RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 BACE1P56817 501 aa25.44■■□□□ 1.66
VPS16-201ENST00000380443 WHAMMP3Q1A5X7 153 aa25.44■■□□□ 1.66
VPS16-201ENST00000380443 CCDC122Q5T0U0 273 aa25.44■■□□□ 1.66
VPS16-201ENST00000380443 GPR161Q8N6U8 529 aaKnown RBP25.44■■□□□ 1.66
VPS16-201ENST00000380443 JAKMIP2Q96AA8 810 aa25.44■■□□□ 1.66
VPS16-201ENST00000380443 RPAP3Q9H6T3 665 aaPredicted RBP25.44■■□□□ 1.66
VPS16-201ENST00000380443 PICK1Q9NRD5 415 aa25.44■■□□□ 1.66
VPS16-201ENST00000380443 KCNH7Q9NS40 1196 aa25.44■■□□□ 1.66
VPS16-201ENST00000380443 ARMCX3Q9UH62 379 aaPredicted RBP25.44■■□□□ 1.66
VPS16-201ENST00000380443 RBBP6Q7Z6E9 1792 aaKnown RBP25.44■■□□□ 1.66
VPS16-201ENST00000380443 A0A0U1RQJ8 604 aa25.44■■□□□ 1.66
VPS16-201ENST00000380443 C19orf81C9J6K1 198 aa25.44■■□□□ 1.66
VPS16-201ENST00000380443 USO1O60763 962 aaKnown RBP25.44■■□□□ 1.66
VPS16-201ENST00000380443 GCNT3O95395 438 aa25.44■■□□□ 1.66
VPS16-201ENST00000380443 H2AFXP16104 143 aaPredicted RBP25.44■■□□□ 1.66
VPS16-201ENST00000380443 ITGB5P18084 799 aa25.44■■□□□ 1.66
VPS16-201ENST00000380443 EPS15P42566 896 aa25.44■■□□□ 1.66
VPS16-201ENST00000380443 CASP5P51878 434 aa25.44■■□□□ 1.66
VPS16-201ENST00000380443 MAPK8IP2Q13387 824 aaPredicted RBP25.44■■□□□ 1.66
VPS16-201ENST00000380443 MTMR2Q13614 643 aa25.44■■□□□ 1.66
VPS16-201ENST00000380443 NBPF12Q5TAG4 269 aaPredicted RBP25.44■■□□□ 1.66
VPS16-201ENST00000380443 RSRC2Q7L4I2 434 aaKnown RBP25.44■■□□□ 1.66
VPS16-201ENST00000380443 SRGAP1Q7Z6B7 1085 aa25.44■■□□□ 1.66
VPS16-201ENST00000380443 PIGOQ8TEQ8 1089 aa25.44■■□□□ 1.66
VPS16-201ENST00000380443 ATRIPQ8WXE1 791 aa25.44■■□□□ 1.66
VPS16-201ENST00000380443 RABGGTAQ92696 567 aa25.44■■□□□ 1.66
VPS16-201ENST00000380443 GOLGA1Q92805 767 aa25.44■■□□□ 1.66
VPS16-201ENST00000380443 RAVER2Q9HCJ3 691 aaKnown RBP25.44■■□□□ 1.66
VPS16-201ENST00000380443 P4HBP07237 508 aaKnown RBP25.43■■□□□ 1.66
VPS16-201ENST00000380443 HOXD13P35453 343 aa25.43■■□□□ 1.66
VPS16-201ENST00000380443 KIF5AQ12840 1032 aa25.43■■□□□ 1.66
VPS16-201ENST00000380443 TKFCQ3LXA3 575 aa25.43■■□□□ 1.66
VPS16-201ENST00000380443 RRAGAQ7L523 313 aa25.43■■□□□ 1.66
VPS16-201ENST00000380443 MIER3Q7Z3K6 550 aa25.43■■□□□ 1.66
VPS16-201ENST00000380443 ZNF280CQ8ND82 737 aa25.43■■□□□ 1.66
VPS16-201ENST00000380443 ZSWIM4Q9H7M6 989 aa25.43■■□□□ 1.66
VPS16-201ENST00000380443 AGO4Q9HCK5 861 aaKnown RBP25.43■■□□□ 1.66
VPS16-201ENST00000380443 COL20A1Q9P218 1284 aa25.43■■□□□ 1.66
VPS16-201ENST00000380443 GUCA1BQ9UMX6 200 aa25.43■■□□□ 1.66
VPS16-201ENST00000380443 LYPLA2O95372 231 aa25.42■■□□□ 1.66
VPS16-201ENST00000380443 MYBP10242 640 aa25.42■■□□□ 1.66
VPS16-201ENST00000380443 EPB41P11171 864 aaKnown RBP25.42■■□□□ 1.66
VPS16-201ENST00000380443 CPXCR1Q8N123 301 aa25.42■■□□□ 1.66
VPS16-201ENST00000380443 MYCT1Q8N699 235 aa25.42■■□□□ 1.66
VPS16-201ENST00000380443 GOLGA5Q8TBA6 731 aa25.42■■□□□ 1.66
VPS16-201ENST00000380443 LXNQ9BS40 222 aa25.42■■□□□ 1.66
VPS16-201ENST00000380443 PLCB1Q9NQ66 1216 aa25.42■■□□□ 1.66
VPS16-201ENST00000380443 DBR1Q9UK59 544 aaKnown RBP25.42■■□□□ 1.66
VPS16-201ENST00000380443 RSPH10B2B2RC85 870 aa25.42■■□□□ 1.66
VPS16-201ENST00000380443 PRPF6O94906 941 aaKnown RBP25.42■■□□□ 1.66
VPS16-201ENST00000380443 RSPH10BP0C881 870 aa25.42■■□□□ 1.66
VPS16-201ENST00000380443 MAPTP10636 758 aaKnown RBP25.42■■□□□ 1.66
VPS16-201ENST00000380443 KCNH2Q12809 1159 aa25.42■■□□□ 1.66
VPS16-201ENST00000380443 LRRN4CLQ8ND94 238 aa25.42■■□□□ 1.66
VPS16-201ENST00000380443 MKNK1Q9BUB5 465 aa25.42■■□□□ 1.66
VPS16-201ENST00000380443 PCDHB13Q9Y5F0 798 aa25.42■■□□□ 1.66
VPS16-201ENST00000380443 ARHGEF35A5YM69 484 aa25.41■■□□□ 1.66
VPS16-201ENST00000380443 LRRC53A6NM62 1247 aa25.41■■□□□ 1.66
VPS16-201ENST00000380443 EPHB6O15197 1021 aa25.41■■□□□ 1.66
VPS16-201ENST00000380443 AFPP02771 609 aaKnown RBP25.41■■□□□ 1.66
VPS16-201ENST00000380443 NR3C1P04150 777 aa25.41■■□□□ 1.66
VPS16-201ENST00000380443 SPP2Q13103 211 aa25.41■■□□□ 1.66
VPS16-201ENST00000380443 ALCAMQ13740 583 aa25.41■■□□□ 1.66
VPS16-201ENST00000380443 PURBQ96QR8 312 aaKnown RBP25.41■■□□□ 1.66
VPS16-201ENST00000380443 TIPINQ9BVW5 301 aa25.41■■□□□ 1.66
VPS16-201ENST00000380443 DEF6Q9H4E7 631 aa25.41■■□□□ 1.66
VPS16-201ENST00000380443 ARHGAP20Q9P2F6 1191 aa25.41■■□□□ 1.66
VPS16-201ENST00000380443 POTEB2H3BUK9 544 aa25.4■■□□□ 1.66
VPS16-201ENST00000380443 VWA5AO00534 786 aa25.4■■□□□ 1.66
VPS16-201ENST00000380443 DHX15O43143 795 aaKnown RBP25.4■■□□□ 1.66
VPS16-201ENST00000380443 PTPRAP18433 802 aa25.4■■□□□ 1.66
VPS16-201ENST00000380443 SLC9C1Q4G0N8 1177 aa25.4■■□□□ 1.66
VPS16-201ENST00000380443 SFMBT2Q5VUG0 894 aa25.4■■□□□ 1.66
VPS16-201ENST00000380443 FBXO38Q6PIJ6 1188 aa25.4■■□□□ 1.66
VPS16-201ENST00000380443 SMCR8Q8TEV9 937 aaPredicted RBP25.4■■□□□ 1.66
VPS16-201ENST00000380443 TRERF1Q96PN7 1200 aa25.4■■□□□ 1.66
VPS16-201ENST00000380443 LSM14BQ9BX40 385 aaKnown RBP25.4■■□□□ 1.66
VPS16-201ENST00000380443 LUC7LQ9NQ29 371 aaKnown RBP25.4■■□□□ 1.66
VPS16-201ENST00000380443 MYO6Q9UM54 1294 aa25.4■■□□□ 1.66
VPS16-201ENST00000380443 SCN4AP35499 1836 aa25.4■■□□□ 1.66
VPS16-201ENST00000380443 ASTN1O14525 1302 aa25.4■■□□□ 1.66
VPS16-201ENST00000380443 PPP1R12BO60237 982 aaPredicted RBP25.4■■□□□ 1.66
VPS16-201ENST00000380443 SERPING1P05155 500 aa25.4■■□□□ 1.66
VPS16-201ENST00000380443 XRCC5P13010 732 aaKnown RBP25.4■■□□□ 1.66
VPS16-201ENST00000380443 KIF11P52732 1056 aa25.4■■□□□ 1.66
VPS16-201ENST00000380443 RPS6P62753 249 aaKnown RBP25.4■■□□□ 1.66
VPS16-201ENST00000380443 MTMR1Q13613 665 aa25.4■■□□□ 1.66
VPS16-201ENST00000380443 MYBPC2Q14324 1141 aa25.4■■□□□ 1.66
VPS16-201ENST00000380443 MUM1L1Q5H9M0 696 aa25.4■■□□□ 1.66
VPS16-201ENST00000380443 ANO9A1A5B4 782 aa25.39■■□□□ 1.65
VPS16-201ENST00000380443 GTPBP10A4D1E9 387 aaKnown RBP25.39■■□□□ 1.65
VPS16-201ENST00000380443 MAFGO15525 162 aa25.39■■□□□ 1.65
VPS16-201ENST00000380443 NOL4O94818 638 aa25.39■■□□□ 1.65
VPS16-201ENST00000380443 RNF207Q6ZRF8 634 aa25.39■■□□□ 1.65
VPS16-201ENST00000380443 ZNF720Q7Z2F6 126 aa25.39■■□□□ 1.65
VPS16-201ENST00000380443 RDM1Q8NG50 284 aa25.39■■□□□ 1.65
VPS16-201ENST00000380443 SCAF8Q9UPN6 1271 aaKnown RBP25.39■■□□□ 1.65
VPS16-201ENST00000380443 ASTN2O75129 1339 aaPredicted RBP25.38■■□□□ 1.65
VPS16-201ENST00000380443 KIF3CO14782 793 aa25.38■■□□□ 1.65
VPS16-201ENST00000380443 AKR1B10O60218 316 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms