RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 RSRC1Q96IZ7 334 aaKnown RBP13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 ZNF287Q9HBT7 754 aa13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 ZNF233A6NK53 670 aa13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 RAD51CO43502 376 aa13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 MYBL1P10243 752 aa13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 PRPHP41219 470 aa13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 THEMIS2Q5TEJ8 643 aa13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 PIGOQ8TEQ8 1089 aa13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 RPGRIP1Q96KN7 1286 aa13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 SH3GL3Q99963 347 aa13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 L3MBTL1Q9Y468 752 aa13.61□□□□□ -0.23
PRPF40B-202ENST00000380281 BCL9LQ86UU0 1499 aa13.6□□□□□ -0.23
PRPF40B-202ENST00000380281 LAD1O00515 517 aa13.6□□□□□ -0.23
PRPF40B-202ENST00000380281 EDIL3O43854 480 aa13.6□□□□□ -0.23
PRPF40B-202ENST00000380281 BUB1BO60566 1050 aaPredicted RBP13.6□□□□□ -0.23
PRPF40B-202ENST00000380281 PLA2G4BP0C869 781 aa13.6□□□□□ -0.23
PRPF40B-202ENST00000380281 KCNH2Q12809 1159 aa13.6□□□□□ -0.23
PRPF40B-202ENST00000380281 QPCTQ16769 361 aa13.6□□□□□ -0.23
PRPF40B-202ENST00000380281 GUF1Q8N442 669 aaKnown RBP13.6□□□□□ -0.23
PRPF40B-202ENST00000380281 CASKIN2Q8WXE0 1202 aa13.6□□□□□ -0.23
PRPF40B-202ENST00000380281 SH2D3AQ9BRG2 576 aa13.6□□□□□ -0.23
PRPF40B-202ENST00000380281 SPZ1Q9BXG8 430 aa13.6□□□□□ -0.23
PRPF40B-202ENST00000380281 CELF4Q9BZC1 486 aaKnown RBP13.6□□□□□ -0.23
PRPF40B-202ENST00000380281 JMJD4Q9H9V9 463 aa13.6□□□□□ -0.23
PRPF40B-202ENST00000380281 GOPCQ9HD26 462 aa13.6□□□□□ -0.23
PRPF40B-202ENST00000380281 DDX4Q9NQI0 724 aaKnown RBP13.6□□□□□ -0.23
PRPF40B-202ENST00000380281 EMILIN3Q9NT22 766 aa13.6□□□□□ -0.23
PRPF40B-202ENST00000380281 ZBTB39O15060 712 aa13.6□□□□□ -0.23
PRPF40B-202ENST00000380281 CASP4P49662 377 aa13.6□□□□□ -0.23
PRPF40B-202ENST00000380281 EPHB4P54760 987 aa13.6□□□□□ -0.23
PRPF40B-202ENST00000380281 PTK2Q05397 1052 aa13.6□□□□□ -0.23
PRPF40B-202ENST00000380281 ASIC2Q16515 512 aa13.6□□□□□ -0.23
PRPF40B-202ENST00000380281 HGSNATQ68CP4 663 aa13.6□□□□□ -0.23
PRPF40B-202ENST00000380281 CCDC26Q8TAB7 109 aa13.6□□□□□ -0.23
PRPF40B-202ENST00000380281 CYP2W1Q8TAV3 490 aa13.6□□□□□ -0.23
PRPF40B-202ENST00000380281 HAS1Q92839 578 aa13.6□□□□□ -0.23
PRPF40B-202ENST00000380281 YIPF3Q9GZM5 350 aa13.6□□□□□ -0.23
PRPF40B-202ENST00000380281 SHANK3Q9BYB0 1731 aa13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 TLDC2A0PJX2 215 aa13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 TMEM110-MUSTN1A8MSY1 372 aa13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 NOL4O94818 638 aa13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 FGFR1OPO95684 399 aaKnown RBP13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 FAM107AO95990 144 aa13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 TMOD1P28289 359 aa13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 PLCB4Q15147 1175 aa13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 KDM7AQ6ZMT4 941 aa13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 IFT20Q8IY31 132 aa13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 ELMO3Q96BJ8 720 aa13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 MTMR9Q96QG7 549 aa13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 EPB41P11171 864 aaKnown RBP13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 ITGA4P13612 1032 aa13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 MDH1P40925 334 aaKnown RBP13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 C6orf89Q6UWU4 347 aa13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 ZFPM1Q8IX07 1006 aa13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 U2AF1L4Q8WU68 220 aaKnown RBP13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 CUEDC2Q9H467 287 aa13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 USP40Q9NVE5 1235 aa13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 MTMR4Q9NYA4 1195 aa13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 AMACRQ9UHK6 382 aa13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 GGA1Q9UJY5 639 aa13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 PCDHA1Q9Y5I3 950 aa13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 SCTRP47872 440 aa13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 NFIAQ12857 509 aa13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 ZNF211Q13398 564 aaPredicted RBP13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 RPS6KA1Q15418 735 aa13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 ANKRD20A8PQ5CZ79 823 aa13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 TRAPPC3LQ5T215 181 aa13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 GALNT17Q6IS24 598 aa13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 HIBCHQ6NVY1 386 aaPredicted RBP13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 MMGT1Q8N4V1 131 aa13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 SAAL1Q96ER3 474 aa13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 RGL1Q9NZL6 768 aa13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 PLAAQ9Y263 795 aa13.59□□□□□ -0.23
PRPF40B-202ENST00000380281 HGSO14964 777 aaPredicted RBP13.58□□□□□ -0.24
PRPF40B-202ENST00000380281 GFPT2O94808 682 aa13.58□□□□□ -0.24
PRPF40B-202ENST00000380281 GDF11O95390 407 aa13.58□□□□□ -0.24
PRPF40B-202ENST00000380281 MYL1P05976 194 aa13.58□□□□□ -0.24
PRPF40B-202ENST00000380281 ARHGAP44Q17R89 818 aa13.58□□□□□ -0.24
PRPF40B-202ENST00000380281 ALS2CLQ60I27 953 aa13.58□□□□□ -0.24
PRPF40B-202ENST00000380281 C16orf86Q6ZW13 317 aa13.58□□□□□ -0.24
PRPF40B-202ENST00000380281 DAGLBQ8NCG7 672 aa13.58□□□□□ -0.24
PRPF40B-202ENST00000380281 BORCS6Q96GS4 357 aa13.58□□□□□ -0.24
PRPF40B-202ENST00000380281 PURBQ96QR8 312 aaKnown RBP13.58□□□□□ -0.24
PRPF40B-202ENST00000380281 NOD2Q9HC29 1040 aa13.58□□□□□ -0.24
PRPF40B-202ENST00000380281 POLLQ9UGP5 575 aa13.58□□□□□ -0.24
PRPF40B-202ENST00000380281 MED24O75448 989 aa13.58□□□□□ -0.24
PRPF40B-202ENST00000380281 GCNT3O95395 438 aa13.58□□□□□ -0.24
PRPF40B-202ENST00000380281 MYBP10242 640 aa13.58□□□□□ -0.24
PRPF40B-202ENST00000380281 SLC8A1P32418 973 aa13.58□□□□□ -0.24
PRPF40B-202ENST00000380281 ZNF76P36508 570 aa13.58□□□□□ -0.24
PRPF40B-202ENST00000380281 GRAPQ13588 217 aa13.58□□□□□ -0.24
PRPF40B-202ENST00000380281 NBPF9Q3BBW0 867 aa13.58□□□□□ -0.24
PRPF40B-202ENST00000380281 SFR1Q86XK3 245 aa13.58□□□□□ -0.24
PRPF40B-202ENST00000380281 GRAPLQ8TC17 118 aaPredicted RBP13.58□□□□□ -0.24
PRPF40B-202ENST00000380281 SCFD1Q8WVM8 642 aa13.58□□□□□ -0.24
PRPF40B-202ENST00000380281 DNAJC19Q96DA6 116 aa13.58□□□□□ -0.24
PRPF40B-202ENST00000380281 KCNQ5Q9NR82 932 aa13.58□□□□□ -0.24
PRPF40B-202ENST00000380281 ATP6V0A2Q9Y487 856 aa13.58□□□□□ -0.24
PRPF40B-202ENST00000380281 TIAM2Q8IVF5 1701 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms