RNA–Protein interactions for RNA: ENST00000375669.7

TUBGCP3-202, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-202ENST00000375669 KRT71Q3SY84 523 aa19.59■□□□□ 0.73
TUBGCP3-202ENST00000375669 CELF4Q9BZC1 486 aaKnown RBP19.59■□□□□ 0.73
TUBGCP3-202ENST00000375669 YIPF3Q9GZM5 350 aa19.59■□□□□ 0.73
TUBGCP3-202ENST00000375669 ASAP2O43150 1006 aa19.58■□□□□ 0.73
TUBGCP3-202ENST00000375669 HIBADHP31937 336 aaKnown RBP19.58■□□□□ 0.73
TUBGCP3-202ENST00000375669 KLHL30Q0D2K2 578 aa19.58■□□□□ 0.73
TUBGCP3-202ENST00000375669 CALCRLQ16602 461 aa19.58■□□□□ 0.73
TUBGCP3-202ENST00000375669 CLEC10AQ8IUN9 316 aa19.58■□□□□ 0.73
TUBGCP3-202ENST00000375669 ZNF317Q96PQ6 595 aaPredicted RBP19.58■□□□□ 0.73
TUBGCP3-202ENST00000375669 CPSF2Q9P2I0 782 aaKnown RBP19.58■□□□□ 0.73
TUBGCP3-202ENST00000375669 AMACRQ9UHK6 382 aa19.58■□□□□ 0.73
TUBGCP3-202ENST00000375669 COPB2P35606 906 aa19.58■□□□□ 0.72
TUBGCP3-202ENST00000375669 BLMHQ13867 455 aa19.58■□□□□ 0.72
TUBGCP3-202ENST00000375669 FAM133BQ5BKY9 247 aaKnown RBP19.58■□□□□ 0.72
TUBGCP3-202ENST00000375669 THEMIS2Q5TEJ8 643 aa19.58■□□□□ 0.72
TUBGCP3-202ENST00000375669 C12orf60Q5U649 245 aa19.58■□□□□ 0.72
TUBGCP3-202ENST00000375669 UNC13DQ70J99 1090 aa19.58■□□□□ 0.72
TUBGCP3-202ENST00000375669 PIGWQ7Z7B1 504 aa19.58■□□□□ 0.72
TUBGCP3-202ENST00000375669 DGKHQ86XP1 1220 aa19.58■□□□□ 0.72
TUBGCP3-202ENST00000375669 CNKSR1Q969H4 720 aa19.58■□□□□ 0.72
TUBGCP3-202ENST00000375669 ZMYND12Q9H0C1 365 aa19.58■□□□□ 0.72
TUBGCP3-202ENST00000375669 SSU72P8A0A1W2PR75 194 aa19.57■□□□□ 0.72
TUBGCP3-202ENST00000375669 PCP11498 1178 aaKnown RBP19.57■□□□□ 0.72
TUBGCP3-202ENST00000375669 PRPHP41219 470 aa19.57■□□□□ 0.72
TUBGCP3-202ENST00000375669 NAB2Q15742 525 aa19.57■□□□□ 0.72
TUBGCP3-202ENST00000375669 AK8Q96MA6 479 aa19.57■□□□□ 0.72
TUBGCP3-202ENST00000375669 DPH5Q9H2P9 285 aa19.57■□□□□ 0.72
TUBGCP3-202ENST00000375669 BSDC1Q9NW68 430 aaPredicted RBP19.57■□□□□ 0.72
TUBGCP3-202ENST00000375669 SHANK3Q9BYB0 1731 aa19.57■□□□□ 0.72
TUBGCP3-202ENST00000375669 MYH7BA7E2Y1 1941 aa19.57■□□□□ 0.72
TUBGCP3-202ENST00000375669 CCND1P24385 295 aa19.57■□□□□ 0.72
TUBGCP3-202ENST00000375669 PDE6BP35913 854 aa19.57■□□□□ 0.72
TUBGCP3-202ENST00000375669 LRP5O75197 1615 aa19.56■□□□□ 0.72
TUBGCP3-202ENST00000375669 RBAK-RBAKDNI3L0D1 243 aa19.56■□□□□ 0.72
TUBGCP3-202ENST00000375669 DAPK3O43293 454 aa19.56■□□□□ 0.72
TUBGCP3-202ENST00000375669 NQO1P15559 274 aaKnown RBP19.56■□□□□ 0.72
TUBGCP3-202ENST00000375669 SOGA3Q5TF21 947 aa19.56■□□□□ 0.72
TUBGCP3-202ENST00000375669 TRPM8Q7Z2W7 1104 aa19.56■□□□□ 0.72
TUBGCP3-202ENST00000375669 TLCD1Q96CP7 247 aa19.56■□□□□ 0.72
TUBGCP3-202ENST00000375669 CUEDC2Q9H467 287 aa19.56■□□□□ 0.72
TUBGCP3-202ENST00000375669 PALM3A6NDB9 673 aaPredicted RBP19.56■□□□□ 0.72
TUBGCP3-202ENST00000375669 PTK2Q05397 1052 aa19.56■□□□□ 0.72
TUBGCP3-202ENST00000375669 TRAF1Q13077 416 aa19.56■□□□□ 0.72
TUBGCP3-202ENST00000375669 UBE2SQ16763 222 aa19.56■□□□□ 0.72
TUBGCP3-202ENST00000375669 AGAP1Q9UPQ3 857 aa19.56■□□□□ 0.72
TUBGCP3-202ENST00000375669 ATP6V0A2Q9Y487 856 aa19.56■□□□□ 0.72
TUBGCP3-202ENST00000375669 PCDHGC5Q9Y5F6 944 aa19.56■□□□□ 0.72
TUBGCP3-202ENST00000375669 SMIM23A6NLE4 172 aa19.55■□□□□ 0.72
TUBGCP3-202ENST00000375669 BHMG1C9JSJ3 638 aaPredicted RBP19.55■□□□□ 0.72
TUBGCP3-202ENST00000375669 LAD1O00515 517 aa19.55■□□□□ 0.72
TUBGCP3-202ENST00000375669 SART1O43290 800 aaKnown RBP19.55■□□□□ 0.72
TUBGCP3-202ENST00000375669 SERPING1P05155 500 aa19.55■□□□□ 0.72
TUBGCP3-202ENST00000375669 LINGO3P0C6S8 592 aa19.55■□□□□ 0.72
TUBGCP3-202ENST00000375669 SSR1P43307 286 aaKnown RBP19.55■□□□□ 0.72
TUBGCP3-202ENST00000375669 TNNI2P48788 182 aa19.55■□□□□ 0.72
TUBGCP3-202ENST00000375669 REXO1Q8N1G1 1221 aaKnown RBP19.55■□□□□ 0.72
TUBGCP3-202ENST00000375669 GUF1Q8N442 669 aaKnown RBP19.55■□□□□ 0.72
TUBGCP3-202ENST00000375669 COL4A3BPQ9Y5P4 624 aa19.55■□□□□ 0.72
TUBGCP3-202ENST00000375669 A6NHS1 94 aa19.55■□□□□ 0.72
TUBGCP3-202ENST00000375669 E9PMD0 336 aa19.55■□□□□ 0.72
TUBGCP3-202ENST00000375669 EDIL3O43854 480 aa19.55■□□□□ 0.72
TUBGCP3-202ENST00000375669 FESP07332 822 aa19.55■□□□□ 0.72
TUBGCP3-202ENST00000375669 SLC9A1P19634 815 aa19.55■□□□□ 0.72
TUBGCP3-202ENST00000375669 RAB27AP51159 221 aa19.55■□□□□ 0.72
TUBGCP3-202ENST00000375669 KCNJ2P63252 427 aa19.55■□□□□ 0.72
TUBGCP3-202ENST00000375669 SLC18A3Q16572 532 aa19.55■□□□□ 0.72
TUBGCP3-202ENST00000375669 FBXO33Q7Z6M2 555 aa19.55■□□□□ 0.72
TUBGCP3-202ENST00000375669 SCFD2Q8WU76 684 aa19.55■□□□□ 0.72
TUBGCP3-202ENST00000375669 TAF4BQ92750 862 aa19.55■□□□□ 0.72
TUBGCP3-202ENST00000375669 C6orf50Q9HD87 102 aa19.55■□□□□ 0.72
TUBGCP3-202ENST00000375669 AFF2P51816 1311 aa19.54■□□□□ 0.72
TUBGCP3-202ENST00000375669 USP17L5A8MUK1 530 aa19.54■□□□□ 0.72
TUBGCP3-202ENST00000375669 AHCYL1O43865 530 aa19.54■□□□□ 0.72
TUBGCP3-202ENST00000375669 PARP10Q53GL7 1025 aa19.54■□□□□ 0.72
TUBGCP3-202ENST00000375669 TMC3Q7Z5M5 1100 aa19.54■□□□□ 0.72
TUBGCP3-202ENST00000375669 ANKS1AQ92625 1134 aa19.54■□□□□ 0.72
TUBGCP3-202ENST00000375669 SAMD15Q9P1V8 674 aa19.54■□□□□ 0.72
TUBGCP3-202ENST00000375669 PNMA2Q9UL42 364 aa19.54■□□□□ 0.72
TUBGCP3-202ENST00000375669 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.54■□□□□ 0.72
TUBGCP3-202ENST00000375669 MMEP08473 750 aa19.54■□□□□ 0.72
TUBGCP3-202ENST00000375669 CHN1P15882 459 aa19.54■□□□□ 0.72
TUBGCP3-202ENST00000375669 EPS15P42566 896 aa19.54■□□□□ 0.72
TUBGCP3-202ENST00000375669 ALDH5A1P51649 535 aaPredicted RBP19.54■□□□□ 0.72
TUBGCP3-202ENST00000375669 MKRN4PQ13434 485 aaPredicted RBP19.54■□□□□ 0.72
TUBGCP3-202ENST00000375669 RPS6KA1Q15418 735 aa19.54■□□□□ 0.72
TUBGCP3-202ENST00000375669 KRT25Q7Z3Z0 450 aa19.54■□□□□ 0.72
TUBGCP3-202ENST00000375669 MYOCDQ8IZQ8 938 aa19.54■□□□□ 0.72
TUBGCP3-202ENST00000375669 BCAS3Q9H6U6 928 aa19.54■□□□□ 0.72
TUBGCP3-202ENST00000375669 LUC7LQ9NQ29 371 aaKnown RBP19.54■□□□□ 0.72
TUBGCP3-202ENST00000375669 LOC102724428A0A0B4J2F2 783 aa19.53■□□□□ 0.72
TUBGCP3-202ENST00000375669 F8VZ95 297 aa19.53■□□□□ 0.72
TUBGCP3-202ENST00000375669 RPS6KA3P51812 740 aa19.53■□□□□ 0.72
TUBGCP3-202ENST00000375669 SIK1P57059 783 aa19.53■□□□□ 0.72
TUBGCP3-202ENST00000375669 COASYQ13057 564 aa19.53■□□□□ 0.72
TUBGCP3-202ENST00000375669 SNX1Q13596 522 aa19.53■□□□□ 0.72
TUBGCP3-202ENST00000375669 LRRC34Q8IZ02 419 aa19.53■□□□□ 0.72
TUBGCP3-202ENST00000375669 DAGLBQ8NCG7 672 aa19.53■□□□□ 0.72
TUBGCP3-202ENST00000375669 ELAC2Q9BQ52 826 aaKnown RBP19.53■□□□□ 0.72
TUBGCP3-202ENST00000375669 CEP72Q9P209 647 aa19.53■□□□□ 0.72
TUBGCP3-202ENST00000375669 SEC63Q9UGP8 760 aaKnown RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms