RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 APBA1Q02410 837 aa18.81■□□□□ 0.6
TRIM27-201ENST00000377194 ACTN3Q08043 901 aaPredicted RBP18.81■□□□□ 0.6
TRIM27-201ENST00000377194 BTNL9Q6UXG8 535 aa18.81■□□□□ 0.6
TRIM27-201ENST00000377194 TSEN2Q8NCE0 465 aaKnown RBP18.81■□□□□ 0.6
TRIM27-201ENST00000377194 EMILIN3Q9NT22 766 aa18.81■□□□□ 0.6
TRIM27-201ENST00000377194 DMGDHQ9UI17 866 aaKnown RBP18.81■□□□□ 0.6
TRIM27-201ENST00000377194 FRMD3A2A2Y4 597 aa18.8■□□□□ 0.6
TRIM27-201ENST00000377194 MSH4O15457 936 aa18.8■□□□□ 0.6
TRIM27-201ENST00000377194 KIF1CO43896 1103 aaKnown RBP18.8■□□□□ 0.6
TRIM27-201ENST00000377194 IPO7O95373 1038 aaKnown RBP18.8■□□□□ 0.6
TRIM27-201ENST00000377194 EIF4A3P38919 411 aaKnown RBP18.8■□□□□ 0.6
TRIM27-201ENST00000377194 EHBP1Q8NDI1 1231 aa18.8■□□□□ 0.6
TRIM27-201ENST00000377194 PURBQ96QR8 312 aaKnown RBP18.8■□□□□ 0.6
TRIM27-201ENST00000377194 SH3GL2Q99962 352 aa18.8■□□□□ 0.6
TRIM27-201ENST00000377194 LRRC1Q9BTT6 524 aa18.8■□□□□ 0.6
TRIM27-201ENST00000377194 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.8■□□□□ 0.6
TRIM27-201ENST00000377194 VAV2P52735 878 aa18.8■□□□□ 0.6
TRIM27-201ENST00000377194 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.8■□□□□ 0.6
TRIM27-201ENST00000377194 SMARCAL1Q9NZC9 954 aa18.8■□□□□ 0.6
TRIM27-201ENST00000377194 NOL4O94818 638 aa18.79■□□□□ 0.6
TRIM27-201ENST00000377194 RPA1P27694 616 aa18.79■□□□□ 0.6
TRIM27-201ENST00000377194 KIF11P52732 1056 aa18.79■□□□□ 0.6
TRIM27-201ENST00000377194 CYP4A11Q02928 519 aa18.79■□□□□ 0.6
TRIM27-201ENST00000377194 GIT2Q14161 759 aa18.79■□□□□ 0.6
TRIM27-201ENST00000377194 CCDC40Q4G0X9 1142 aa18.79■□□□□ 0.6
TRIM27-201ENST00000377194 CDAN1Q8IWY9 1227 aa18.79■□□□□ 0.6
TRIM27-201ENST00000377194 KRT18P05783 430 aaKnown RBP18.79■□□□□ 0.6
TRIM27-201ENST00000377194 RDXP35241 583 aaKnown RBP18.79■□□□□ 0.6
TRIM27-201ENST00000377194 HAUS3Q68CZ6 603 aa18.79■□□□□ 0.6
TRIM27-201ENST00000377194 N4BP2L2Q92802 583 aaPredicted RBP18.79■□□□□ 0.6
TRIM27-201ENST00000377194 IQCDQ96DY2 449 aa18.79■□□□□ 0.6
TRIM27-201ENST00000377194 PDGFDQ9GZP0 370 aaPredicted RBP18.79■□□□□ 0.6
TRIM27-201ENST00000377194 NLRC4Q9NPP4 1024 aa18.79■□□□□ 0.6
TRIM27-201ENST00000377194 PCDHA13Q9Y5I0 950 aa18.79■□□□□ 0.6
TRIM27-201ENST00000377194 TBX3O15119 743 aa18.78■□□□□ 0.6
TRIM27-201ENST00000377194 MEFVO15553 781 aaPredicted RBP18.78■□□□□ 0.6
TRIM27-201ENST00000377194 RAD17O75943 681 aa18.78■□□□□ 0.6
TRIM27-201ENST00000377194 FOSP01100 380 aaPredicted RBP18.78■□□□□ 0.6
TRIM27-201ENST00000377194 HOXA7P31268 230 aaPredicted RBP18.78■□□□□ 0.6
TRIM27-201ENST00000377194 KIF5AQ12840 1032 aa18.78■□□□□ 0.6
TRIM27-201ENST00000377194 SPA17Q15506 151 aa18.78■□□□□ 0.6
TRIM27-201ENST00000377194 PSMB7Q99436 277 aa18.78■□□□□ 0.6
TRIM27-201ENST00000377194 VAV3Q9UKW4 847 aa18.78■□□□□ 0.6
TRIM27-201ENST00000377194 SPDYE2BA6NHP3 402 aa18.78■□□□□ 0.6
TRIM27-201ENST00000377194 GOLGA8KD6RF30 607 aa18.78■□□□□ 0.6
TRIM27-201ENST00000377194 EML1O00423 815 aa18.78■□□□□ 0.6
TRIM27-201ENST00000377194 SPDYE6P0CI01 402 aa18.78■□□□□ 0.6
TRIM27-201ENST00000377194 CIITAP33076 1130 aa18.78■□□□□ 0.6
TRIM27-201ENST00000377194 GUCY1A3Q02108 690 aa18.78■□□□□ 0.6
TRIM27-201ENST00000377194 CCDC70Q6NSX1 233 aa18.78■□□□□ 0.6
TRIM27-201ENST00000377194 CREG2Q8IUH2 290 aa18.78■□□□□ 0.6
TRIM27-201ENST00000377194 TRIM59Q8IWR1 403 aa18.78■□□□□ 0.6
TRIM27-201ENST00000377194 REEP2Q9BRK0 252 aa18.78■□□□□ 0.6
TRIM27-201ENST00000377194 IFIH1Q9BYX4 1025 aaKnown RBP18.78■□□□□ 0.6
TRIM27-201ENST00000377194 ANO9A1A5B4 782 aa18.77■□□□□ 0.6
TRIM27-201ENST00000377194 HOXD13P35453 343 aa18.77■□□□□ 0.6
TRIM27-201ENST00000377194 ADAM9Q13443 819 aa18.77■□□□□ 0.6
TRIM27-201ENST00000377194 HGSNATQ68CP4 663 aa18.77■□□□□ 0.6
TRIM27-201ENST00000377194 SYT2Q8N9I0 419 aaPredicted RBP18.77■□□□□ 0.6
TRIM27-201ENST00000377194 RUFY1Q96T51 708 aa18.77■□□□□ 0.6
TRIM27-201ENST00000377194 MLXIPQ9HAP2 919 aa18.77■□□□□ 0.6
TRIM27-201ENST00000377194 RGL1Q9NZL6 768 aa18.77■□□□□ 0.6
TRIM27-201ENST00000377194 DNM3Q9UQ16 869 aa18.77■□□□□ 0.6
TRIM27-201ENST00000377194 ZBTB12Q9Y330 459 aaPredicted RBP18.77■□□□□ 0.6
TRIM27-201ENST00000377194 CAPN6Q9Y6Q1 641 aa18.77■□□□□ 0.6
TRIM27-201ENST00000377194 PITPNM2Q9BZ72 1349 aa18.77■□□□□ 0.6
TRIM27-201ENST00000377194 UTRNP46939 3433 aa18.77■□□□□ 0.6
TRIM27-201ENST00000377194 KRT14P02533 472 aa18.77■□□□□ 0.6
TRIM27-201ENST00000377194 ELF1P32519 619 aa18.77■□□□□ 0.6
TRIM27-201ENST00000377194 PPP2R5AQ15172 486 aa18.77■□□□□ 0.6
TRIM27-201ENST00000377194 SLC15A2Q16348 729 aa18.77■□□□□ 0.6
TRIM27-201ENST00000377194 ASTE1Q2TB18 679 aaPredicted RBP18.77■□□□□ 0.6
TRIM27-201ENST00000377194 FAM83BQ5T0W9 1011 aa18.77■□□□□ 0.6
TRIM27-201ENST00000377194 ZNF772Q68DY9 489 aaPredicted RBP18.77■□□□□ 0.6
TRIM27-201ENST00000377194 IQCEQ6IPM2 695 aa18.77■□□□□ 0.6
TRIM27-201ENST00000377194 PDXDC1Q6P996 788 aa18.77■□□□□ 0.6
TRIM27-201ENST00000377194 B4GALNT4Q76KP1 1039 aa18.77■□□□□ 0.6
TRIM27-201ENST00000377194 RPAINQ86UA6 219 aa18.77■□□□□ 0.6
TRIM27-201ENST00000377194 FAM20AQ96MK3 541 aa18.77■□□□□ 0.6
TRIM27-201ENST00000377194 CEP63Q96MT8 703 aa18.77■□□□□ 0.6
TRIM27-201ENST00000377194 RSPH10B2B2RC85 870 aa18.77■□□□□ 0.59
TRIM27-201ENST00000377194 AKR1B10O60218 316 aa18.77■□□□□ 0.59
TRIM27-201ENST00000377194 TLR2O60603 784 aa18.77■□□□□ 0.59
TRIM27-201ENST00000377194 FSBPO95073 299 aa18.77■□□□□ 0.59
TRIM27-201ENST00000377194 LCA5LO95447 670 aa18.77■□□□□ 0.59
TRIM27-201ENST00000377194 RSPH10BP0C881 870 aa18.77■□□□□ 0.59
TRIM27-201ENST00000377194 POLD1P28340 1107 aa18.77■□□□□ 0.59
TRIM27-201ENST00000377194 STAT2P52630 851 aa18.77■□□□□ 0.59
TRIM27-201ENST00000377194 GFPT1Q06210 699 aaPredicted RBP18.77■□□□□ 0.59
TRIM27-201ENST00000377194 CACNA2D4Q7Z3S7 1137 aa18.77■□□□□ 0.59
TRIM27-201ENST00000377194 MMGT1Q8N4V1 131 aa18.77■□□□□ 0.59
TRIM27-201ENST00000377194 EHD2Q9NZN4 543 aa18.77■□□□□ 0.59
TRIM27-201ENST00000377194 SALL4Q9UJQ4 1053 aa18.77■□□□□ 0.59
TRIM27-201ENST00000377194 IGLV3-22A0A075B6J6 115 aa18.76■□□□□ 0.59
TRIM27-201ENST00000377194 SEC24CP53992 1094 aa18.76■□□□□ 0.59
TRIM27-201ENST00000377194 SFR1Q86XK3 245 aa18.76■□□□□ 0.59
TRIM27-201ENST00000377194 BHMT2Q9H2M3 363 aa18.76■□□□□ 0.59
TRIM27-201ENST00000377194 HERC5Q9UII4 1024 aaKnown RBP18.76■□□□□ 0.59
TRIM27-201ENST00000377194 KCNG1Q9UIX4 513 aa18.76■□□□□ 0.59
TRIM27-201ENST00000377194 MCM8Q9UJA3 840 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms