RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 NPY5RQ15761 445 aa14.05□□□□□ -0.16
PRPF4-201ENST00000374198 SLC27A3Q5K4L6 730 aa14.05□□□□□ -0.16
PRPF4-201ENST00000374198 NCAPG2Q86XI2 1143 aa14.05□□□□□ -0.16
PRPF4-201ENST00000374198 SEC14L1Q92503 715 aa14.05□□□□□ -0.16
PRPF4-201ENST00000374198 TBC1D5Q92609 795 aa14.05□□□□□ -0.16
PRPF4-201ENST00000374198 RPS6KC1Q96S38 1066 aa14.05□□□□□ -0.16
PRPF4-201ENST00000374198 TXLNGYQ9BZA5 131 aa14.05□□□□□ -0.16
PRPF4-201ENST00000374198 SUN1O94901 812 aa14.05□□□□□ -0.16
PRPF4-201ENST00000374198 CALB2P22676 271 aa14.05□□□□□ -0.16
PRPF4-201ENST00000374198 MCAMP43121 646 aa14.05□□□□□ -0.16
PRPF4-201ENST00000374198 IFNAR2P48551 515 aa14.05□□□□□ -0.16
PRPF4-201ENST00000374198 IFNL3Q8IZI9 196 aa14.05□□□□□ -0.16
PRPF4-201ENST00000374198 DTNBP1Q96EV8 351 aa14.05□□□□□ -0.16
PRPF4-201ENST00000374198 NLRP3Q96P20 1036 aa14.05□□□□□ -0.16
PRPF4-201ENST00000374198 NAPBQ9H115 298 aa14.05□□□□□ -0.16
PRPF4-201ENST00000374198 RNPEPL1Q9HAU8 725 aa14.05□□□□□ -0.16
PRPF4-201ENST00000374198 EPB41L4AQ9HCS5 686 aaPredicted RBP14.05□□□□□ -0.16
PRPF4-201ENST00000374198 FAM114A2Q9NRY5 505 aa14.05□□□□□ -0.16
PRPF4-201ENST00000374198 LRRC4BQ9NT99 713 aa14.05□□□□□ -0.16
PRPF4-201ENST00000374198 AMACRQ9UHK6 382 aa14.05□□□□□ -0.16
PRPF4-201ENST00000374198 PNMA3Q9UL41 463 aa14.05□□□□□ -0.16
PRPF4-201ENST00000374198 ERVV-2B6SEH9 535 aa14.05□□□□□ -0.16
PRPF4-201ENST00000374198 NUDT17P0C025 328 aa14.05□□□□□ -0.16
PRPF4-201ENST00000374198 MAGEA8P43361 318 aa14.05□□□□□ -0.16
PRPF4-201ENST00000374198 POLE2P56282 527 aa14.05□□□□□ -0.16
PRPF4-201ENST00000374198 DYNC1I2Q13409 638 aaKnown RBP14.05□□□□□ -0.16
PRPF4-201ENST00000374198 KCTD19Q17RG1 926 aaPredicted RBP14.05□□□□□ -0.16
PRPF4-201ENST00000374198 SLC9C1Q4G0N8 1177 aa14.05□□□□□ -0.16
PRPF4-201ENST00000374198 ARL6IP4Q66PJ3 421 aaKnown RBP14.05□□□□□ -0.16
PRPF4-201ENST00000374198 DZIP3Q86Y13 1208 aaKnown RBP14.05□□□□□ -0.16
PRPF4-201ENST00000374198 ANKS1AQ92625 1134 aa14.05□□□□□ -0.16
PRPF4-201ENST00000374198 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.05□□□□□ -0.16
PRPF4-201ENST00000374198 V9GY48 417 aaPredicted RBP14.05□□□□□ -0.16
PRPF4-201ENST00000374198 ITGB4P16144 1822 aa14.04□□□□□ -0.16
PRPF4-201ENST00000374198 CCDC188H7C350 402 aa14.04□□□□□ -0.16
PRPF4-201ENST00000374198 PDLIM1O00151 329 aa14.04□□□□□ -0.16
PRPF4-201ENST00000374198 PRPF3O43395 683 aaKnown RBP14.04□□□□□ -0.16
PRPF4-201ENST00000374198 IDH1O75874 414 aaKnown RBP14.04□□□□□ -0.16
PRPF4-201ENST00000374198 TRAPPC10P48553 1259 aa14.04□□□□□ -0.16
PRPF4-201ENST00000374198 RNF220Q5VTB9 566 aa14.04□□□□□ -0.16
PRPF4-201ENST00000374198 RBM12BQ8IXT5 1001 aaKnown RBP14.04□□□□□ -0.16
PRPF4-201ENST00000374198 KIFAP3Q92845 792 aa14.04□□□□□ -0.16
PRPF4-201ENST00000374198 ZNF496Q96IT1 587 aaPredicted RBP14.04□□□□□ -0.16
PRPF4-201ENST00000374198 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.04□□□□□ -0.16
PRPF4-201ENST00000374198 KBTBD4Q9NVX7 518 aa14.04□□□□□ -0.16
PRPF4-201ENST00000374198 TLDC2A0PJX2 215 aa14.04□□□□□ -0.16
PRPF4-201ENST00000374198 CCDC169A6NNP5 214 aa14.04□□□□□ -0.16
PRPF4-201ENST00000374198 PGRMC1O00264 195 aaKnown RBP14.04□□□□□ -0.16
PRPF4-201ENST00000374198 KRIT1O00522 736 aa14.04□□□□□ -0.16
PRPF4-201ENST00000374198 ACADSP16219 412 aa14.04□□□□□ -0.16
PRPF4-201ENST00000374198 GNAQP50148 359 aa14.04□□□□□ -0.16
PRPF4-201ENST00000374198 PEX5P50542 639 aa14.04□□□□□ -0.16
PRPF4-201ENST00000374198 RAD23BP54727 409 aa14.04□□□□□ -0.16
PRPF4-201ENST00000374198 IFI35P80217 286 aaPredicted RBP14.04□□□□□ -0.16
PRPF4-201ENST00000374198 PIK3AP1Q6ZUJ8 805 aa14.04□□□□□ -0.16
PRPF4-201ENST00000374198 RAB3IPQ96QF0 476 aaPredicted RBP14.04□□□□□ -0.16
PRPF4-201ENST00000374198 EDEM3Q9BZQ6 932 aa14.04□□□□□ -0.16
PRPF4-201ENST00000374198 DPH5Q9H2P9 285 aa14.04□□□□□ -0.16
PRPF4-201ENST00000374198 EPB41L4BQ9H329 900 aa14.04□□□□□ -0.16
PRPF4-201ENST00000374198 SLITRK6Q9H5Y7 841 aa14.04□□□□□ -0.16
PRPF4-201ENST00000374198 RXFP1Q9HBX9 757 aa14.04□□□□□ -0.16
PRPF4-201ENST00000374198 PIH1D3Q9NQM4 214 aaKnown RBP14.04□□□□□ -0.16
PRPF4-201ENST00000374198 DLGAP2Q9P1A6 1054 aa14.04□□□□□ -0.16
PRPF4-201ENST00000374198 O00370 1275 aa14.03□□□□□ -0.16
PRPF4-201ENST00000374198 RGS16O15492 202 aaPredicted RBP14.03□□□□□ -0.16
PRPF4-201ENST00000374198 TTI1O43156 1089 aa14.03□□□□□ -0.16
PRPF4-201ENST00000374198 FAM163BP0C2L3 166 aa14.03□□□□□ -0.16
PRPF4-201ENST00000374198 SETSIPP0DME0 302 aa14.03□□□□□ -0.16
PRPF4-201ENST00000374198 CCNB1P14635 433 aa14.03□□□□□ -0.16
PRPF4-201ENST00000374198 RFC5P40937 340 aa14.03□□□□□ -0.16
PRPF4-201ENST00000374198 USP11P51784 963 aa14.03□□□□□ -0.16
PRPF4-201ENST00000374198 FUT2Q10981 343 aa14.03□□□□□ -0.16
PRPF4-201ENST00000374198 STK4Q13043 487 aa14.03□□□□□ -0.16
PRPF4-201ENST00000374198 PPP2R5BQ15173 497 aa14.03□□□□□ -0.16
PRPF4-201ENST00000374198 DIXDC1Q155Q3 683 aa14.03□□□□□ -0.16
PRPF4-201ENST00000374198 SLC15A2Q16348 729 aa14.03□□□□□ -0.16
PRPF4-201ENST00000374198 OR52E8Q6IFG1 317 aa14.03□□□□□ -0.16
PRPF4-201ENST00000374198 FITM2Q8N6M3 262 aa14.03□□□□□ -0.16
PRPF4-201ENST00000374198 FMO2Q99518 471 aa14.03□□□□□ -0.16
PRPF4-201ENST00000374198 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.03□□□□□ -0.163e-6■■■□□ 15.6
PRPF4-201ENST00000374198 MTA3Q9BTC8 594 aa14.03□□□□□ -0.16
PRPF4-201ENST00000374198 VCXQ9H320 206 aa14.03□□□□□ -0.16
PRPF4-201ENST00000374198 AZI2Q9H6S1 392 aa14.03□□□□□ -0.16
PRPF4-201ENST00000374198 UTP11Q9Y3A2 253 aaKnown RBP14.03□□□□□ -0.16
PRPF4-201ENST00000374198 NOC2LQ9Y3T9 749 aaKnown RBP14.03□□□□□ -0.16
PRPF4-201ENST00000374198 ARFGEF2Q9Y6D5 1785 aa14.03□□□□□ -0.16
PRPF4-201ENST00000374198 GJB6O95452 261 aa14.03□□□□□ -0.16
PRPF4-201ENST00000374198 BAG3O95817 575 aa14.03□□□□□ -0.16
PRPF4-201ENST00000374198 SERPING1P05155 500 aa14.03□□□□□ -0.16
PRPF4-201ENST00000374198 PDE6AP16499 860 aa14.03□□□□□ -0.16
PRPF4-201ENST00000374198 SKIV2L2P42285 1042 aaKnown RBP14.03□□□□□ -0.16
PRPF4-201ENST00000374198 PDE4DQ08499 809 aa14.03□□□□□ -0.16
PRPF4-201ENST00000374198 MAN2A1Q16706 1144 aa14.03□□□□□ -0.16
PRPF4-201ENST00000374198 TBC1D16Q8TBP0 767 aa14.03□□□□□ -0.16
PRPF4-201ENST00000374198 STK32AQ8WU08 396 aa14.03□□□□□ -0.16
PRPF4-201ENST00000374198 IFT43Q96FT9 208 aa14.03□□□□□ -0.16
PRPF4-201ENST00000374198 TRAPPC9Q96Q05 1148 aa14.03□□□□□ -0.16
PRPF4-201ENST00000374198 TRIM7Q9C029 511 aa14.03□□□□□ -0.16
PRPF4-201ENST00000374198 ASAP1Q9ULH1 1129 aa14.03□□□□□ -0.16
PRPF4-201ENST00000374198 ZSCAN9O15535 394 aaPredicted RBP14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms