RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 SPDYE6P0CI01 402 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 DDIT3P35638 169 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 UBE2SQ16763 222 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 MYLK4Q86YV6 388 aaPredicted RBP11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 CAPS2Q9BXY5 557 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 SLITRK6Q9H5Y7 841 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 MAN1B1Q9UKM7 699 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 PVALEFA0A1B0GWK0 134 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 CALB1P05937 261 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 TBXAS1P24557 533 aaPredicted RBP11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 CAPN12Q6ZSI9 719 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 CFAP61Q8NHU2 1237 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 MINPP1Q9UNW1 487 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 KCNH4Q9UQ05 1017 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 GFPT2O94808 682 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 SYNE4Q8N205 404 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 ZNF579Q8NAF0 562 aaKnown RBP11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 XXYLT1Q8NBI6 393 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 ACAP3Q96P50 834 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 INTS9Q9NV88 658 aaKnown RBP11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 STAP1Q9ULZ2 295 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 DENND3A2RUS2 1198 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 POC1B-GALNT4F8VUJ3 575 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 PMLP29590 882 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 RWDD2BP57060 319 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 BASP1P80723 227 aaKnown RBP11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 ALX1Q15699 326 aa11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 SMAP1Q8IYB5 467 aaPredicted RBP11.94□□□□□ -0.5
PHACTR4-202ENST00000373839 MT-ND3P03897 115 aa11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 IFNA8P32881 189 aa11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 PFKFB3Q16875 520 aaPredicted RBP11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 ZNF526Q8TF50 670 aaPredicted RBP11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 SMYD2Q9NRG4 433 aa11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 SASH1O94885 1247 aa11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 EIF3BP55884 814 aaKnown RBP11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 NR5A1Q13285 461 aa11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 TMTC4Q5T4D3 741 aa11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 TBC1D9BQ66K14 1250 aa11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 ANKRD13CQ8N6S4 541 aa11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 GANCQ8TET4 914 aa11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 MAGEB5Q9BZ81 275 aa11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 CNOT10Q9H9A5 744 aaKnown RBP11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 RNF181Q9P0P0 153 aa11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 KIAA0391O15091 583 aaKnown RBP11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 PPFIA2O75334 1257 aa11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 P4HBP07237 508 aaKnown RBP11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 FCER1AP12319 257 aa11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 PEX3P56589 373 aa11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 MUM1Q2TAK8 710 aa11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 FAM83BQ5T0W9 1011 aa11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 TWF2Q6IBS0 349 aaKnown RBP11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 NUDT18Q6ZVK8 323 aa11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 ADAT2Q7Z6V5 191 aaKnown RBP11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 PCGF5Q86SE9 256 aa11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 FAM133AQ8N9E0 248 aa11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 ORC6Q9Y5N6 252 aa11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 CCDC188H7C350 402 aa11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 CD58P19256 250 aa11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 EXOC4Q96A65 974 aa11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 GCOM2Q9BZD3 368 aaPredicted RBP11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 ZNF302Q9NR11 478 aa11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 ASNSD1Q9NWL6 643 aa11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 CTTNQ14247 550 aaKnown RBP11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 KLC2Q9H0B6 622 aa11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 HPCAL4Q9UM19 191 aa11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 FARP1Q9Y4F1 1045 aaPredicted RBP11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 JCADQ9P266 1359 aa11.93□□□□□ -0.5
PHACTR4-202ENST00000373839 USP17L15C9J2P7 530 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 USP17L13C9JLJ4 530 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 USP17L11C9JVI0 530 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 USP17L18D6R9N7 530 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 USP17L22D6RA61 530 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 USP17L17D6RBQ6 530 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 USP17L19D6RCP7 530 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 USP17L20D6RJB6 530 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 CYP27B1O15528 508 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 HOXA13P31271 388 aaPredicted RBP11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 RFC1P35251 1148 aaPredicted RBP11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 CACNB1Q02641 598 aaPredicted RBP11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 USP17L24Q0WX57 530 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 TKFCQ3LXA3 575 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 TBC1D10BQ4KMP7 808 aaPredicted RBP11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 ANKRD20A4Q4UJ75 823 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 ANKRD20A8PQ5CZ79 823 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 ANKRD20A2Q5SQ80 823 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 FAM182BQ5T319 152 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 ANKRD20A1Q5TYW2 823 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 RBM46Q8TBY0 533 aaKnown RBP11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 SH3RF3Q8TEJ3 882 aaPredicted RBP11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 SCG3Q8WXD2 468 aaKnown RBP11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 MTRQ99707 1265 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 TMEM47Q9BQJ4 181 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 IQANK1A0A1B0GTG1 560 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 TJP3O95049 919 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 TAC1P20366 129 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 MCAMP43121 646 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 OSTNP61366 133 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 NAA35Q5VZE5 725 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 PI16Q6UXB8 463 aa11.92□□□□□ -0.5
PHACTR4-202ENST00000373839 CENPUQ71F23 418 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms