RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 DRD4P21917 467 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 YY1P25490 414 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 LONP1P36776 959 aaKnown RBP5.93□□□□□ -1.46
ATG4A-204ENST00000372246 ERFP50548 548 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 KCNB1Q14721 858 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 FAM83BQ5T0W9 1011 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 LRCH2Q5VUJ6 765 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 TLDC1Q6P9B6 456 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 LRRC34Q8IZ02 419 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 CACNA2D3Q8IZS8 1091 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 METTL13Q8N6R0 699 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 USP38Q8NB14 1042 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 CCT6BQ92526 530 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 ZNF516Q92618 1163 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 ERGIC2Q96RQ1 377 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 PRMT1Q99873 361 aaKnown RBP5.93□□□□□ -1.46
ATG4A-204ENST00000372246 YIPF3Q9GZM5 350 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 OSGEPQ9NPF4 335 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 KCNQ5Q9NR82 932 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 DBR1Q9UK59 544 aaKnown RBP5.93□□□□□ -1.46
ATG4A-204ENST00000372246 COL1A1P02452 1464 aaPredicted RBP5.93□□□□□ -1.46
ATG4A-204ENST00000372246 SCN11AQ9UI33 1791 aa5.93□□□□□ -1.46
ATG4A-204ENST00000372246 GOLGA6L10A6NI86 522 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 TRAF5O00463 557 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 RTN2O75298 545 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 ANP32DO95626 131 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 UQCRFS1P1P0C7P4 283 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 GCKP35557 465 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 EIF6P56537 245 aaKnown RBP5.92□□□□□ -1.46
ATG4A-204ENST00000372246 TFAP4Q01664 338 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 PTK2Q05397 1052 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 CHD4Q14839 1912 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 FAM182AQ5T1J6 154 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 THEMIS2Q5TEJ8 643 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 MEI1Q5TIA1 1274 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 SPTY2D1Q68D10 685 aaPredicted RBP5.92□□□□□ -1.46
ATG4A-204ENST00000372246 MSL1Q68DK7 614 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 USP17L2Q6R6M4 530 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 BICDL1Q6ZP65 573 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 TSHZ1Q6ZSZ6 1077 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 FAM47EQ6ZV65 393 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 ERICH1Q86X53 443 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 ZSCAN29Q8IWY8 852 aaPredicted RBP5.92□□□□□ -1.46
ATG4A-204ENST00000372246 TMTC2Q8N394 836 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 RNF217Q8TC41 542 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 EPS8L3Q8TE67 593 aaKnown RBP5.92□□□□□ -1.46
ATG4A-204ENST00000372246 SH3RF3Q8TEJ3 882 aaPredicted RBP5.92□□□□□ -1.46
ATG4A-204ENST00000372246 ELMO3Q96BJ8 720 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 GPR101Q96P66 508 aaPredicted RBP5.92□□□□□ -1.46
ATG4A-204ENST00000372246 TAF1DQ9H5J8 278 aaPredicted RBP5.92□□□□□ -1.46
ATG4A-204ENST00000372246 ERVK-5Q9HDB9 667 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 BLOC1S4Q9NUP1 217 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 RTL9Q8NET4 1388 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 KRIT1O00522 736 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 C21orf2O43822 256 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 KIF4AO95239 1232 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 VIMP08670 466 aaKnown RBP5.92□□□□□ -1.46
ATG4A-204ENST00000372246 ABCB4P21439 1286 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 FGFR4P22455 802 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 HSPA9P38646 679 aaKnown RBP5.92□□□□□ -1.46
ATG4A-204ENST00000372246 PPP2R2AP63151 447 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 MAP2K5Q13163 448 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 GRB10Q13322 594 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 GRIK5Q16478 980 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 TRIM68Q6AZZ1 485 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 LRRC55Q6ZSA7 311 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 MICALCLQ6ZW33 695 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 ZNF572Q7Z3I7 529 aaPredicted RBP5.92□□□□□ -1.46
ATG4A-204ENST00000372246 ZNF571Q7Z3V5 609 aaPredicted RBP5.92□□□□□ -1.46
ATG4A-204ENST00000372246 TAX1BP1Q86VP1 789 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 TXNRD3Q86VQ6 643 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 MICAL1Q8TDZ2 1067 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 PWWP2AQ96N64 755 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 PNMA5Q96PV4 448 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 POP1Q99575 1024 aaKnown RBP5.92□□□□□ -1.46
ATG4A-204ENST00000372246 TSGA10Q9BZW7 698 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 RNF41Q9H4P4 317 aaPredicted RBP5.92□□□□□ -1.46
ATG4A-204ENST00000372246 AZI2Q9H6S1 392 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 IL21Q9HBE4 155 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 RBM28Q9NW13 759 aaKnown RBP5.92□□□□□ -1.46
ATG4A-204ENST00000372246 TMOD3Q9NYL9 352 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 ZMYND8Q9ULU4 1186 aaPredicted RBP5.92□□□□□ -1.46
ATG4A-204ENST00000372246 PCDHA4Q9UN74 947 aa5.92□□□□□ -1.46
ATG4A-204ENST00000372246 NOC2LQ9Y3T9 749 aaKnown RBP5.92□□□□□ -1.46
ATG4A-204ENST00000372246 SLIT2O94813 1529 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 TMEM94Q12767 1356 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 MYH7P12883 1935 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 HMGB1P1B2RPK0 211 aaPredicted RBP5.91□□□□□ -1.46
ATG4A-204ENST00000372246 PDE8AO60658 829 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 LRRN2O75325 713 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 UBOX5O94941 541 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 MMEP08473 750 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 EZRP15311 586 aaKnown RBP5.91□□□□□ -1.46
ATG4A-204ENST00000372246 TAL1P17542 331 aaPredicted RBP5.91□□□□□ -1.46
ATG4A-204ENST00000372246 TUBP50607 506 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 CASP5P51878 434 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 PLTPP55058 493 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 IFFO1Q0D2I5 559 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 KLHL30Q0D2K2 578 aa5.91□□□□□ -1.46
ATG4A-204ENST00000372246 NAB2Q15742 525 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms