RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 KLHL7Q8IXQ5 586 aa15.94■□□□□ 0.14
MSH5-201ENST00000375703 CRYGNQ8WXF5 182 aa15.94■□□□□ 0.14
MSH5-201ENST00000375703 LY75O60449 1722 aa15.93■□□□□ 0.14
MSH5-201ENST00000375703 SKOR1P84550 965 aa15.93■□□□□ 0.14
MSH5-201ENST00000375703 DCAF17Q5H9S7 520 aaPredicted RBP15.93■□□□□ 0.14
MSH5-201ENST00000375703 KCTD16Q68DU8 428 aa15.93■□□□□ 0.14
MSH5-201ENST00000375703 ALKBH5Q6P6C2 394 aaKnown RBP15.93■□□□□ 0.14
MSH5-201ENST00000375703 AMNQ9BXJ7 453 aa15.93■□□□□ 0.14
MSH5-201ENST00000375703 RABEP2Q9H5N1 569 aa15.93■□□□□ 0.14
MSH5-201ENST00000375703 NAGPAQ9UK23 515 aa15.93■□□□□ 0.14
MSH5-201ENST00000375703 SPDYE3A6NKU9 549 aa15.93■□□□□ 0.14
MSH5-201ENST00000375703 A6NNZ2 444 aa15.93■□□□□ 0.14
MSH5-201ENST00000375703 EBAG9O00559 213 aa15.93■□□□□ 0.14
MSH5-201ENST00000375703 CES2O00748 559 aa15.93■□□□□ 0.14
MSH5-201ENST00000375703 RAD51CO43502 376 aa15.93■□□□□ 0.14
MSH5-201ENST00000375703 AKAP3O75969 853 aa15.93■□□□□ 0.14
MSH5-201ENST00000375703 TRADDQ15628 312 aa15.93■□□□□ 0.14
MSH5-201ENST00000375703 TUBB8Q3ZCM7 444 aa15.93■□□□□ 0.14
MSH5-201ENST00000375703 MCTP2Q6DN12 878 aa15.93■□□□□ 0.14
MSH5-201ENST00000375703 PBKQ96KB5 322 aa15.93■□□□□ 0.14
MSH5-201ENST00000375703 POLD4Q9HCU8 107 aa15.93■□□□□ 0.14
MSH5-201ENST00000375703 TMEM59LQ9UK28 342 aa15.93■□□□□ 0.14
MSH5-201ENST00000375703 KIF4AO95239 1232 aa15.92■□□□□ 0.14
MSH5-201ENST00000375703 RPL13P26373 211 aaKnown RBP15.92■□□□□ 0.14
MSH5-201ENST00000375703 CRKP46108 304 aa15.92■□□□□ 0.14
MSH5-201ENST00000375703 CACNB3P54284 484 aa15.92■□□□□ 0.14
MSH5-201ENST00000375703 USH1GQ495M9 461 aa15.92■□□□□ 0.14
MSH5-201ENST00000375703 DNAAF5Q86Y56 855 aa15.92■□□□□ 0.14
MSH5-201ENST00000375703 MREGQ8N565 214 aa15.92■□□□□ 0.14
MSH5-201ENST00000375703 SH2D3CQ8N5H7 860 aa15.92■□□□□ 0.14
MSH5-201ENST00000375703 WHAMMQ8TF30 809 aa15.92■□□□□ 0.14
MSH5-201ENST00000375703 FAM20AQ96MK3 541 aa15.92■□□□□ 0.14
MSH5-201ENST00000375703 METTL14Q9HCE5 456 aaKnown RBP15.92■□□□□ 0.14
MSH5-201ENST00000375703 STK24Q9Y6E0 443 aa15.92■□□□□ 0.14
MSH5-201ENST00000375703 GRIN2DO15399 1336 aa15.92■□□□□ 0.14
MSH5-201ENST00000375703 LTBP4Q8N2S1 1624 aa15.92■□□□□ 0.14
MSH5-201ENST00000375703 SHTN1A0MZ66 631 aa15.92■□□□□ 0.14
MSH5-201ENST00000375703 ZNF233A6NK53 670 aa15.92■□□□□ 0.14
MSH5-201ENST00000375703 FAM86B1E9PN63 330 aa15.92■□□□□ 0.14
MSH5-201ENST00000375703 CLSTN1O94985 981 aa15.92■□□□□ 0.14
MSH5-201ENST00000375703 FAM86B2P0C5J1 330 aa15.92■□□□□ 0.14
MSH5-201ENST00000375703 SF3B2Q13435 895 aaKnown RBP15.92■□□□□ 0.14
MSH5-201ENST00000375703 FBXO11Q86XK2 927 aa15.92■□□□□ 0.14
MSH5-201ENST00000375703 RBM46Q8TBY0 533 aaKnown RBP15.92■□□□□ 0.14
MSH5-201ENST00000375703 LENG9Q96B70 501 aa15.92■□□□□ 0.14
MSH5-201ENST00000375703 GOLPH3Q9H4A6 298 aa15.92■□□□□ 0.14
MSH5-201ENST00000375703 TYW1Q9NV66 732 aaKnown RBP15.92■□□□□ 0.14
MSH5-201ENST00000375703 RSPH10B2B2RC85 870 aa15.91■□□□□ 0.14
MSH5-201ENST00000375703 CEP104O60308 925 aa15.91■□□□□ 0.14
MSH5-201ENST00000375703 FLOT1O75955 427 aa15.91■□□□□ 0.14
MSH5-201ENST00000375703 FOSP01100 380 aaPredicted RBP15.91■□□□□ 0.14
MSH5-201ENST00000375703 NR3C1P04150 777 aa15.91■□□□□ 0.14
MSH5-201ENST00000375703 RSPH10BP0C881 870 aa15.91■□□□□ 0.14
MSH5-201ENST00000375703 CYP4A11Q02928 519 aa15.91■□□□□ 0.14
MSH5-201ENST00000375703 IKQ13123 557 aaPredicted RBP15.91■□□□□ 0.14
MSH5-201ENST00000375703 EPHA7Q15375 998 aa15.91■□□□□ 0.14
MSH5-201ENST00000375703 SIAH1Q8IUQ4 282 aa15.91■□□□□ 0.14
MSH5-201ENST00000375703 PIK3R5Q8WYR1 880 aa15.91■□□□□ 0.14
MSH5-201ENST00000375703 BHMT2Q9H2M3 363 aa15.91■□□□□ 0.14
MSH5-201ENST00000375703 PI4KBQ9UBF8 816 aa15.91■□□□□ 0.14
MSH5-201ENST00000375703 ARFGEF1Q9Y6D6 1849 aa15.91■□□□□ 0.14
MSH5-201ENST00000375703 DDTLA6NHG4 134 aaPredicted RBP15.91■□□□□ 0.14
MSH5-201ENST00000375703 F5H6K3 240 aa15.91■□□□□ 0.14
MSH5-201ENST00000375703 CLIC2O15247 247 aa15.91■□□□□ 0.14
MSH5-201ENST00000375703 GCNT3O95395 438 aa15.91■□□□□ 0.14
MSH5-201ENST00000375703 PRKCIP41743 596 aa15.91■□□□□ 0.14
MSH5-201ENST00000375703 CASP4P49662 377 aa15.91■□□□□ 0.14
MSH5-201ENST00000375703 KLRC3Q07444 240 aa15.91■□□□□ 0.14
MSH5-201ENST00000375703 FAM107BQ9H098 131 aa15.91■□□□□ 0.14
MSH5-201ENST00000375703 SREBF1P36956 1147 aa15.9■□□□□ 0.14
MSH5-201ENST00000375703 ATP1A2P50993 1020 aa15.9■□□□□ 0.14
MSH5-201ENST00000375703 VPS36Q86VN1 386 aa15.9■□□□□ 0.14
MSH5-201ENST00000375703 CD302Q8IX05 232 aa15.9■□□□□ 0.14
MSH5-201ENST00000375703 EFCAB13Q8IY85 973 aa15.9■□□□□ 0.14
MSH5-201ENST00000375703 LRRC57Q8N9N7 239 aa15.9■□□□□ 0.14
MSH5-201ENST00000375703 SCFD2Q8WU76 684 aa15.9■□□□□ 0.14
MSH5-201ENST00000375703 PPM1EQ8WY54 764 aa15.9■□□□□ 0.14
MSH5-201ENST00000375703 TAF1DQ9H5J8 278 aaPredicted RBP15.9■□□□□ 0.14
MSH5-201ENST00000375703 PCDHB13Q9Y5F0 798 aa15.9■□□□□ 0.14
MSH5-201ENST00000375703 MSH4O15457 936 aa15.9■□□□□ 0.14
MSH5-201ENST00000375703 TBCAO75347 108 aaKnown RBP15.9■□□□□ 0.14
MSH5-201ENST00000375703 ZNF76P36508 570 aa15.9■□□□□ 0.14
MSH5-201ENST00000375703 ICA1Q05084 483 aa15.9■□□□□ 0.14
MSH5-201ENST00000375703 PTPROQ16827 1216 aa15.9■□□□□ 0.14
MSH5-201ENST00000375703 TPCN2Q8NHX9 752 aa15.9■□□□□ 0.14
MSH5-201ENST00000375703 ACTRT1Q8TDG2 376 aa15.9■□□□□ 0.14
MSH5-201ENST00000375703 LMBR1Q8WVP7 490 aa15.9■□□□□ 0.14
MSH5-201ENST00000375703 BCAS3Q9H6U6 928 aa15.9■□□□□ 0.14
MSH5-201ENST00000375703 MYH4Q9Y623 1939 aa15.9■□□□□ 0.14
MSH5-201ENST00000375703 SFI1A8K8P3 1242 aa15.89■□□□□ 0.13
MSH5-201ENST00000375703 TMCO5BA8MYB1 307 aa15.89■□□□□ 0.13
MSH5-201ENST00000375703 RBM5P52756 815 aaKnown RBP eCLIP15.89■□□□□ 0.13
MSH5-201ENST00000375703 KCNA1Q09470 495 aa15.89■□□□□ 0.13
MSH5-201ENST00000375703 PDCLQ13371 301 aa15.89■□□□□ 0.13
MSH5-201ENST00000375703 HLTFQ14527 1009 aaKnown RBP eCLIP15.89■□□□□ 0.13
MSH5-201ENST00000375703 BMT2Q1RMZ1 405 aa15.89■□□□□ 0.13
MSH5-201ENST00000375703 SLC35C1Q96A29 364 aa15.89■□□□□ 0.13
MSH5-201ENST00000375703 ZDHHC15Q96MV8 337 aa15.89■□□□□ 0.13
MSH5-201ENST00000375703 EIF2AK1Q9BQI3 630 aaKnown RBP15.89■□□□□ 0.13
MSH5-201ENST00000375703 RUSC1Q9BVN2 902 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms