RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 WDR11Q9BZH6 1224 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 THEGQ9P2T0 379 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 AXIN2Q9Y2T1 843 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 CNTNAP5Q8WYK1 1306 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 A0A0G2JLW4 131 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 CD44P16070 742 aaKnown RBP9.47□□□□□ -0.89
PCDH9-202ENST00000377865 SLCO1A2P46721 670 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 HERVK_113P62684 666 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 IRX1P78414 480 aaPredicted RBP9.47□□□□□ -0.89
PCDH9-202ENST00000377865 ACTN3Q08043 901 aaPredicted RBP9.47□□□□□ -0.89
PCDH9-202ENST00000377865 RIN2Q8WYP3 895 aaPredicted RBP9.47□□□□□ -0.89
PCDH9-202ENST00000377865 RFFLQ8WZ73 363 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 TTC25Q96NG3 672 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 FAM129AQ9BZQ8 928 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 VCPKMTQ9H867 229 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 PARVGQ9HBI0 331 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 EPB41L4AQ9HCS5 686 aaPredicted RBP9.47□□□□□ -0.89
PCDH9-202ENST00000377865 HAUS2Q9NVX0 235 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 PKD2L1Q9P0L9 805 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 CFBP00751 764 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 SETSIPP0DME0 302 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 PTK2Q05397 1052 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 SPARCL1Q14515 664 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 HLFQ16534 295 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 DAGLBQ8NCG7 672 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 GDAP1Q8TB36 358 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 WNT8AQ9H1J5 351 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 SUFUQ9UMX1 484 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 JCADQ9P266 1359 aa9.46□□□□□ -0.89
PCDH9-202ENST00000377865 KNDC1Q76NI1 1749 aa9.46□□□□□ -0.89
PCDH9-202ENST00000377865 USP17L3A6NCW0 530 aa9.46□□□□□ -0.89
PCDH9-202ENST00000377865 USP17L4A6NCW7 530 aa9.46□□□□□ -0.89
PCDH9-202ENST00000377865 STAM2O75886 525 aa9.46□□□□□ -0.89
PCDH9-202ENST00000377865 FCER1AP12319 257 aa9.46□□□□□ -0.89
PCDH9-202ENST00000377865 HSPA9P38646 679 aaKnown RBP9.46□□□□□ -0.89
PCDH9-202ENST00000377865 CDK8P49336 464 aa9.46□□□□□ -0.89
PCDH9-202ENST00000377865 SLFN13Q68D06 897 aa9.46□□□□□ -0.89
PCDH9-202ENST00000377865 USP17L1Q7RTZ2 530 aa9.46□□□□□ -0.89
PCDH9-202ENST00000377865 TEX9Q8N6V9 391 aa9.46□□□□□ -0.89
PCDH9-202ENST00000377865 TSC22D3Q99576 134 aa9.46□□□□□ -0.89
PCDH9-202ENST00000377865 SLC40A1Q9NP59 571 aa9.46□□□□□ -0.89
PCDH9-202ENST00000377865 DCP1AQ9NPI6 582 aaPredicted RBP9.46□□□□□ -0.89
PCDH9-202ENST00000377865 DLG5Q8TDM6 1919 aa9.46□□□□□ -0.89
PCDH9-202ENST00000377865 LOC102724159A0A0B4J2E5 919 aa9.46□□□□□ -0.89
PCDH9-202ENST00000377865 HNRNPCL1O60812 293 aaKnown RBP9.46□□□□□ -0.89
PCDH9-202ENST00000377865 PRPF6O94906 941 aaKnown RBP9.46□□□□□ -0.89
PCDH9-202ENST00000377865 NR3C1P04150 777 aa9.46□□□□□ -0.89
PCDH9-202ENST00000377865 SESN3P58005 492 aa9.46□□□□□ -0.89
PCDH9-202ENST00000377865 SEPT6Q14141 434 aa9.46□□□□□ -0.89
PCDH9-202ENST00000377865 PWP2Q15269 919 aaKnown RBP9.46□□□□□ -0.89
PCDH9-202ENST00000377865 SYDE1Q6ZW31 735 aaPredicted RBP9.46□□□□□ -0.89
PCDH9-202ENST00000377865 MAEAQ7L5Y9 396 aa9.46□□□□□ -0.89
PCDH9-202ENST00000377865 TEKT1Q969V4 418 aa9.46□□□□□ -0.89
PCDH9-202ENST00000377865 RNPC3Q96LT9 517 aaKnown RBP9.46□□□□□ -0.89
PCDH9-202ENST00000377865 MRPL47Q9HD33 250 aaKnown RBP9.46□□□□□ -0.89
PCDH9-202ENST00000377865 UBE2TQ9NPD8 197 aaPredicted RBP9.46□□□□□ -0.89
PCDH9-202ENST00000377865 FGFR1OP2Q9NVK5 253 aa9.46□□□□□ -0.89
PCDH9-202ENST00000377865 DNAJC12Q9UKB3 198 aa9.46□□□□□ -0.89
PCDH9-202ENST00000377865 ZNF148Q9UQR1 794 aa9.46□□□□□ -0.89
PCDH9-202ENST00000377865 SNX24Q9Y343 169 aa9.46□□□□□ -0.89
PCDH9-202ENST00000377865 DDX39AO00148 427 aaKnown RBP9.46□□□□□ -0.9
PCDH9-202ENST00000377865 CASQ2O14958 399 aaPredicted RBP9.46□□□□□ -0.9
PCDH9-202ENST00000377865 HSPA1LP34931 641 aa9.46□□□□□ -0.9
PCDH9-202ENST00000377865 GPC5P78333 572 aa9.46□□□□□ -0.9
PCDH9-202ENST00000377865 CACNB1Q02641 598 aaPredicted RBP9.46□□□□□ -0.9
PCDH9-202ENST00000377865 KNOP1Q1ED39 458 aaKnown RBP9.46□□□□□ -0.9
PCDH9-202ENST00000377865 HSP90AA5PQ58FG0 334 aa9.46□□□□□ -0.9
PCDH9-202ENST00000377865 SH2D3CQ8N5H7 860 aa9.46□□□□□ -0.9
PCDH9-202ENST00000377865 USP38Q8NB14 1042 aa9.46□□□□□ -0.9
PCDH9-202ENST00000377865 COA7Q96BR5 231 aa9.46□□□□□ -0.9
PCDH9-202ENST00000377865 TMEM47Q9BQJ4 181 aa9.46□□□□□ -0.9
PCDH9-202ENST00000377865 PITPNM3Q9BZ71 974 aa9.46□□□□□ -0.9
PCDH9-202ENST00000377865 DDX47Q9H0S4 455 aaKnown RBP9.46□□□□□ -0.9
PCDH9-202ENST00000377865 EXOC1LA0A1B0GW35 172 aa9.46□□□□□ -0.9
PCDH9-202ENST00000377865 FAM205CA6NFA0 338 aa9.46□□□□□ -0.9
PCDH9-202ENST00000377865 POC1B-GALNT4F8VUJ3 575 aa9.46□□□□□ -0.9
PCDH9-202ENST00000377865 CLIC2O15247 247 aa9.46□□□□□ -0.9
PCDH9-202ENST00000377865 ERFEQ4G0M1 354 aa9.46□□□□□ -0.9
PCDH9-202ENST00000377865 SBK1Q52WX2 424 aa9.46□□□□□ -0.9
PCDH9-202ENST00000377865 USP17L2Q6R6M4 530 aa9.46□□□□□ -0.9
PCDH9-202ENST00000377865 SDCCAG8Q86SQ7 713 aaPredicted RBP9.46□□□□□ -0.9
PCDH9-202ENST00000377865 CFAP61Q8NHU2 1237 aa9.46□□□□□ -0.9
PCDH9-202ENST00000377865 PIGBQ92521 554 aa9.46□□□□□ -0.9
PCDH9-202ENST00000377865 FAM212AQ96EL1 285 aa9.46□□□□□ -0.9
PCDH9-202ENST00000377865 DYNLL2Q96FJ2 89 aa9.46□□□□□ -0.9
PCDH9-202ENST00000377865 XPO6Q96QU8 1125 aaKnown RBP9.46□□□□□ -0.9
PCDH9-202ENST00000377865 UIMC1Q96RL1 719 aa9.46□□□□□ -0.9
PCDH9-202ENST00000377865 PNMA2Q9UL42 364 aa9.46□□□□□ -0.9
PCDH9-202ENST00000377865 PP2D1A8MPX8 630 aa9.45□□□□□ -0.9
PCDH9-202ENST00000377865 BACH1O14867 736 aa9.45□□□□□ -0.9
PCDH9-202ENST00000377865 OPHN1O60890 802 aa9.45□□□□□ -0.9
PCDH9-202ENST00000377865 VPS41P49754 854 aa9.45□□□□□ -0.9
PCDH9-202ENST00000377865 TOB1P50616 345 aaPredicted RBP9.45□□□□□ -0.9
PCDH9-202ENST00000377865 SMC1BQ8NDV3 1235 aa9.45□□□□□ -0.9
PCDH9-202ENST00000377865 NGLY1Q96IV0 654 aa9.45□□□□□ -0.9
PCDH9-202ENST00000377865 FAM208AQ9UK61 1670 aaKnown RBP9.45□□□□□ -0.9
PCDH9-202ENST00000377865 GRIN1Q05586 938 aa9.45□□□□□ -0.9
PCDH9-202ENST00000377865 DMP1Q13316 513 aaPredicted RBP9.45□□□□□ -0.9
PCDH9-202ENST00000377865 FAM102BQ5T8I3 360 aa9.45□□□□□ -0.9
PCDH9-202ENST00000377865 USP49Q70CQ1 688 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms