RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 BNIP1Q12981 228 aa11.53□□□□□ -0.56
TRERF1-203ENST00000372917 CCDC153Q494R4 210 aa11.53□□□□□ -0.56
TRERF1-203ENST00000372917 PIGWQ7Z7B1 504 aa11.53□□□□□ -0.56
TRERF1-203ENST00000372917 VSIG1Q86XK7 387 aa11.53□□□□□ -0.56
TRERF1-203ENST00000372917 LRRC59Q96AG4 307 aaKnown RBP11.53□□□□□ -0.56
TRERF1-203ENST00000372917 PHF12Q96QT6 1004 aa11.53□□□□□ -0.56
TRERF1-203ENST00000372917 NCK2O43639 380 aa11.52□□□□□ -0.56
TRERF1-203ENST00000372917 LDHCP07864 332 aa11.52□□□□□ -0.56
TRERF1-203ENST00000372917 TCF7P36402 384 aaPredicted RBP11.52□□□□□ -0.56
TRERF1-203ENST00000372917 SAFBQ15424 915 aaKnown RBP eCLIP11.52□□□□□ -0.56
TRERF1-203ENST00000372917 ZCWPW2Q504Y3 356 aa11.52□□□□□ -0.56
TRERF1-203ENST00000372917 C1orf228Q6PIY5 440 aa11.52□□□□□ -0.56
TRERF1-203ENST00000372917 KLHL7Q8IXQ5 586 aa11.52□□□□□ -0.56
TRERF1-203ENST00000372917 TUBGCP5Q96RT8 1024 aa11.52□□□□□ -0.56
TRERF1-203ENST00000372917 SEC63Q9UGP8 760 aaKnown RBP11.52□□□□□ -0.56
TRERF1-203ENST00000372917 USP15Q9Y4E8 981 aaPredicted RBP11.52□□□□□ -0.56
TRERF1-203ENST00000372917 A0A1W2PQ67 120 aa11.52□□□□□ -0.57
TRERF1-203ENST00000372917 S100A1P23297 94 aa11.52□□□□□ -0.57
TRERF1-203ENST00000372917 RXRGP48443 463 aa11.52□□□□□ -0.57
TRERF1-203ENST00000372917 ITIH3Q06033 890 aa11.52□□□□□ -0.57
TRERF1-203ENST00000372917 KCTD19Q17RG1 926 aaPredicted RBP11.52□□□□□ -0.57
TRERF1-203ENST00000372917 EAPPQ56P03 285 aaPredicted RBP11.52□□□□□ -0.57
TRERF1-203ENST00000372917 GRAMD1CQ8IYS0 662 aa11.52□□□□□ -0.57
TRERF1-203ENST00000372917 GDAP1Q8TB36 358 aa11.52□□□□□ -0.57
TRERF1-203ENST00000372917 NCSTNQ92542 709 aa11.52□□□□□ -0.57
TRERF1-203ENST00000372917 LRRC45Q96CN5 670 aa11.52□□□□□ -0.57
TRERF1-203ENST00000372917 ADD3Q9UEY8 706 aaKnown RBP11.52□□□□□ -0.57
TRERF1-203ENST00000372917 RBMX2Q9Y388 322 aaKnown RBP11.52□□□□□ -0.57
TRERF1-203ENST00000372917 NEO1Q92859 1461 aa11.52□□□□□ -0.57
TRERF1-203ENST00000372917 A0A0D9SFI3 127 aa11.52□□□□□ -0.57
TRERF1-203ENST00000372917 LYNP07948 512 aa11.52□□□□□ -0.57
TRERF1-203ENST00000372917 PLS1Q14651 629 aa11.52□□□□□ -0.57
TRERF1-203ENST00000372917 KPNB1Q14974 876 aaKnown RBP11.52□□□□□ -0.57
TRERF1-203ENST00000372917 CYTH1Q15438 398 aa11.52□□□□□ -0.57
TRERF1-203ENST00000372917 TMEM259Q4ZIN3 620 aa11.52□□□□□ -0.57
TRERF1-203ENST00000372917 CMPK2Q5EBM0 449 aa11.52□□□□□ -0.57
TRERF1-203ENST00000372917 LRIG3Q6UXM1 1119 aa11.52□□□□□ -0.57
TRERF1-203ENST00000372917 ST13P4Q8IZP2 240 aaPredicted RBP11.52□□□□□ -0.57
TRERF1-203ENST00000372917 LRRC43Q8N309 656 aa11.52□□□□□ -0.57
TRERF1-203ENST00000372917 C1orf131Q8NDD1 294 aaKnown RBP11.52□□□□□ -0.57
TRERF1-203ENST00000372917 MGARPQ8TDB4 240 aa11.52□□□□□ -0.57
TRERF1-203ENST00000372917 TPK1Q9H3S4 243 aa11.52□□□□□ -0.57
TRERF1-203ENST00000372917 KCNQ3O43525 872 aa11.51□□□□□ -0.57
TRERF1-203ENST00000372917 ANO5Q75V66 913 aa11.51□□□□□ -0.57
TRERF1-203ENST00000372917 DTX3LQ8TDB6 740 aa11.51□□□□□ -0.57
TRERF1-203ENST00000372917 ZNF317Q96PQ6 595 aaPredicted RBP11.51□□□□□ -0.57
TRERF1-203ENST00000372917 CEP44Q9C0F1 390 aa11.51□□□□□ -0.57
TRERF1-203ENST00000372917 POLR3EQ9NVU0 708 aa11.51□□□□□ -0.57
TRERF1-203ENST00000372917 TAB2Q9NYJ8 693 aa11.51□□□□□ -0.57
TRERF1-203ENST00000372917 KCNH3Q9ULD8 1083 aa11.51□□□□□ -0.57
TRERF1-203ENST00000372917 HYOU1Q9Y4L1 999 aa11.51□□□□□ -0.57
TRERF1-203ENST00000372917 IARSP41252 1262 aaKnown RBP11.51□□□□□ -0.57
TRERF1-203ENST00000372917 SYT2Q8N9I0 419 aaPredicted RBP11.51□□□□□ -0.57
TRERF1-203ENST00000372917 FBXO41Q8TF61 875 aa11.51□□□□□ -0.57
TRERF1-203ENST00000372917 TMEM237Q96Q45 408 aa11.51□□□□□ -0.57
TRERF1-203ENST00000372917 MTFR1LQ9H019 292 aa11.51□□□□□ -0.57
TRERF1-203ENST00000372917 TRIM17Q9Y577 477 aa11.51□□□□□ -0.57
TRERF1-203ENST00000372917 SIGLEC1Q9BZZ2 1709 aa11.51□□□□□ -0.57
TRERF1-203ENST00000372917 A0A087WZG4 1122 aa11.51□□□□□ -0.57
TRERF1-203ENST00000372917 SFI1A8K8P3 1242 aa11.51□□□□□ -0.57
TRERF1-203ENST00000372917 MGEA5O60502 916 aa11.51□□□□□ -0.57
TRERF1-203ENST00000372917 VDRP11473 427 aa11.51□□□□□ -0.57
TRERF1-203ENST00000372917 CYLC1P35663 651 aaPredicted RBP11.51□□□□□ -0.57
TRERF1-203ENST00000372917 DCTN2Q13561 401 aaKnown RBP11.51□□□□□ -0.57
TRERF1-203ENST00000372917 AGBL2Q5U5Z8 902 aa11.51□□□□□ -0.57
TRERF1-203ENST00000372917 NEK10Q6ZWH5 1172 aa11.51□□□□□ -0.57
TRERF1-203ENST00000372917 UBE2Q1Q7Z7E8 422 aa11.51□□□□□ -0.57
TRERF1-203ENST00000372917 MREGQ8N565 214 aa11.51□□□□□ -0.57
TRERF1-203ENST00000372917 ANKK1Q8NFD2 765 aa11.51□□□□□ -0.57
TRERF1-203ENST00000372917 IL17REQ8NFR9 667 aa11.51□□□□□ -0.57
TRERF1-203ENST00000372917 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.51□□□□□ -0.57
TRERF1-203ENST00000372917 PBKQ96KB5 322 aa11.51□□□□□ -0.57
TRERF1-203ENST00000372917 NRDE2Q9H7Z3 1164 aa11.51□□□□□ -0.57
TRERF1-203ENST00000372917 TRPC7Q9HCX4 862 aa11.51□□□□□ -0.57
TRERF1-203ENST00000372917 GJB4Q9NTQ9 266 aa11.51□□□□□ -0.57
TRERF1-203ENST00000372917 PCDH11XQ9BZA7 1347 aa11.5□□□□□ -0.57
TRERF1-203ENST00000372917 RCCD1A6NED2 376 aa11.5□□□□□ -0.57
TRERF1-203ENST00000372917 GRM8O00222 908 aa11.5□□□□□ -0.57
TRERF1-203ENST00000372917 MAP3K7O43318 606 aa11.5□□□□□ -0.57
TRERF1-203ENST00000372917 COL6A2P12110 1019 aa11.5□□□□□ -0.57
TRERF1-203ENST00000372917 TCP1P17987 556 aaKnown RBP11.5□□□□□ -0.57
TRERF1-203ENST00000372917 FAM117BQ6P1L5 589 aa11.5□□□□□ -0.57
TRERF1-203ENST00000372917 MARK2Q7KZI7 788 aaKnown RBP11.5□□□□□ -0.57
TRERF1-203ENST00000372917 TLR7Q9NYK1 1049 aaKnown RBP11.5□□□□□ -0.57
TRERF1-203ENST00000372917 FBXL5Q9UKA1 691 aa11.5□□□□□ -0.57
TRERF1-203ENST00000372917 MTUS1Q9ULD2 1270 aa11.5□□□□□ -0.57
TRERF1-203ENST00000372917 FADS3Q9Y5Q0 445 aa11.5□□□□□ -0.57
TRERF1-203ENST00000372917 TMEM131LA2VDJ0 1609 aa11.5□□□□□ -0.57
TRERF1-203ENST00000372917 DKC1O60832 514 aaKnown RBP eCLIP11.5□□□□□ -0.57
TRERF1-203ENST00000372917 MOCS3O95396 460 aa11.5□□□□□ -0.57
TRERF1-203ENST00000372917 HOXB7P09629 217 aa11.5□□□□□ -0.57
TRERF1-203ENST00000372917 GM2AP17900 193 aa11.5□□□□□ -0.57
TRERF1-203ENST00000372917 TNFRSF8P28908 595 aa11.5□□□□□ -0.57
TRERF1-203ENST00000372917 CYP4A11Q02928 519 aa11.5□□□□□ -0.57
TRERF1-203ENST00000372917 CCDC152Q4G0S7 254 aa11.5□□□□□ -0.57
TRERF1-203ENST00000372917 VWA3BQ502W6 1294 aa11.5□□□□□ -0.57
TRERF1-203ENST00000372917 TTC30BQ8N4P2 665 aa11.5□□□□□ -0.57
TRERF1-203ENST00000372917 FAM13CQ8NE31 585 aa11.5□□□□□ -0.57
TRERF1-203ENST00000372917 ARHGEF2Q92974 986 aaKnown RBP11.5□□□□□ -0.57
TRERF1-203ENST00000372917 GDF3Q9NR23 364 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms