RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 A0A1B0GUA9 196 aa14.14□□□□□ -0.15
MSH5-204ENST00000375755 CCDC194A0A1B0GVG4 234 aa14.14□□□□□ -0.15
MSH5-204ENST00000375755 H0YGN5 161 aa14.14□□□□□ -0.15
MSH5-204ENST00000375755 CCNE1P24864 410 aa14.14□□□□□ -0.15
MSH5-204ENST00000375755 SLC1A4P43007 532 aa14.14□□□□□ -0.15
MSH5-204ENST00000375755 GFPT1Q06210 699 aaPredicted RBP14.14□□□□□ -0.15
MSH5-204ENST00000375755 ACCSLQ4AC99 568 aa14.14□□□□□ -0.15
MSH5-204ENST00000375755 LACTB2Q53H82 288 aaPredicted RBP14.14□□□□□ -0.15
MSH5-204ENST00000375755 ADGRF4Q8IZF3 695 aa14.14□□□□□ -0.15
MSH5-204ENST00000375755 RASSF8Q8NHQ8 419 aa14.14□□□□□ -0.15
MSH5-204ENST00000375755 UIMC1Q96RL1 719 aa14.14□□□□□ -0.15
MSH5-204ENST00000375755 SH3GLB2Q9NR46 395 aa14.14□□□□□ -0.15
MSH5-204ENST00000375755 CNOT8Q9UFF9 292 aaKnown RBP14.14□□□□□ -0.15
MSH5-204ENST00000375755 SIK3Q9Y2K2 1263 aa14.14□□□□□ -0.15
MSH5-204ENST00000375755 NFS1Q9Y697 457 aa14.14□□□□□ -0.15
MSH5-204ENST00000375755 GOLGA6L10A6NI86 522 aa14.14□□□□□ -0.15
MSH5-204ENST00000375755 USP17L10C9JJH3 530 aa14.14□□□□□ -0.15
MSH5-204ENST00000375755 GCOM1H8Y6P7 765 aaPredicted RBP14.14□□□□□ -0.15
MSH5-204ENST00000375755 RAD51CO43502 376 aa14.14□□□□□ -0.15
MSH5-204ENST00000375755 MGRN1O60291 552 aa14.14□□□□□ -0.15
MSH5-204ENST00000375755 MYZAPP0CAP1 466 aa14.14□□□□□ -0.15
MSH5-204ENST00000375755 EEF2P13639 858 aaKnown RBP14.14□□□□□ -0.15
MSH5-204ENST00000375755 CALML3P27482 149 aa14.14□□□□□ -0.15
MSH5-204ENST00000375755 HSD17B3P37058 310 aa14.14□□□□□ -0.15
MSH5-204ENST00000375755 UAP1Q16222 522 aaPredicted RBP14.14□□□□□ -0.15
MSH5-204ENST00000375755 LARGE2Q8N3Y3 721 aa14.14□□□□□ -0.15
MSH5-204ENST00000375755 C3orf20Q8ND61 904 aa14.14□□□□□ -0.15
MSH5-204ENST00000375755 JMJD4Q9H9V9 463 aa14.14□□□□□ -0.15
MSH5-204ENST00000375755 GREB1LQ9C091 1923 aaPredicted RBP14.14□□□□□ -0.15
MSH5-204ENST00000375755 C5orf60A6NFR6 353 aa14.13□□□□□ -0.15
MSH5-204ENST00000375755 LRRC53A6NM62 1247 aa14.13□□□□□ -0.15
MSH5-204ENST00000375755 FTCDO95954 541 aa14.13□□□□□ -0.15
MSH5-204ENST00000375755 ERCC3P19447 782 aa14.13□□□□□ -0.15
MSH5-204ENST00000375755 SLC8A1P32418 973 aa14.13□□□□□ -0.15
MSH5-204ENST00000375755 TRAPPC10P48553 1259 aa14.13□□□□□ -0.15
MSH5-204ENST00000375755 NAA25Q14CX7 972 aa14.13□□□□□ -0.15
MSH5-204ENST00000375755 CERKLQ49MI3 558 aaPredicted RBP14.13□□□□□ -0.15
MSH5-204ENST00000375755 RRAGAQ7L523 313 aa14.13□□□□□ -0.15
MSH5-204ENST00000375755 FMNL3Q8IVF7 1028 aa14.13□□□□□ -0.15
MSH5-204ENST00000375755 CACNA2D3Q8IZS8 1091 aa14.13□□□□□ -0.15
MSH5-204ENST00000375755 RAPGEF5Q92565 580 aa14.13□□□□□ -0.15
MSH5-204ENST00000375755 ZMYND12Q9H0C1 365 aa14.13□□□□□ -0.15
MSH5-204ENST00000375755 RIOX1Q9H6W3 641 aa14.13□□□□□ -0.15
MSH5-204ENST00000375755 SWAP70Q9UH65 585 aa14.13□□□□□ -0.15
MSH5-204ENST00000375755 SERPINA10Q9UK55 444 aa14.13□□□□□ -0.15
MSH5-204ENST00000375755 SKAP2O75563 359 aaPredicted RBP14.13□□□□□ -0.15
MSH5-204ENST00000375755 SNHG28P0DPA3 235 aa14.13□□□□□ -0.15
MSH5-204ENST00000375755 LETM2Q2VYF4 491 aa14.13□□□□□ -0.15
MSH5-204ENST00000375755 ARL6IP4Q66PJ3 421 aaKnown RBP14.13□□□□□ -0.15
MSH5-204ENST00000375755 SAMD1Q6SPF0 538 aaPredicted RBP14.13□□□□□ -0.15
MSH5-204ENST00000375755 LRIG3Q6UXM1 1119 aa14.13□□□□□ -0.15
MSH5-204ENST00000375755 IDI2Q9BXS1 227 aa14.13□□□□□ -0.15
MSH5-204ENST00000375755 RNF14Q9UBS8 474 aa14.13□□□□□ -0.15
MSH5-204ENST00000375755 SEC63Q9UGP8 760 aaKnown RBP14.13□□□□□ -0.15
MSH5-204ENST00000375755 GBP2P32456 591 aaPredicted RBP14.13□□□□□ -0.15
MSH5-204ENST00000375755 ZNF844Q08AG5 666 aa14.13□□□□□ -0.15
MSH5-204ENST00000375755 ZNF543Q08ER8 600 aa14.13□□□□□ -0.15
MSH5-204ENST00000375755 STK4Q13043 487 aa14.13□□□□□ -0.15
MSH5-204ENST00000375755 UBE2SQ16763 222 aa14.13□□□□□ -0.15
MSH5-204ENST00000375755 FAM114A1Q8IWE2 563 aa14.13□□□□□ -0.15
MSH5-204ENST00000375755 CCT6BQ92526 530 aa14.13□□□□□ -0.15
MSH5-204ENST00000375755 HVCN1Q96D96 273 aa14.13□□□□□ -0.15
MSH5-204ENST00000375755 MMRN2Q9H8L6 949 aa14.13□□□□□ -0.15
MSH5-204ENST00000375755 KBTBD4Q9NVX7 518 aa14.13□□□□□ -0.15
MSH5-204ENST00000375755 BCCIPQ9P287 314 aaKnown RBP eCLIP14.13□□□□□ -0.15
MSH5-204ENST00000375755 PACSIN2Q9UNF0 486 aaPredicted RBP14.13□□□□□ -0.15
MSH5-204ENST00000375755 SMCHD1A6NHR9 2005 aa14.12□□□□□ -0.15
MSH5-204ENST00000375755 EDIL3O43854 480 aa14.12□□□□□ -0.15
MSH5-204ENST00000375755 PALMO75781 387 aa14.12□□□□□ -0.15
MSH5-204ENST00000375755 ECHS1P30084 290 aa14.12□□□□□ -0.15
MSH5-204ENST00000375755 ERVK-9P63128 1117 aa14.12□□□□□ -0.15
MSH5-204ENST00000375755 ELF3P78545 371 aaPredicted RBP14.12□□□□□ -0.15
MSH5-204ENST00000375755 HLTFQ14527 1009 aaKnown RBP eCLIP14.12□□□□□ -0.15
MSH5-204ENST00000375755 ASTE1Q2TB18 679 aaPredicted RBP14.12□□□□□ -0.15
MSH5-204ENST00000375755 FAM43BQ6ZT52 329 aaPredicted RBP14.12□□□□□ -0.15
MSH5-204ENST00000375755 KLHL7Q8IXQ5 586 aa14.12□□□□□ -0.15
MSH5-204ENST00000375755 TATDN2Q93075 761 aa14.12□□□□□ -0.15
MSH5-204ENST00000375755 GJA10Q969M2 543 aa14.12□□□□□ -0.15
MSH5-204ENST00000375755 PI4KBQ9UBF8 816 aa14.12□□□□□ -0.15
MSH5-204ENST00000375755 TSKSQ9UJT2 592 aa14.12□□□□□ -0.15
MSH5-204ENST00000375755 PHF20L1A8MW92 1017 aa14.12□□□□□ -0.15
MSH5-204ENST00000375755 CCNT1O60563 726 aaKnown RBP14.12□□□□□ -0.15
MSH5-204ENST00000375755 MYBP10242 640 aa14.12□□□□□ -0.15
MSH5-204ENST00000375755 FCER1AP12319 257 aa14.12□□□□□ -0.15
MSH5-204ENST00000375755 IFFO1Q0D2I5 559 aa14.12□□□□□ -0.15
MSH5-204ENST00000375755 TBC1D31Q96DN5 1066 aa14.12□□□□□ -0.15
MSH5-204ENST00000375755 INPP4AQ96PE3 977 aaPredicted RBP14.12□□□□□ -0.15
MSH5-204ENST00000375755 LZTS2Q9BRK4 669 aa14.12□□□□□ -0.15
MSH5-204ENST00000375755 TAF1DQ9H5J8 278 aaPredicted RBP14.12□□□□□ -0.15
MSH5-204ENST00000375755 BICDL2A1A5D9 508 aa14.11□□□□□ -0.15
MSH5-204ENST00000375755 DCDC2CA8MYV0 355 aa14.11□□□□□ -0.15
MSH5-204ENST00000375755 DNAJC8O75937 253 aaPredicted RBP14.11□□□□□ -0.15
MSH5-204ENST00000375755 ATP6V1G2O95670 118 aa14.11□□□□□ -0.15
MSH5-204ENST00000375755 CCNHP51946 323 aaPredicted RBP14.11□□□□□ -0.15
MSH5-204ENST00000375755 RNF10Q8N5U6 811 aaKnown RBP14.11□□□□□ -0.15
MSH5-204ENST00000375755 RNF217Q8TC41 542 aa14.11□□□□□ -0.15
MSH5-204ENST00000375755 BAP1Q92560 729 aa14.11□□□□□ -0.15
MSH5-204ENST00000375755 NOD2Q9HC29 1040 aa14.11□□□□□ -0.15
MSH5-204ENST00000375755 FKBP1AP62942 108 aaKnown RBP14.11□□□□□ -0.15
MSH5-204ENST00000375755 PPP2R2AP63151 447 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms