RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 SLC10A4Q96EP9 437 aa14.75□□□□□ -0.05
C9orf47-203ENST00000375851 NLRP4Q96MN2 994 aa14.75□□□□□ -0.05
C9orf47-203ENST00000375851 RNF146Q9NTX7 359 aa14.75□□□□□ -0.05
C9orf47-203ENST00000375851 MTMR4Q9NYA4 1195 aa14.75□□□□□ -0.05
C9orf47-203ENST00000375851 HERC5Q9UII4 1024 aaKnown RBP14.75□□□□□ -0.05
C9orf47-203ENST00000375851 TECPR2O15040 1411 aa14.75□□□□□ -0.05
C9orf47-203ENST00000375851 DNAJC24Q6P3W2 148 aa14.75□□□□□ -0.05
C9orf47-203ENST00000375851 METTL16Q86W50 562 aaKnown RBP14.75□□□□□ -0.05
C9orf47-203ENST00000375851 CACNA2D3Q8IZS8 1091 aa14.75□□□□□ -0.05
C9orf47-203ENST00000375851 GUF1Q8N442 669 aaKnown RBP14.75□□□□□ -0.05
C9orf47-203ENST00000375851 MCPH1Q8NEM0 835 aa14.75□□□□□ -0.05
C9orf47-203ENST00000375851 MSTO1Q9BUK6 570 aa14.75□□□□□ -0.05
C9orf47-203ENST00000375851 DNAJC12Q9UKB3 198 aa14.75□□□□□ -0.05
C9orf47-203ENST00000375851 A6NJR5 290 aa14.75□□□□□ -0.05
C9orf47-203ENST00000375851 KCNH2Q12809 1159 aa14.75□□□□□ -0.05
C9orf47-203ENST00000375851 PPP2R5CQ13362 524 aa14.75□□□□□ -0.05
C9orf47-203ENST00000375851 SNX1Q13596 522 aa14.75□□□□□ -0.05
C9orf47-203ENST00000375851 XXYLT1Q8NBI6 393 aa14.75□□□□□ -0.05
C9orf47-203ENST00000375851 ARHGEF2Q92974 986 aaKnown RBP14.75□□□□□ -0.05
C9orf47-203ENST00000375851 KAZALD1Q96I82 304 aa14.75□□□□□ -0.05
C9orf47-203ENST00000375851 FAM193BQ96PV7 902 aaPredicted RBP14.75□□□□□ -0.05
C9orf47-203ENST00000375851 PHLDB2Q86SQ0 1253 aa14.75□□□□□ -0.05
C9orf47-203ENST00000375851 C7orf31Q8N865 590 aa14.75□□□□□ -0.05
C9orf47-203ENST00000375851 NLRP7Q8WX94 980 aa14.75□□□□□ -0.05
C9orf47-203ENST00000375851 HSPA6P17066 643 aa14.74□□□□□ -0.05
C9orf47-203ENST00000375851 CHRNA5P30532 468 aa14.74□□□□□ -0.05
C9orf47-203ENST00000375851 USP11P51784 963 aa14.74□□□□□ -0.05
C9orf47-203ENST00000375851 SLFN12LQ6IEE8 588 aa14.74□□□□□ -0.05
C9orf47-203ENST00000375851 PPP1R2P3Q6NXS1 205 aa14.74□□□□□ -0.05
C9orf47-203ENST00000375851 NSUN6Q8TEA1 469 aaKnown RBP14.74□□□□□ -0.05
C9orf47-203ENST00000375851 ATP8A1Q9Y2Q0 1164 aa14.74□□□□□ -0.05
C9orf47-203ENST00000375851 ADGRB1O14514 1584 aa14.74□□□□□ -0.05
C9orf47-203ENST00000375851 ABCB11O95342 1321 aa14.74□□□□□ -0.05
C9orf47-203ENST00000375851 FLT1P17948 1338 aa14.74□□□□□ -0.05
C9orf47-203ENST00000375851 STAT3P40763 770 aa14.74□□□□□ -0.05
C9orf47-203ENST00000375851 KRT76Q01546 638 aa14.74□□□□□ -0.05
C9orf47-203ENST00000375851 STXBP2Q15833 593 aa14.74□□□□□ -0.05
C9orf47-203ENST00000375851 DHX40Q8IX18 779 aaKnown RBP14.74□□□□□ -0.05
C9orf47-203ENST00000375851 HAUS2Q9NVX0 235 aa14.74□□□□□ -0.05
C9orf47-203ENST00000375851 CEP72Q9P209 647 aa14.74□□□□□ -0.05
C9orf47-203ENST00000375851 FBXO40Q9UH90 709 aa14.74□□□□□ -0.05
C9orf47-203ENST00000375851 A0A0G2JLW4 131 aa14.74□□□□□ -0.05
C9orf47-203ENST00000375851 IPO5O00410 1097 aaKnown RBP14.74□□□□□ -0.05
C9orf47-203ENST00000375851 TROVE2P10155 538 aaKnown RBP eCLIP14.74□□□□□ -0.05
C9orf47-203ENST00000375851 MKRN3Q13064 507 aaKnown RBP14.74□□□□□ -0.05
C9orf47-203ENST00000375851 KNOP1Q1ED39 458 aaKnown RBP14.74□□□□□ -0.05
C9orf47-203ENST00000375851 RINT1Q6NUQ1 792 aa14.74□□□□□ -0.05
C9orf47-203ENST00000375851 FBXO33Q7Z6M2 555 aa14.74□□□□□ -0.05
C9orf47-203ENST00000375851 PPP1R16BQ96T49 567 aa14.74□□□□□ -0.05
C9orf47-203ENST00000375851 PHF20Q9BVI0 1012 aa14.74□□□□□ -0.05
C9orf47-203ENST00000375851 MAD1L1Q9Y6D9 718 aa14.74□□□□□ -0.05
C9orf47-203ENST00000375851 LRRC53A6NM62 1247 aa14.73□□□□□ -0.05
C9orf47-203ENST00000375851 SGK1O00141 431 aa14.73□□□□□ -0.05
C9orf47-203ENST00000375851 CLCN6P51797 869 aa14.73□□□□□ -0.05
C9orf47-203ENST00000375851 RSPH3Q86UC2 560 aa14.73□□□□□ -0.05
C9orf47-203ENST00000375851 RFX6Q8HWS3 928 aa14.73□□□□□ -0.05
C9orf47-203ENST00000375851 AFAP1L2Q8N4X5 818 aa14.73□□□□□ -0.05
C9orf47-203ENST00000375851 RILPQ96NA2 401 aa14.73□□□□□ -0.05
C9orf47-203ENST00000375851 SENP2Q9HC62 589 aa14.73□□□□□ -0.05
C9orf47-203ENST00000375851 SEPT10Q9P0V9 454 aa14.73□□□□□ -0.05
C9orf47-203ENST00000375851 KLHL14Q9P2G3 628 aa14.73□□□□□ -0.05
C9orf47-203ENST00000375851 THNSL1Q8IYQ7 743 aa14.73□□□□□ -0.05
C9orf47-203ENST00000375851 TTC26A0AVF1 554 aa14.73□□□□□ -0.05
C9orf47-203ENST00000375851 BUB1BO60566 1050 aaPredicted RBP14.73□□□□□ -0.05
C9orf47-203ENST00000375851 ECEL1O95672 775 aa14.73□□□□□ -0.05
C9orf47-203ENST00000375851 FDPSP14324 419 aaKnown RBP14.73□□□□□ -0.05
C9orf47-203ENST00000375851 GCLMP48507 274 aa14.73□□□□□ -0.05
C9orf47-203ENST00000375851 YWHAGP61981 247 aaKnown RBP eCLIP14.73□□□□□ -0.05
C9orf47-203ENST00000375851 SURF1Q15526 300 aa14.73□□□□□ -0.05
C9orf47-203ENST00000375851 PLCD3Q8N3E9 789 aa14.73□□□□□ -0.05
C9orf47-203ENST00000375851 P4HBP07237 508 aaKnown RBP14.73□□□□□ -0.05
C9orf47-203ENST00000375851 QARSP47897 775 aaKnown RBP14.73□□□□□ -0.05
C9orf47-203ENST00000375851 ZNF543Q08ER8 600 aa14.73□□□□□ -0.05
C9orf47-203ENST00000375851 CCSER1Q9C0I3 900 aa14.73□□□□□ -0.05
C9orf47-203ENST00000375851 CCDC160A6NGH7 325 aa14.72□□□□□ -0.05
C9orf47-203ENST00000375851 POC1B-GALNT4F8VUJ3 575 aa14.72□□□□□ -0.05
C9orf47-203ENST00000375851 CLEC10AQ8IUN9 316 aa14.72□□□□□ -0.05
C9orf47-203ENST00000375851 NEK9Q8TD19 979 aa14.72□□□□□ -0.05
C9orf47-203ENST00000375851 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.72□□□□□ -0.05
C9orf47-203ENST00000375851 ZC3H13Q5T200 1668 aaKnown RBP14.72□□□□□ -0.05
C9orf47-203ENST00000375851 GMNNO75496 209 aa14.72□□□□□ -0.05
C9orf47-203ENST00000375851 DHX9Q08211 1270 aaKnown RBP14.72□□□□□ -0.05
C9orf47-203ENST00000375851 STRIP1Q5VSL9 837 aa14.72□□□□□ -0.05
C9orf47-203ENST00000375851 SNX25Q9H3E2 840 aa14.72□□□□□ -0.05
C9orf47-203ENST00000375851 SLC16A4O15374 487 aa14.72□□□□□ -0.05
C9orf47-203ENST00000375851 FCER1AP12319 257 aa14.72□□□□□ -0.05
C9orf47-203ENST00000375851 RHOT2Q8IXI1 618 aa14.72□□□□□ -0.05
C9orf47-203ENST00000375851 ARHGAP24Q8N264 748 aa14.72□□□□□ -0.05
C9orf47-203ENST00000375851 RPF1Q9H9Y2 349 aaKnown RBP14.72□□□□□ -0.05
C9orf47-203ENST00000375851 IFT122Q9HBG6 1241 aa14.72□□□□□ -0.05
C9orf47-203ENST00000375851 FRMPD1Q5SYB0 1578 aa14.72□□□□□ -0.05
C9orf47-203ENST00000375851 MED7O43513 233 aa14.72□□□□□ -0.05
C9orf47-203ENST00000375851 LDHAP00338 332 aaKnown RBP14.72□□□□□ -0.05
C9orf47-203ENST00000375851 KRT1P04264 644 aa14.72□□□□□ -0.05
C9orf47-203ENST00000375851 AP1M1Q9BXS5 423 aa14.72□□□□□ -0.05
C9orf47-203ENST00000375851 CALN1Q9BXU9 219 aa14.72□□□□□ -0.05
C9orf47-203ENST00000375851 ATP6V0A4Q9HBG4 840 aa14.72□□□□□ -0.05
C9orf47-203ENST00000375851 KIAA1210Q9ULL0 1709 aa14.72□□□□□ -0.05
C9orf47-203ENST00000375851 SLC7A5Q01650 507 aa14.71□□□□□ -0.05
C9orf47-203ENST00000375851 EN1Q05925 392 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms