RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 GAP43P17677 238 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 LRRC14Q15048 493 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 ZNF449Q6P9G9 518 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 RPAINQ86UA6 219 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 MPHOSPH6Q99547 160 aaKnown RBP7.08□□□□□ -1.28
SMC1A-202ENST00000375340 BHMT2Q9H2M3 363 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 ECT2Q9H8V3 914 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 TMOD1P28289 359 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 ADSSL1Q8N142 457 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.08□□□□□ -1.28
SMC1A-202ENST00000375340 LRRC8CQ8TDW0 803 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 FAM84BQ96KN1 310 aaPredicted RBP7.08□□□□□ -1.28
SMC1A-202ENST00000375340 EFCC1Q9HA90 598 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 SNX12Q9UMY4 172 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 GOLGA8SH3BPF8 625 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 GOLGA8MH3BSY2 632 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 STXBP3O00186 592 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 KCNJ6P48051 423 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 RCN2Q14257 317 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 ALKBH5Q6P6C2 394 aaKnown RBP7.08□□□□□ -1.28
SMC1A-202ENST00000375340 FOXR1Q6PIV2 292 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 LRRC31Q6UY01 552 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 METTL13Q8N6R0 699 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 SPATA4Q8NEY3 305 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 LEMD3Q9Y2U8 911 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 ARHGAP42A6NI28 874 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 RASGRF2O14827 1237 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 SUN1O94901 812 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 SRGNP10124 158 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 NSFP46459 744 aaKnown RBP7.08□□□□□ -1.28
SMC1A-202ENST00000375340 SCARA5Q6ZMJ2 495 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 ACCSQ96QU6 501 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 CSRNP1Q96S65 589 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 PPP1R16BQ96T49 567 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 NUP85Q9BW27 656 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 AMNQ9BXJ7 453 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 TMEM60Q9H2L4 133 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 CNOT10Q9H9A5 744 aaKnown RBP7.08□□□□□ -1.28
SMC1A-202ENST00000375340 ODF2LQ9ULJ1 636 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 H0YIN7 160 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 ICE2Q659A1 982 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 SCYL2Q6P3W7 929 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 MIGA2Q7L4E1 593 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 MAD2L2Q9UI95 211 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 A0A087X0B3 334 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 ANO9A1A5B4 782 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 CROCCP2Q86T23 111 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 ZBTB33Q86T24 672 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 DEPTORQ8TB45 409 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 NEK9Q8TD19 979 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 MAGED2Q9UNF1 606 aaPredicted RBP7.08□□□□□ -1.28
SMC1A-202ENST00000375340 PMS2P54278 862 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 PPP2R2AP63151 447 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 HEMGNQ9BXL5 484 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 INTS2Q9H0H0 1204 aaKnown RBP7.08□□□□□ -1.28
SMC1A-202ENST00000375340 ZNF148Q9UQR1 794 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 MRPL11Q9Y3B7 192 aaKnown RBP7.08□□□□□ -1.28
SMC1A-202ENST00000375340 CCDC195A0A1B0GUA6 201 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 GRID2IPA4D2P6 1211 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 TECPR2O15040 1411 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 TROVE2P10155 538 aaKnown RBP eCLIP7.08□□□□□ -1.28
SMC1A-202ENST00000375340 KCTD19Q17RG1 926 aaPredicted RBP7.08□□□□□ -1.28
SMC1A-202ENST00000375340 DYDC2Q96IM9 177 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 FUT8Q9BYC5 575 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 ZNF335Q9H4Z2 1342 aaPredicted RBP7.08□□□□□ -1.28
SMC1A-202ENST00000375340 L2HGDHQ9H9P8 463 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 MYO1FO00160 1098 aa7.07□□□□□ -1.28
SMC1A-202ENST00000375340 PHBP35232 272 aa7.07□□□□□ -1.28
SMC1A-202ENST00000375340 COPB2P35606 906 aa7.07□□□□□ -1.28
SMC1A-202ENST00000375340 BFSP1Q12934 665 aa7.07□□□□□ -1.28
SMC1A-202ENST00000375340 GRAPQ13588 217 aa7.07□□□□□ -1.28
SMC1A-202ENST00000375340 LARGE2Q8N3Y3 721 aa7.07□□□□□ -1.28
SMC1A-202ENST00000375340 GRAPLQ8TC17 118 aaPredicted RBP7.07□□□□□ -1.28
SMC1A-202ENST00000375340 ZWILCHQ9H900 591 aa7.07□□□□□ -1.28
SMC1A-202ENST00000375340 PARVGQ9HBI0 331 aa7.07□□□□□ -1.28
SMC1A-202ENST00000375340 SYNJ2BP-COX16A0A087WUM0 186 aa7.07□□□□□ -1.28
SMC1A-202ENST00000375340 RASSF2P50749 326 aa7.07□□□□□ -1.28
SMC1A-202ENST00000375340 MAIP1Q8WWC4 291 aa7.07□□□□□ -1.28
SMC1A-202ENST00000375340 NSUN4Q96CB9 384 aaKnown RBP7.07□□□□□ -1.28
SMC1A-202ENST00000375340 COX16Q9P0S2 106 aa7.07□□□□□ -1.28
SMC1A-202ENST00000375340 CPSF2Q9P2I0 782 aaKnown RBP7.07□□□□□ -1.28
SMC1A-202ENST00000375340 GINS2Q9Y248 185 aa7.07□□□□□ -1.28
SMC1A-202ENST00000375340 MYMKA6NI61 221 aa7.07□□□□□ -1.28
SMC1A-202ENST00000375340 PSMD14O00487 310 aa7.07□□□□□ -1.28
SMC1A-202ENST00000375340 STAT2P52630 851 aa7.07□□□□□ -1.28
SMC1A-202ENST00000375340 EZH2Q15910 746 aaKnown RBP7.07□□□□□ -1.28
SMC1A-202ENST00000375340 PARP9Q8IXQ6 854 aa7.07□□□□□ -1.28
SMC1A-202ENST00000375340 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.07□□□□□ -1.284e-6■□□□□ 10.5
SMC1A-202ENST00000375340 MXD3Q9BW11 206 aa7.07□□□□□ -1.28
SMC1A-202ENST00000375340 TYW1Q9NV66 732 aaKnown RBP7.07□□□□□ -1.28
SMC1A-202ENST00000375340 TMOD4Q9NZQ9 345 aa7.07□□□□□ -1.28
SMC1A-202ENST00000375340 OVOS2A0A0G2JMS6 1433 aa7.07□□□□□ -1.28
SMC1A-202ENST00000375340 LRRIQ4A6NIV6 560 aa7.07□□□□□ -1.28
SMC1A-202ENST00000375340 hCG_1984214I3L0E3 225 aa7.07□□□□□ -1.28
SMC1A-202ENST00000375340 DAPK3O43293 454 aa7.07□□□□□ -1.28
SMC1A-202ENST00000375340 TRIM49P0CI25 452 aa7.07□□□□□ -1.28
SMC1A-202ENST00000375340 TRIM49CP0CI26 452 aa7.07□□□□□ -1.28
SMC1A-202ENST00000375340 STK4Q13043 487 aa7.07□□□□□ -1.28
SMC1A-202ENST00000375340 GLE1Q53GS7 698 aaKnown RBP7.07□□□□□ -1.28
SMC1A-202ENST00000375340 TRIM65Q6PJ69 517 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms