RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 TPBGLP0DKB5 382 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 MARCKSP29966 332 aaPredicted RBP8.13□□□□□ -1.11
CDKL5-201ENST00000379989 STIP1P31948 543 aaKnown RBP8.13□□□□□ -1.11
CDKL5-201ENST00000379989 GALNTL6Q49A17 601 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 ERMARDQ5T6L9 678 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 CCDC129Q6ZRS4 1044 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 SGMS1Q86VZ5 419 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 TRIM50Q86XT4 487 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 OR2W6PQ8NHA6 318 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 AGBL1Q96MI9 1066 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 PPP1R12CQ9BZL4 782 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 CTNNAL1Q9UBT7 734 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 MAN1B1Q9UKM7 699 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 ITM2BQ9Y287 266 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 R3HDM2Q9Y2K5 976 aaKnown RBP8.13□□□□□ -1.11
CDKL5-201ENST00000379989 H0YGN5 161 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 ADAMTS2O95450 1211 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 ASLP04424 464 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 ITGA2BP08514 1039 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 GBP1P32455 592 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 PIP4K2AP48426 406 aaPredicted RBP8.13□□□□□ -1.11
CDKL5-201ENST00000379989 ZNF131P52739 623 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 ITPK1Q13572 414 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 ZC2HC1CQ53FD0 456 aaPredicted RBP8.13□□□□□ -1.11
CDKL5-201ENST00000379989 THOC7Q6I9Y2 204 aaKnown RBP8.13□□□□□ -1.11
CDKL5-201ENST00000379989 C8orf74Q6P047 294 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 SHC4Q6S5L8 630 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 ASRGL1Q7L266 308 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 NME8Q8N427 588 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 ATP8B4Q8TF62 1192 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 ABTB1Q969K4 478 aaPredicted RBP8.13□□□□□ -1.11
CDKL5-201ENST00000379989 GBP5Q96PP8 586 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 LRRC2Q9BYS8 371 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 EHD2Q9NZN4 543 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 DDX25Q9UHL0 483 aaKnown RBP8.13□□□□□ -1.11
CDKL5-201ENST00000379989 GGT7Q9UJ14 662 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 USP21Q9UK80 565 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 SNX12Q9UMY4 172 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 RTCBQ9Y3I0 505 aaKnown RBP8.13□□□□□ -1.11
CDKL5-201ENST00000379989 DAAM1Q9Y4D1 1078 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 NFS1Q9Y697 457 aa8.13□□□□□ -1.11
CDKL5-201ENST00000379989 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.13□□□□□ -1.11
CDKL5-201ENST00000379989 ITIH6Q6UXX5 1313 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 CETN3O15182 167 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 PEX11AO75192 247 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 ETS2P15036 469 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 PSMD7P51665 324 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 USH1GQ495M9 461 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 SLC44A4Q53GD3 710 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 SH2D4BQ5SQS7 431 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 RBM26Q5T8P6 1007 aaKnown RBP8.12□□□□□ -1.11
CDKL5-201ENST00000379989 RASIP1Q5U651 963 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 OTUD7BQ6GQQ9 843 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 C14orf80Q86SX3 495 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 DEPTORQ8TB45 409 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 ASAP3Q8TDY4 903 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 IFT81Q8WYA0 676 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 FAM129AQ9BZQ8 928 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 PLCB1Q9NQ66 1216 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 TRIM33Q9UPN9 1127 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 TCRBV5S4A2TA0A5A2 114 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 RCCD1A6NED2 376 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 GPAA1O43292 621 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 ZPR1O75312 459 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 SHBGP04278 402 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 KCNA3P22001 575 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 GPSM2P81274 684 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 ZNF844Q08AG5 666 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 BIRC3Q13489 604 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 ODF2Q5BJF6 829 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 LRIG3Q6UXM1 1119 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 IFT20Q8IY31 132 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 MB21D2Q8IYB1 491 aaPredicted RBP8.12□□□□□ -1.11
CDKL5-201ENST00000379989 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.12□□□□□ -1.11
CDKL5-201ENST00000379989 HELBQ8NG08 1087 aaPredicted RBP8.12□□□□□ -1.11
CDKL5-201ENST00000379989 MDM1Q8TC05 714 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 RSPH1Q8WYR4 309 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 TAF4BQ92750 862 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 LENG1Q96BZ8 264 aaPredicted RBP8.12□□□□□ -1.11
CDKL5-201ENST00000379989 DHTKD1Q96HY7 919 aaPredicted RBP8.12□□□□□ -1.11
CDKL5-201ENST00000379989 GJD4Q96KN9 370 aaPredicted RBP8.12□□□□□ -1.11
CDKL5-201ENST00000379989 LACRTQ9GZZ8 138 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 RAB17Q9H0T7 212 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 LUC7LQ9NQ29 371 aaKnown RBP8.12□□□□□ -1.11
CDKL5-201ENST00000379989 ARHGEF38Q9NXL2 777 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 N6AMT1Q9Y5N5 214 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 USH1CQ9Y6N9 552 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 COMMD3-BMI1R4GMX3 469 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 CCDC88AQ3V6T2 1871 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 AKR1B10O60218 316 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 CTNND1O60716 968 aaKnown RBP8.12□□□□□ -1.11
CDKL5-201ENST00000379989 LDHAP00338 332 aaKnown RBP8.12□□□□□ -1.11
CDKL5-201ENST00000379989 PDGFRBP09619 1106 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 PDE6AP16499 860 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 HSPA9P38646 679 aaKnown RBP8.12□□□□□ -1.11
CDKL5-201ENST00000379989 MCAMP43121 646 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 ZAP70P43403 619 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 PTDSS1P48651 473 aaKnown RBP8.12□□□□□ -1.11
CDKL5-201ENST00000379989 COPS2P61201 443 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 HPCAP84074 193 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms