RNA–Protein interactions for RNA: ENST00000373672.7

COL16A1-203, Transcript of collagen type XVI alpha 1 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL16A1, Length 5,736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-203ENST00000373672 LLGL1Q15334 1064 aa19.4■□□□□ 0.7
COL16A1-203ENST00000373672 BZW1Q7L1Q6 419 aaKnown RBP19.4■□□□□ 0.7
COL16A1-203ENST00000373672 PYROXD1Q8WU10 500 aa19.4■□□□□ 0.7
COL16A1-203ENST00000373672 DCAF4Q8WV16 495 aa19.4■□□□□ 0.7
COL16A1-203ENST00000373672 MRPL46Q9H2W6 279 aaKnown RBP19.4■□□□□ 0.7
COL16A1-203ENST00000373672 UBN1Q9NPG3 1134 aa19.4■□□□□ 0.7
COL16A1-203ENST00000373672 PACSIN2Q9UNF0 486 aaPredicted RBP19.4■□□□□ 0.7
COL16A1-203ENST00000373672 RPSAP08865 295 aaKnown RBP19.4■□□□□ 0.7
COL16A1-203ENST00000373672 ARL13BQ3SXY8 428 aa19.4■□□□□ 0.7
COL16A1-203ENST00000373672 SARM1Q6SZW1 724 aa19.4■□□□□ 0.7
COL16A1-203ENST00000373672 SCARA5Q6ZMJ2 495 aa19.4■□□□□ 0.7
COL16A1-203ENST00000373672 PDIK1LQ8N165 341 aa19.4■□□□□ 0.7
COL16A1-203ENST00000373672 PTCH1Q13635 1447 aa19.39■□□□□ 0.7
COL16A1-203ENST00000373672 OSTNP61366 133 aa19.39■□□□□ 0.7
COL16A1-203ENST00000373672 ESRRGP62508 458 aa19.39■□□□□ 0.7
COL16A1-203ENST00000373672 PDCD2Q16342 344 aaPredicted RBP19.39■□□□□ 0.7
COL16A1-203ENST00000373672 PDXDC2PQ6P474 469 aa19.39■□□□□ 0.7
COL16A1-203ENST00000373672 CALR3Q96L12 384 aaKnown RBP19.39■□□□□ 0.7
COL16A1-203ENST00000373672 TRPC5Q9UL62 973 aaPredicted RBP19.39■□□□□ 0.7
COL16A1-203ENST00000373672 CEP170Q5SW79 1584 aa19.39■□□□□ 0.69
COL16A1-203ENST00000373672 FRMD3A2A2Y4 597 aa19.39■□□□□ 0.69
COL16A1-203ENST00000373672 ANXA13P27216 316 aa19.39■□□□□ 0.69
COL16A1-203ENST00000373672 ART3Q13508 389 aa19.39■□□□□ 0.69
COL16A1-203ENST00000373672 ERICH1Q86X53 443 aa19.39■□□□□ 0.69
COL16A1-203ENST00000373672 SERPINI1Q99574 410 aa19.39■□□□□ 0.69
COL16A1-203ENST00000373672 CEP72Q9P209 647 aa19.39■□□□□ 0.69
COL16A1-203ENST00000373672 GOLGA8IPA6NC78 632 aa19.39■□□□□ 0.69
COL16A1-203ENST00000373672 GOLGA8JA6NMD2 632 aa19.39■□□□□ 0.69
COL16A1-203ENST00000373672 LDHAP00338 332 aaKnown RBP19.39■□□□□ 0.69
COL16A1-203ENST00000373672 SLC4A1P02730 911 aa19.39■□□□□ 0.69
COL16A1-203ENST00000373672 SLC12A1Q13621 1099 aa19.39■□□□□ 0.69
COL16A1-203ENST00000373672 FOXP4Q8IVH2 680 aaPredicted RBP19.39■□□□□ 0.69
COL16A1-203ENST00000373672 GINM1Q9NU53 330 aa19.39■□□□□ 0.69
COL16A1-203ENST00000373672 STK36Q9NRP7 1315 aa19.39■□□□□ 0.69
COL16A1-203ENST00000373672 VGLL3A8MV65 326 aa19.39■□□□□ 0.69
COL16A1-203ENST00000373672 PODXLO00592 558 aa19.39■□□□□ 0.69
COL16A1-203ENST00000373672 JAK3P52333 1124 aa19.39■□□□□ 0.69
COL16A1-203ENST00000373672 LCMT1Q9UIC8 334 aa19.39■□□□□ 0.69
COL16A1-203ENST00000373672 PEX19P40855 299 aa19.38■□□□□ 0.69
COL16A1-203ENST00000373672 E2F5Q15329 346 aa19.38■□□□□ 0.69
COL16A1-203ENST00000373672 RNF207Q6ZRF8 634 aa19.38■□□□□ 0.69
COL16A1-203ENST00000373672 CXorf38Q8TB03 319 aa19.38■□□□□ 0.69
COL16A1-203ENST00000373672 MYO5CQ9NQX4 1742 aa19.38■□□□□ 0.69
COL16A1-203ENST00000373672 FGGP02679 453 aa19.38■□□□□ 0.69
COL16A1-203ENST00000373672 ATP1A3P13637 1013 aa19.38■□□□□ 0.69
COL16A1-203ENST00000373672 HOXA13P31271 388 aaPredicted RBP19.38■□□□□ 0.69
COL16A1-203ENST00000373672 CCDC124Q96CT7 223 aaKnown RBP19.38■□□□□ 0.69
COL16A1-203ENST00000373672 TJP3O95049 919 aa19.38■□□□□ 0.69
COL16A1-203ENST00000373672 Q3C1V9 767 aa19.38■□□□□ 0.69
COL16A1-203ENST00000373672 ZNF579Q8NAF0 562 aaKnown RBP19.38■□□□□ 0.69
COL16A1-203ENST00000373672 BHMT2Q9H2M3 363 aa19.38■□□□□ 0.69
COL16A1-203ENST00000373672 PSMA2P25787 234 aa19.38■□□□□ 0.69
COL16A1-203ENST00000373672 KLC3Q6P597 504 aa19.38■□□□□ 0.69
COL16A1-203ENST00000373672 NFU1Q9UMS0 254 aa19.38■□□□□ 0.69
COL16A1-203ENST00000373672 SIRT2Q8IXJ6 389 aa19.38■□□□□ 0.69
COL16A1-203ENST00000373672 DHX38Q92620 1227 aaKnown RBP19.38■□□□□ 0.69
COL16A1-203ENST00000373672 NCF2P19878 526 aaPredicted RBP19.37■□□□□ 0.69
COL16A1-203ENST00000373672 EP400NLQ6ZTU2 488 aa19.37■□□□□ 0.69
COL16A1-203ENST00000373672 STRBPQ96SI9 672 aaKnown RBP19.37■□□□□ 0.69
COL16A1-203ENST00000373672 ZWILCHQ9H900 591 aa19.37■□□□□ 0.69
COL16A1-203ENST00000373672 CPSF1Q10570 1443 aaKnown RBP19.37■□□□□ 0.69
COL16A1-203ENST00000373672 MAPK13O15264 365 aa19.37■□□□□ 0.69
COL16A1-203ENST00000373672 RNF139Q8WU17 664 aa19.37■□□□□ 0.69
COL16A1-203ENST00000373672 COA1Q9GZY4 146 aa19.37■□□□□ 0.69
COL16A1-203ENST00000373672 ADAMTS1Q9UHI8 967 aa19.37■□□□□ 0.69
COL16A1-203ENST00000373672 APOEP02649 317 aa19.37■□□□□ 0.69
COL16A1-203ENST00000373672 ESRRAP11474 423 aaPredicted RBP19.37■□□□□ 0.69
COL16A1-203ENST00000373672 CA4P22748 312 aa19.37■□□□□ 0.69
COL16A1-203ENST00000373672 ARHGEF6Q15052 776 aa19.37■□□□□ 0.69
COL16A1-203ENST00000373672 PARD3BQ8TEW8 1205 aa19.37■□□□□ 0.69
COL16A1-203ENST00000373672 HSPH1Q92598 858 aa19.37■□□□□ 0.69
COL16A1-203ENST00000373672 XAB2Q9HCS7 855 aaKnown RBP19.37■□□□□ 0.69
COL16A1-203ENST00000373672 FGFR1OP2Q9NVK5 253 aa19.37■□□□□ 0.69
COL16A1-203ENST00000373672 SCOCQ9UIL1 159 aa19.37■□□□□ 0.69
COL16A1-203ENST00000373672 WDR91A4D1P6 747 aa19.37■□□□□ 0.69
COL16A1-203ENST00000373672 SPDYE2BA6NHP3 402 aa19.37■□□□□ 0.69
COL16A1-203ENST00000373672 K7ERI5 159 aa19.37■□□□□ 0.69
COL16A1-203ENST00000373672 SPDYE6P0CI01 402 aa19.37■□□□□ 0.69
COL16A1-203ENST00000373672 TMEM179Q6ZVK1 233 aa19.37■□□□□ 0.69
COL16A1-203ENST00000373672 SYNGAP1Q96PV0 1343 aa19.36■□□□□ 0.69
COL16A1-203ENST00000373672 TAF11Q15544 211 aa19.36■□□□□ 0.69
COL16A1-203ENST00000373672 MAML1Q92585 1016 aa19.36■□□□□ 0.69
COL16A1-203ENST00000373672 FGD4Q96M96 766 aa19.36■□□□□ 0.69
COL16A1-203ENST00000373672 PLAAQ9Y263 795 aa19.36■□□□□ 0.69
COL16A1-203ENST00000373672 MIF4GDA9UHW6 222 aaKnown RBP19.36■□□□□ 0.69
COL16A1-203ENST00000373672 H7C1W4 665 aa19.36■□□□□ 0.69
COL16A1-203ENST00000373672 CHEK2O96017 543 aa19.36■□□□□ 0.69
COL16A1-203ENST00000373672 EIF2AK2P19525 551 aaKnown RBP19.36■□□□□ 0.69
COL16A1-203ENST00000373672 PROM2Q8N271 834 aa19.36■□□□□ 0.69
COL16A1-203ENST00000373672 CCDC138Q96M89 665 aa19.36■□□□□ 0.69
COL16A1-203ENST00000373672 MXD3Q9BW11 206 aa19.36■□□□□ 0.69
COL16A1-203ENST00000373672 DNAJC12Q9UKB3 198 aa19.36■□□□□ 0.69
COL16A1-203ENST00000373672 ERBB3P21860 1342 aa19.36■□□□□ 0.69
COL16A1-203ENST00000373672 WDR64B1ANS9 1081 aa19.36■□□□□ 0.69
COL16A1-203ENST00000373672 SKIP12755 728 aa19.36■□□□□ 0.69
COL16A1-203ENST00000373672 MCAMP43121 646 aa19.36■□□□□ 0.69
COL16A1-203ENST00000373672 KRT39Q6A163 491 aa19.36■□□□□ 0.69
COL16A1-203ENST00000373672 TMED8Q6PL24 325 aaPredicted RBP19.36■□□□□ 0.69
COL16A1-203ENST00000373672 TTLL11Q8NHH1 800 aa19.36■□□□□ 0.69
COL16A1-203ENST00000373672 FAF2Q96CS3 445 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms