RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 JPH1Q9HDC5 661 aaPredicted RBP20.38■□□□□ 0.85
PDLIM4-202ENST00000379018 CLEC1BQ9P126 229 aa20.38■□□□□ 0.85
PDLIM4-202ENST00000379018 PADI3Q9ULW8 664 aa20.38■□□□□ 0.85
PDLIM4-202ENST00000379018 UBIAD1Q9Y5Z9 338 aa20.38■□□□□ 0.85
PDLIM4-202ENST00000379018 PLXNA4Q9HCM2 1894 aa20.37■□□□□ 0.85
PDLIM4-202ENST00000379018 TMEM221A6NGB7 291 aa20.37■□□□□ 0.85
PDLIM4-202ENST00000379018 CCDC69A6NI79 296 aa20.37■□□□□ 0.85
PDLIM4-202ENST00000379018 RRN3P2A6NIE6 340 aa20.37■□□□□ 0.85
PDLIM4-202ENST00000379018 M0R296 226 aa20.37■□□□□ 0.85
PDLIM4-202ENST00000379018 CHMLP26374 656 aa20.37■□□□□ 0.85
PDLIM4-202ENST00000379018 NFX1Q12986 1120 aaKnown RBP20.37■□□□□ 0.85
PDLIM4-202ENST00000379018 EFHBQ8N7U6 833 aa20.37■□□□□ 0.85
PDLIM4-202ENST00000379018 FTHL17Q9BXU8 183 aa20.37■□□□□ 0.85
PDLIM4-202ENST00000379018 PCDHA6Q9UN73 950 aa20.37■□□□□ 0.85
PDLIM4-202ENST00000379018 PCDHA8Q9Y5H6 950 aa20.37■□□□□ 0.85
PDLIM4-202ENST00000379018 PER2O15055 1255 aa20.36■□□□□ 0.85
PDLIM4-202ENST00000379018 PRC1O43663 620 aa20.36■□□□□ 0.85
PDLIM4-202ENST00000379018 RBM10P98175 930 aaKnown RBP20.36■□□□□ 0.85
PDLIM4-202ENST00000379018 HEATR3Q7Z4Q2 680 aa20.36■□□□□ 0.85
PDLIM4-202ENST00000379018 SMRP1Q8NCR6 262 aa20.36■□□□□ 0.85
PDLIM4-202ENST00000379018 PRSS33Q8NF86 280 aa20.36■□□□□ 0.85
PDLIM4-202ENST00000379018 RPGRIP1Q96KN7 1286 aa20.36■□□□□ 0.85
PDLIM4-202ENST00000379018 PPP1R16BQ96T49 567 aa20.36■□□□□ 0.85
PDLIM4-202ENST00000379018 JADE2Q9NQC1 790 aa20.36■□□□□ 0.85
PDLIM4-202ENST00000379018 SLC9A2Q9UBY0 812 aa20.36■□□□□ 0.85
PDLIM4-202ENST00000379018 USP15Q9Y4E8 981 aaPredicted RBP20.36■□□□□ 0.85
PDLIM4-202ENST00000379018 EYA4O95677 639 aa20.35■□□□□ 0.85
PDLIM4-202ENST00000379018 GLP2RO95838 553 aa20.35■□□□□ 0.85
PDLIM4-202ENST00000379018 GNAQP50148 359 aa20.35■□□□□ 0.85
PDLIM4-202ENST00000379018 PLCB4Q15147 1175 aa20.35■□□□□ 0.85
PDLIM4-202ENST00000379018 IER5LQ5T953 404 aa20.35■□□□□ 0.85
PDLIM4-202ENST00000379018 TRIM67Q6ZTA4 783 aa20.35■□□□□ 0.85
PDLIM4-202ENST00000379018 SUGP1Q8IWZ8 645 aaKnown RBP20.35■□□□□ 0.85
PDLIM4-202ENST00000379018 PGBD1Q96JS3 809 aa20.35■□□□□ 0.85
PDLIM4-202ENST00000379018 YTHDC1Q96MU7 727 aaKnown RBP20.35■□□□□ 0.85
PDLIM4-202ENST00000379018 LZTS2Q9BRK4 669 aa20.35■□□□□ 0.85
PDLIM4-202ENST00000379018 CELF4Q9BZC1 486 aaKnown RBP20.35■□□□□ 0.85
PDLIM4-202ENST00000379018 TLE6Q9H808 572 aa20.35■□□□□ 0.85
PDLIM4-202ENST00000379018 RBM8AQ9Y5S9 174 aaKnown RBP20.35■□□□□ 0.85
PDLIM4-202ENST00000379018 IGSF9BQ9UPX0 1349 aa20.34■□□□□ 0.85
PDLIM4-202ENST00000379018 TBKBP1A7MCY6 615 aa20.34■□□□□ 0.85
PDLIM4-202ENST00000379018 NAALADL2Q58DX5 795 aa20.34■□□□□ 0.85
PDLIM4-202ENST00000379018 SDF4Q9BRK5 362 aa20.34■□□□□ 0.85
PDLIM4-202ENST00000379018 TMX1Q9H3N1 280 aa20.34■□□□□ 0.85
PDLIM4-202ENST00000379018 HCSTQ9UBK5 93 aa20.34■□□□□ 0.85
PDLIM4-202ENST00000379018 PCDHB7Q9Y5E2 793 aa20.34■□□□□ 0.85
PDLIM4-202ENST00000379018 DDX39AO00148 427 aaKnown RBP20.33■□□□□ 0.85
PDLIM4-202ENST00000379018 RPLP2P05387 115 aaKnown RBP20.33■□□□□ 0.85
PDLIM4-202ENST00000379018 SP100P23497 879 aaPredicted RBP20.33■□□□□ 0.85
PDLIM4-202ENST00000379018 ACTR2P61160 394 aa20.33■□□□□ 0.85
PDLIM4-202ENST00000379018 ZXDAP98168 799 aa20.33■□□□□ 0.85
PDLIM4-202ENST00000379018 KRT76Q01546 638 aa20.33■□□□□ 0.85
PDLIM4-202ENST00000379018 CYP2W1Q8TAV3 490 aa20.33■□□□□ 0.85
PDLIM4-202ENST00000379018 MAP3K14Q99558 947 aa20.33■□□□□ 0.85
PDLIM4-202ENST00000379018 APOL5Q9BWW9 433 aa20.33■□□□□ 0.85
PDLIM4-202ENST00000379018 LRRC2Q9BYS8 371 aa20.33■□□□□ 0.85
PDLIM4-202ENST00000379018 KCNH7Q9NS40 1196 aa20.33■□□□□ 0.85
PDLIM4-202ENST00000379018 PCDHB12Q9Y5F1 795 aa20.33■□□□□ 0.85
PDLIM4-202ENST00000379018 PCDHA2Q9Y5H9 948 aa20.33■□□□□ 0.85
PDLIM4-202ENST00000379018 ZDBF2Q9HCK1 2354 aa20.32■□□□□ 0.84
PDLIM4-202ENST00000379018 DENND3A2RUS2 1198 aa20.32■□□□□ 0.84
PDLIM4-202ENST00000379018 SH2B2O14492 632 aaPredicted RBP20.32■□□□□ 0.84
PDLIM4-202ENST00000379018 SGSM2O43147 1006 aa20.32■□□□□ 0.84
PDLIM4-202ENST00000379018 SMARCA1P28370 1054 aa20.32■□□□□ 0.84
PDLIM4-202ENST00000379018 STAT5BP51692 787 aa20.32■□□□□ 0.84
PDLIM4-202ENST00000379018 COASYQ13057 564 aa20.32■□□□□ 0.84
PDLIM4-202ENST00000379018 MTHFD1LQ6UB35 978 aa20.32■□□□□ 0.84
PDLIM4-202ENST00000379018 THNSL1Q8IYQ7 743 aa20.32■□□□□ 0.84
PDLIM4-202ENST00000379018 CRIPAKQ8N1N5 446 aa20.32■□□□□ 0.84
PDLIM4-202ENST00000379018 SQORQ9Y6N5 450 aa20.32■□□□□ 0.84
PDLIM4-202ENST00000379018 FNDC1Q4ZHG4 1894 aaPredicted RBP20.31■□□□□ 0.84
PDLIM4-202ENST00000379018 LOC730098B7Z3J9 87 aa20.31■□□□□ 0.84
PDLIM4-202ENST00000379018 BACH1O14867 736 aa20.31■□□□□ 0.84
PDLIM4-202ENST00000379018 MGEA5O60502 916 aa20.31■□□□□ 0.84
PDLIM4-202ENST00000379018 ARP10275 920 aa20.31■□□□□ 0.84
PDLIM4-202ENST00000379018 SARSP49591 514 aaKnown RBP20.31■□□□□ 0.84
PDLIM4-202ENST00000379018 PTPN5P54829 565 aa20.31■□□□□ 0.84
PDLIM4-202ENST00000379018 COL9A3Q14050 684 aaPredicted RBP20.31■□□□□ 0.84
PDLIM4-202ENST00000379018 MICU3Q86XE3 530 aa20.31■□□□□ 0.84
PDLIM4-202ENST00000379018 TNPO1Q92973 898 aaKnown RBP20.31■□□□□ 0.84
PDLIM4-202ENST00000379018 MXRA8Q9BRK3 442 aa20.31■□□□□ 0.84
PDLIM4-202ENST00000379018 PHF7Q9BWX1 381 aaPredicted RBP20.31■□□□□ 0.84
PDLIM4-202ENST00000379018 TLR9Q9NR96 1032 aa20.31■□□□□ 0.84
PDLIM4-202ENST00000379018 FAM86C1Q9NVL1 165 aa20.31■□□□□ 0.84
PDLIM4-202ENST00000379018 SLC12A7Q9Y666 1083 aa20.31■□□□□ 0.84
PDLIM4-202ENST00000379018 EVPLQ92817 2033 aa20.31■□□□□ 0.84
PDLIM4-202ENST00000379018 SMIM35A0A1B0GVV1 85 aa20.3■□□□□ 0.84
PDLIM4-202ENST00000379018 MAFGO15525 162 aa20.3■□□□□ 0.84
PDLIM4-202ENST00000379018 RPS6KA5O75582 802 aa20.3■□□□□ 0.84
PDLIM4-202ENST00000379018 MCM5P33992 734 aa20.3■□□□□ 0.84
PDLIM4-202ENST00000379018 APOBRQ0VD83 1088 aa20.3■□□□□ 0.84
PDLIM4-202ENST00000379018 FAM102BQ5T8I3 360 aa20.3■□□□□ 0.84
PDLIM4-202ENST00000379018 PLPP4Q5VZY2 271 aa20.3■□□□□ 0.84
PDLIM4-202ENST00000379018 LLGL2Q6P1M3 1020 aa20.3■□□□□ 0.84
PDLIM4-202ENST00000379018 TRMT1LQ7Z2T5 733 aaKnown RBP20.3■□□□□ 0.84
PDLIM4-202ENST00000379018 VN1R2Q8NFZ6 395 aa20.3■□□□□ 0.84
PDLIM4-202ENST00000379018 MAP4K1Q92918 833 aa20.3■□□□□ 0.84
PDLIM4-202ENST00000379018 ADAM2Q99965 735 aa20.3■□□□□ 0.84
PDLIM4-202ENST00000379018 CDHR5Q9HBB8 845 aa20.3■□□□□ 0.84
PDLIM4-202ENST00000379018 AAASQ9NRG9 546 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms