN2-202ENST00000380742 SMIM10L2AP0DMW4 78 aa21■□□□□ 0.95
SMN2-202ENST00000380742 SMIM10L2BP0DMW5 78 aa21■□□□□ 0.95
SMN2-202ENST00000380742 INSRRP14616 1297 aa21■□□□□ 0.95
SMN2-202ENST00000380742 PFKFB1P16118 471 aa21■□□□□ 0.95
SMN2-202ENST00000380742 HIC1Q14526 733 aa21■□□□□ 0.95
SMN2-202ENST00000380742 PDILTQ8N807 584 aa21■□□□□ 0.95
SMN2-202ENST00000380742 FSIP1Q8NA03 581 aa21■□□□□ 0.95
SMN2-202ENST00000380742 RASSF8Q8NHQ8 419 aa21■□□□□ 0.95
SMN2-202ENST00000380742 MRPS27Q92552 414 aaKnown RBP21■□□□□ 0.95
SMN2-202ENST00000380742 HDAC6Q9UBN7 1215 aa21■□□□□ 0.95
SMN2-202ENST00000380742 ZBTB42B2RXF5 422 aa20.99■□□□□ 0.95
SMN2-202ENST00000380742 XRCC6P12956 609 aaKnown RBP eCLIP20.99■□□□□ 0.95
SMN2-202ENST00000380742 NPEPPSP55786 919 aa20.99■□□□□ 0.95
SMN2-202ENST00000380742 SOX10P56693 466 aa20.99■□□□□ 0.95
SMN2-202ENST00000380742 UBE2Q1Q7Z7E8 422 aa20.99■□□□□ 0.95
SMN2-202ENST00000380742 SLC43A3Q8NBI5 491 aa20.99■□□□□ 0.95
SMN2-202ENST00000380742 TRAPPC12Q8WVT3 735 aa20.99■□□□□ 0.95
SMN2-202ENST00000380742 C11orf49Q9H6J7 331 aa20.99■□□□□ 0.95
SMN2-202ENST00000380742 ANKEF1Q9NU02 776 aa20.99■□□□□ 0.95
SMN2-202ENST00000380742 LMBRD1Q9NUN5 540 aa20.99■□□□□ 0.95
SMN2-202ENST00000380742 BLOC1S4Q9NUP1 217 aa20.99■□□□□ 0.95
SMN2-202ENST00000380742 KCNH3Q9ULD8 1083 aa20.99■□□□□ 0.95
SMN2-202ENST00000380742 A0A0U1RQG5 324 aaPredicted RBP20.98■□□□□ 0.95
SMN2-202ENST00000380742 NDUFA8P51970 172 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms