RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 THNSL1Q8IYQ7 743 aa16.15■□□□□ 0.18
PTCH1-202ENST00000375271 SMRP1Q8NCR6 262 aa16.15■□□□□ 0.18
PTCH1-202ENST00000375271 SPPL3Q8TCT6 385 aa16.15■□□□□ 0.18
PTCH1-202ENST00000375271 RPGRIP1Q96KN7 1286 aa16.15■□□□□ 0.18
PTCH1-202ENST00000375271 AGO3Q9H9G7 860 aaKnown RBP16.15■□□□□ 0.18
PTCH1-202ENST00000375271 JADE2Q9NQC1 790 aa16.15■□□□□ 0.18
PTCH1-202ENST00000375271 TCEAL9Q9UHQ7 104 aa16.15■□□□□ 0.18
PTCH1-202ENST00000375271 BARX2Q9UMQ3 279 aaPredicted RBP16.15■□□□□ 0.18
PTCH1-202ENST00000375271 BACH1O14867 736 aa16.14■□□□□ 0.17
PTCH1-202ENST00000375271 PRC1O43663 620 aa16.14■□□□□ 0.17
PTCH1-202ENST00000375271 EYA4O95677 639 aa16.14■□□□□ 0.17
PTCH1-202ENST00000375271 LINC00271P0C7V0 271 aa16.14■□□□□ 0.17
PTCH1-202ENST00000375271 PTH1RQ03431 593 aa16.14■□□□□ 0.17
PTCH1-202ENST00000375271 UBE3AQ05086 875 aa16.14■□□□□ 0.17
PTCH1-202ENST00000375271 COASYQ13057 564 aa16.14■□□□□ 0.17
PTCH1-202ENST00000375271 SYNE3Q6ZMZ3 975 aa16.14■□□□□ 0.17
PTCH1-202ENST00000375271 ADGRD2Q7Z7M1 963 aa16.14■□□□□ 0.17
PTCH1-202ENST00000375271 NME8Q8N427 588 aa16.14■□□□□ 0.17
PTCH1-202ENST00000375271 NEK1Q96PY6 1258 aa16.14■□□□□ 0.17
PTCH1-202ENST00000375271 PHF7Q9BWX1 381 aaPredicted RBP16.14■□□□□ 0.17
PTCH1-202ENST00000375271 CELF4Q9BZC1 486 aaKnown RBP16.14■□□□□ 0.17
PTCH1-202ENST00000375271 IL25Q9H293 177 aa16.14■□□□□ 0.17
PTCH1-202ENST00000375271 TLR9Q9NR96 1032 aa16.14■□□□□ 0.17
PTCH1-202ENST00000375271 PCDHA6Q9UN73 950 aa16.14■□□□□ 0.17
PTCH1-202ENST00000375271 USP15Q9Y4E8 981 aaPredicted RBP16.14■□□□□ 0.17
PTCH1-202ENST00000375271 PCDHA8Q9Y5H6 950 aa16.14■□□□□ 0.17
PTCH1-202ENST00000375271 PCDHA2Q9Y5H9 948 aa16.14■□□□□ 0.17
PTCH1-202ENST00000375271 WDFY4Q6ZS81 3184 aa16.14■□□□□ 0.17
PTCH1-202ENST00000375271 IGSF9BQ9UPX0 1349 aa16.14■□□□□ 0.17
PTCH1-202ENST00000375271 KIAA1671Q9BY89 1806 aa16.13■□□□□ 0.17
PTCH1-202ENST00000375271 TBKBP1A7MCY6 615 aa16.13■□□□□ 0.17
PTCH1-202ENST00000375271 RPS6KA5O75582 802 aa16.13■□□□□ 0.17
PTCH1-202ENST00000375271 PLEKHA8P1O95397 391 aa16.13■□□□□ 0.17
PTCH1-202ENST00000375271 MCM5P33992 734 aa16.13■□□□□ 0.17
PTCH1-202ENST00000375271 ZNF76P36508 570 aa16.13■□□□□ 0.17
PTCH1-202ENST00000375271 SARSP49591 514 aaKnown RBP16.13■□□□□ 0.17
PTCH1-202ENST00000375271 STAT5BP51692 787 aa16.13■□□□□ 0.17
PTCH1-202ENST00000375271 MARCH8Q5T0T0 291 aa16.13■□□□□ 0.17
PTCH1-202ENST00000375271 FAM160B1Q5W0V3 765 aa16.13■□□□□ 0.17
PTCH1-202ENST00000375271 FAM43BQ6ZT52 329 aaPredicted RBP16.13■□□□□ 0.17
PTCH1-202ENST00000375271 BMP8AQ7Z5Y6 402 aa16.13■□□□□ 0.17
PTCH1-202ENST00000375271 CCDC82Q8N4S0 544 aa16.13■□□□□ 0.17
PTCH1-202ENST00000375271 IGDCC4Q8TDY8 1250 aa16.13■□□□□ 0.17
PTCH1-202ENST00000375271 LINC01599Q8WXQ3 324 aa16.13■□□□□ 0.17
PTCH1-202ENST00000375271 MSLNLQ96KJ4 702 aa16.13■□□□□ 0.17
PTCH1-202ENST00000375271 CDCA3Q99618 268 aaPredicted RBP16.13■□□□□ 0.17
PTCH1-202ENST00000375271 IRF2BPLQ9H1B7 796 aa16.13■□□□□ 0.17
PTCH1-202ENST00000375271 LY9Q9HBG7 655 aa16.13■□□□□ 0.17
PTCH1-202ENST00000375271 C1orf112Q9NSG2 853 aa16.13■□□□□ 0.17
PTCH1-202ENST00000375271 PUF60Q9UHX1 559 aaKnown RBP16.13■□□□□ 0.17
PTCH1-202ENST00000375271 UBIAD1Q9Y5Z9 338 aa16.13■□□□□ 0.17
PTCH1-202ENST00000375271 SLC12A7Q9Y666 1083 aa16.13■□□□□ 0.17
PTCH1-202ENST00000375271 SMIM35A0A1B0GVV1 85 aa16.12■□□□□ 0.17
PTCH1-202ENST00000375271 DNAJB1P25685 340 aa16.12■□□□□ 0.17
PTCH1-202ENST00000375271 CHMLP26374 656 aa16.12■□□□□ 0.17
PTCH1-202ENST00000375271 SLC26A2P50443 739 aa16.12■□□□□ 0.17
PTCH1-202ENST00000375271 ZXDAP98168 799 aa16.12■□□□□ 0.17
PTCH1-202ENST00000375271 TMEM266Q2M3C6 531 aa16.12■□□□□ 0.17
PTCH1-202ENST00000375271 PDE12Q6L8Q7 609 aaKnown RBP16.12■□□□□ 0.17
PTCH1-202ENST00000375271 PLPPR4Q7Z2D5 763 aa16.12■□□□□ 0.17
PTCH1-202ENST00000375271 MB21D2Q8IYB1 491 aaPredicted RBP16.12■□□□□ 0.17
PTCH1-202ENST00000375271 FBXL6Q8N531 539 aa16.12■□□□□ 0.17
PTCH1-202ENST00000375271 TRAPPC12Q8WVT3 735 aa16.12■□□□□ 0.17
PTCH1-202ENST00000375271 ZBTB10Q96DT7 871 aa16.12■□□□□ 0.17
PTCH1-202ENST00000375271 TMEM87BQ96K49 555 aa16.12■□□□□ 0.17
PTCH1-202ENST00000375271 MTA3Q9BTC8 594 aa16.12■□□□□ 0.17
PTCH1-202ENST00000375271 LOC730098B7Z3J9 87 aa16.11■□□□□ 0.17
PTCH1-202ENST00000375271 GPR182O15218 404 aa16.11■□□□□ 0.17
PTCH1-202ENST00000375271 RXRAP19793 462 aa16.11■□□□□ 0.17
PTCH1-202ENST00000375271 ANTXR2P58335 489 aa16.11■□□□□ 0.17
PTCH1-202ENST00000375271 ACTR2P61160 394 aa16.11■□□□□ 0.17
PTCH1-202ENST00000375271 SIGLEC14Q08ET2 396 aa16.11■□□□□ 0.17
PTCH1-202ENST00000375271 CAMK1Q14012 370 aa16.11■□□□□ 0.17
PTCH1-202ENST00000375271 PLCB4Q15147 1175 aa16.11■□□□□ 0.17
PTCH1-202ENST00000375271 CKAP2LQ8IYA6 745 aa16.11■□□□□ 0.17
PTCH1-202ENST00000375271 ABI1Q8IZP0 508 aa16.11■□□□□ 0.17
PTCH1-202ENST00000375271 CMTR1Q8N1G2 835 aaKnown RBP16.11■□□□□ 0.17
PTCH1-202ENST00000375271 SRBD1Q8N5C6 995 aaKnown RBP16.11■□□□□ 0.17
PTCH1-202ENST00000375271 MXRA8Q9BRK3 442 aa16.11■□□□□ 0.17
PTCH1-202ENST00000375271 ATP6V0A4Q9HBG4 840 aa16.11■□□□□ 0.17
PTCH1-202ENST00000375271 ENTPD7Q9NQZ7 604 aa16.11■□□□□ 0.17
PTCH1-202ENST00000375271 KCNH7Q9NS40 1196 aa16.11■□□□□ 0.17
PTCH1-202ENST00000375271 TMEM260Q9NX78 707 aa16.11■□□□□ 0.17
PTCH1-202ENST00000375271 CLEC1BQ9P126 229 aa16.11■□□□□ 0.17
PTCH1-202ENST00000375271 RBM8AQ9Y5S9 174 aaKnown RBP16.11■□□□□ 0.17
PTCH1-202ENST00000375271 NFASCO94856 1347 aa16.11■□□□□ 0.17
PTCH1-202ENST00000375271 ZNF318Q5VUA4 2279 aa16.1■□□□□ 0.17
PTCH1-202ENST00000375271 hCG_1642624A0A1W2PR95 340 aa16.1■□□□□ 0.17
PTCH1-202ENST00000375271 PER2O15055 1255 aa16.1■□□□□ 0.17
PTCH1-202ENST00000375271 ST18O60284 1047 aa16.1■□□□□ 0.17
PTCH1-202ENST00000375271 FGF18O76093 207 aa16.1■□□□□ 0.17
PTCH1-202ENST00000375271 GSPT1P15170 499 aaKnown RBP16.1■□□□□ 0.17
PTCH1-202ENST00000375271 LAG3P18627 525 aa16.1■□□□□ 0.17
PTCH1-202ENST00000375271 GATMP50440 423 aa16.1■□□□□ 0.17
PTCH1-202ENST00000375271 NAPAP54920 295 aa16.1■□□□□ 0.17
PTCH1-202ENST00000375271 MTHFD1LQ6UB35 978 aa16.1■□□□□ 0.17
PTCH1-202ENST00000375271 MICU3Q86XE3 530 aa16.1■□□□□ 0.17
PTCH1-202ENST00000375271 PRSS33Q8NF86 280 aa16.1■□□□□ 0.17
PTCH1-202ENST00000375271 EXOC6Q8TAG9 804 aa16.1■□□□□ 0.17
PTCH1-202ENST00000375271 ADAM2Q99965 735 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms