RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 CLDND1Q9NY35 253 aa26.47■■□□□ 1.83
C9orf47-202ENST00000375850 BARHL2Q9NY43 387 aa26.47■■□□□ 1.83
C9orf47-202ENST00000375850 PRR33A8MZF0 331 aa26.46■■□□□ 1.83
C9orf47-202ENST00000375850 RBAK-RBAKDNI3L0D1 243 aa26.46■■□□□ 1.83
C9orf47-202ENST00000375850 MEIS1O00470 390 aa26.46■■□□□ 1.83
C9orf47-202ENST00000375850 MMP1P03956 469 aa26.46■■□□□ 1.83
C9orf47-202ENST00000375850 CD52P31358 61 aa26.46■■□□□ 1.83
C9orf47-202ENST00000375850 EXOSC10Q01780 885 aaKnown RBP26.46■■□□□ 1.83
C9orf47-202ENST00000375850 PAK2Q13177 524 aa26.46■■□□□ 1.83
C9orf47-202ENST00000375850 CTC1Q2NKJ3 1217 aa26.46■■□□□ 1.83
C9orf47-202ENST00000375850 MCTP2Q6DN12 878 aa26.46■■□□□ 1.83
C9orf47-202ENST00000375850 EP400NLQ6ZTU2 488 aa26.46■■□□□ 1.83
C9orf47-202ENST00000375850 CELF4Q9BZC1 486 aaKnown RBP26.46■■□□□ 1.83
C9orf47-202ENST00000375850 POTEB3A0JP26 581 aa26.45■■□□□ 1.82
C9orf47-202ENST00000375850 GRM6O15303 877 aa26.45■■□□□ 1.82
C9orf47-202ENST00000375850 HMGB1P09429 215 aaKnown RBP26.45■■□□□ 1.82
C9orf47-202ENST00000375850 FUT2Q10981 343 aa26.45■■□□□ 1.82
C9orf47-202ENST00000375850 ODR4Q5SWX8 454 aa26.45■■□□□ 1.82
C9orf47-202ENST00000375850 FAM160B1Q5W0V3 765 aa26.45■■□□□ 1.82
C9orf47-202ENST00000375850 POTEBQ6S5H4 581 aa26.45■■□□□ 1.82
C9orf47-202ENST00000375850 PADI3Q9ULW8 664 aa26.45■■□□□ 1.82
C9orf47-202ENST00000375850 V9GY48 417 aaPredicted RBP26.45■■□□□ 1.82
C9orf47-202ENST00000375850 SMCO2A6NFE2 343 aa26.44■■□□□ 1.82
C9orf47-202ENST00000375850 STXBP3O00186 592 aa26.44■■□□□ 1.82
C9orf47-202ENST00000375850 HBP1O60381 514 aa26.44■■□□□ 1.82
C9orf47-202ENST00000375850 ARP10275 920 aa26.44■■□□□ 1.82
C9orf47-202ENST00000375850 ZNF76P36508 570 aa26.44■■□□□ 1.82
C9orf47-202ENST00000375850 TYW1BQ6NUM6 668 aa26.44■■□□□ 1.82
C9orf47-202ENST00000375850 CRIPAKQ8N1N5 446 aa26.44■■□□□ 1.82
C9orf47-202ENST00000375850 CYP2W1Q8TAV3 490 aa26.44■■□□□ 1.82
C9orf47-202ENST00000375850 POP1Q99575 1024 aaKnown RBP26.44■■□□□ 1.82
C9orf47-202ENST00000375850 UPF3BQ9BZI7 483 aaKnown RBP26.44■■□□□ 1.82
C9orf47-202ENST00000375850 TTC3P53804 2025 aa26.43■■□□□ 1.82
C9orf47-202ENST00000375850 NLRC5Q86WI3 1866 aa26.43■■□□□ 1.82
C9orf47-202ENST00000375850 IGKV6D-21A0A0A0MT36 114 aa26.43■■□□□ 1.82
C9orf47-202ENST00000375850 CCDC196A0A1B0GTZ2 297 aa26.43■■□□□ 1.82
C9orf47-202ENST00000375850 CLK2P49760 499 aaKnown RBP26.43■■□□□ 1.82
C9orf47-202ENST00000375850 KRT76Q01546 638 aa26.43■■□□□ 1.82
C9orf47-202ENST00000375850 ITGB3BPQ13352 177 aaPredicted RBP26.43■■□□□ 1.82
C9orf47-202ENST00000375850 MTHFD1LQ6UB35 978 aa26.43■■□□□ 1.82
C9orf47-202ENST00000375850 ADHFE1Q8IWW8 467 aa26.43■■□□□ 1.82
C9orf47-202ENST00000375850 LINC01599Q8WXQ3 324 aa26.43■■□□□ 1.82
C9orf47-202ENST00000375850 COL1A2P08123 1366 aa26.43■■□□□ 1.82
C9orf47-202ENST00000375850 GOLGA8AA7E2F4 631 aa26.42■■□□□ 1.82
C9orf47-202ENST00000375850 GOLGA8BA8MQT2 603 aa26.42■■□□□ 1.82
C9orf47-202ENST00000375850 SCG2P13521 617 aa26.42■■□□□ 1.82
C9orf47-202ENST00000375850 ZP2Q05996 745 aa26.42■■□□□ 1.82
C9orf47-202ENST00000375850 RTN4RL1Q86UN2 441 aaPredicted RBP26.42■■□□□ 1.82
C9orf47-202ENST00000375850 ATP8B4Q8TF62 1192 aa26.42■■□□□ 1.82
C9orf47-202ENST00000375850 PLAGL2Q9UPG8 496 aa26.42■■□□□ 1.82
C9orf47-202ENST00000375850 C19orf67A6NJJ6 358 aa26.41■■□□□ 1.82
C9orf47-202ENST00000375850 BACH1O14867 736 aa26.41■■□□□ 1.82
C9orf47-202ENST00000375850 DCXO43602 365 aa26.41■■□□□ 1.82
C9orf47-202ENST00000375850 LTBRP36941 435 aa26.41■■□□□ 1.82
C9orf47-202ENST00000375850 HYAL1Q12794 435 aa26.41■■□□□ 1.82
C9orf47-202ENST00000375850 MIS18BP1Q6P0N0 1132 aa26.41■■□□□ 1.82
C9orf47-202ENST00000375850 ABHD15Q6UXT9 468 aa26.41■■□□□ 1.82
C9orf47-202ENST00000375850 CCDC12Q8WUD4 166 aaPredicted RBP26.41■■□□□ 1.82
C9orf47-202ENST00000375850 BRPF3Q9ULD4 1205 aa26.41■■□□□ 1.82
C9orf47-202ENST00000375850 LRFN2Q9ULH4 789 aa26.41■■□□□ 1.82
C9orf47-202ENST00000375850 MRPL42Q9Y6G3 142 aaKnown RBP26.41■■□□□ 1.82
C9orf47-202ENST00000375850 FAM86C2PA6NEL3 165 aa26.4■■□□□ 1.82
C9orf47-202ENST00000375850 SMAD2Q15796 467 aaKnown RBP26.4■■□□□ 1.82
C9orf47-202ENST00000375850 ZNF484Q5JVG2 852 aa26.4■■□□□ 1.82
C9orf47-202ENST00000375850 TRAPPC12Q8WVT3 735 aa26.4■■□□□ 1.82
C9orf47-202ENST00000375850 ZBTB10Q96DT7 871 aa26.4■■□□□ 1.82
C9orf47-202ENST00000375850 PGBD1Q96JS3 809 aa26.4■■□□□ 1.82
C9orf47-202ENST00000375850 KLF18A0A0U1RQI7 1052 aa26.39■■□□□ 1.82
C9orf47-202ENST00000375850 ESYT2A0FGR8 921 aa26.39■■□□□ 1.82
C9orf47-202ENST00000375850 CYP3A4P08684 503 aa26.39■■□□□ 1.82
C9orf47-202ENST00000375850 KLRC1P26715 233 aa26.39■■□□□ 1.82
C9orf47-202ENST00000375850 SARSP49591 514 aaKnown RBP26.39■■□□□ 1.82
C9orf47-202ENST00000375850 SETQ01105 290 aaPredicted RBP26.39■■□□□ 1.82
C9orf47-202ENST00000375850 TMEM62Q0P6H9 643 aa26.39■■□□□ 1.82
C9orf47-202ENST00000375850 SMAD4Q13485 552 aaKnown RBP26.39■■□□□ 1.82
C9orf47-202ENST00000375850 CSPP1Q1MSJ5 1256 aa26.39■■□□□ 1.82
C9orf47-202ENST00000375850 ZNF302Q9NR11 478 aa26.39■■□□□ 1.82
C9orf47-202ENST00000375850 C1orf112Q9NSG2 853 aa26.39■■□□□ 1.82
C9orf47-202ENST00000375850 TBC1D22BQ9NU19 505 aa26.39■■□□□ 1.82
C9orf47-202ENST00000375850 CCNE2O96020 404 aa26.38■■□□□ 1.81
C9orf47-202ENST00000375850 HOXD11P31277 338 aaPredicted RBP26.38■■□□□ 1.81
C9orf47-202ENST00000375850 FGD1P98174 961 aa26.38■■□□□ 1.81
C9orf47-202ENST00000375850 PFKFB3Q16875 520 aaPredicted RBP26.38■■□□□ 1.81
C9orf47-202ENST00000375850 PDXDC2PQ6P474 469 aa26.38■■□□□ 1.81
C9orf47-202ENST00000375850 PLA2G4DQ86XP0 818 aa26.38■■□□□ 1.81
C9orf47-202ENST00000375850 ALG13Q9NP73 1137 aaKnown RBP26.38■■□□□ 1.81
C9orf47-202ENST00000375850 TCEAL9Q9UHQ7 104 aa26.38■■□□□ 1.81
C9orf47-202ENST00000375850 FSD2A1L4K1 749 aa26.37■■□□□ 1.81
C9orf47-202ENST00000375850 IPO5O00410 1097 aaKnown RBP26.37■■□□□ 1.81
C9orf47-202ENST00000375850 GPR182O15218 404 aa26.37■■□□□ 1.81
C9orf47-202ENST00000375850 RPS6KA5O75582 802 aa26.37■■□□□ 1.81
C9orf47-202ENST00000375850 CENPQQ7L2Z9 268 aaPredicted RBP26.37■■□□□ 1.81
C9orf47-202ENST00000375850 SMAP1Q8IYB5 467 aaPredicted RBP26.37■■□□□ 1.81
C9orf47-202ENST00000375850 SPPL3Q8TCT6 385 aa26.37■■□□□ 1.81
C9orf47-202ENST00000375850 CRYGNQ8WXF5 182 aa26.37■■□□□ 1.81
C9orf47-202ENST00000375850 AAASQ9NRG9 546 aa26.37■■□□□ 1.81
C9orf47-202ENST00000375850 TMEM260Q9NX78 707 aa26.37■■□□□ 1.81
C9orf47-202ENST00000375850 PCDHB7Q9Y5E2 793 aa26.37■■□□□ 1.81
C9orf47-202ENST00000375850 MBTPS2O43462 519 aa26.36■■□□□ 1.81
C9orf47-202ENST00000375850 CDC45O75419 566 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms