RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 MEIS2O14770 477 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 RAD21O60216 631 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 PLA2G6O60733 806 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 SLU7O95391 586 aaKnown RBP15.62■□□□□ 0.09
LDB3-204ENST00000372066 GYPCP04921 128 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 ERCC3P19447 782 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 Q4G0T1 1027 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 KIAA1755Q5JYT7 1200 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 HAUS3Q68CZ6 603 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 SAMD1Q6SPF0 538 aaPredicted RBP15.62■□□□□ 0.09
LDB3-204ENST00000372066 Q7L0L9 218 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 IRF2BP1Q8IU81 584 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 GUF1Q8N442 669 aaKnown RBP15.62■□□□□ 0.09
LDB3-204ENST00000372066 CSGALNACT2Q8N6G5 542 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 RETREG2Q8NC44 543 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 TRPV1Q8NER1 839 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 CRYGNQ8WXF5 182 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 KCNMB3Q9NPA1 279 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 PIK3CDO00329 1044 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 FLOT1O75955 427 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 DSG3P32926 999 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 CIITAP33076 1130 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 SREBF1P36956 1147 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 LRRC63Q05C16 580 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 GOLGA8FQ08AF8 430 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 GOLGA8DPQ0D2H9 430 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 IKQ13123 557 aaPredicted RBP15.62■□□□□ 0.09
LDB3-204ENST00000372066 MCM6Q14566 821 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 CENPPQ6IPU0 288 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 SYT10Q6XYQ8 523 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 NCAPG2Q86XI2 1143 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 SPICE1Q8N0Z3 855 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 MB21D1Q8N884 522 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 SHCBP1Q8NEM2 672 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 DUSP9Q99956 384 aaKnown RBP15.62■□□□□ 0.09
LDB3-204ENST00000372066 LBHD1Q9BQE6 289 aaPredicted RBP15.62■□□□□ 0.09
LDB3-204ENST00000372066 NUP58Q9BVL2 599 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 VPS16Q9H269 839 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 BMP2KQ9NSY1 1161 aaPredicted RBP15.62■□□□□ 0.09
LDB3-204ENST00000372066 MAPK8IP1Q9UQF2 711 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 TMX2Q9Y320 296 aa15.62■□□□□ 0.09
LDB3-204ENST00000372066 LAMA3Q16787 3333 aa15.61■□□□□ 0.09
LDB3-204ENST00000372066 ALPK3Q96L96 1907 aa15.61■□□□□ 0.09
LDB3-204ENST00000372066 TRIM49BA6NDI0 452 aa15.61■□□□□ 0.09
LDB3-204ENST00000372066 MYMKA6NI61 221 aa15.61■□□□□ 0.09
LDB3-204ENST00000372066 SPDYE3A6NKU9 549 aa15.61■□□□□ 0.09
LDB3-204ENST00000372066 DNM1LO00429 736 aa15.61■□□□□ 0.09
LDB3-204ENST00000372066 DLL1O00548 723 aa15.61■□□□□ 0.09
LDB3-204ENST00000372066 COBLO75128 1261 aa15.61■□□□□ 0.09
LDB3-204ENST00000372066 CASP14P31944 242 aa15.61■□□□□ 0.09
LDB3-204ENST00000372066 STAT2P52630 851 aa15.61■□□□□ 0.09
LDB3-204ENST00000372066 ARHGAP4P98171 946 aa15.61■□□□□ 0.09
LDB3-204ENST00000372066 UBXN1Q04323 297 aa15.61■□□□□ 0.09
LDB3-204ENST00000372066 GJC2Q5T442 439 aaPredicted RBP15.61■□□□□ 0.09
LDB3-204ENST00000372066 OLFML2BQ68BL8 750 aa15.61■□□□□ 0.09
LDB3-204ENST00000372066 TRIM65Q6PJ69 517 aa15.61■□□□□ 0.09
LDB3-204ENST00000372066 ARRDC4Q8NCT1 418 aa15.61■□□□□ 0.09
LDB3-204ENST00000372066 ERMNQ8TAM6 284 aa15.61■□□□□ 0.09
LDB3-204ENST00000372066 FAM20AQ96MK3 541 aa15.61■□□□□ 0.09
LDB3-204ENST00000372066 ABHD10Q9NUJ1 306 aa15.61■□□□□ 0.09
LDB3-204ENST00000372066 SLC5A4Q9NY91 659 aa15.61■□□□□ 0.09
LDB3-204ENST00000372066 IGHA2P01877 340 aa15.6■□□□□ 0.09
LDB3-204ENST00000372066 MYCNP04198 464 aaPredicted RBP15.6■□□□□ 0.09
LDB3-204ENST00000372066 CYP3A4P08684 503 aa15.6■□□□□ 0.09
LDB3-204ENST00000372066 CYBAP13498 195 aa15.6■□□□□ 0.09
LDB3-204ENST00000372066 PMS1P54277 932 aaKnown RBP15.6■□□□□ 0.09
LDB3-204ENST00000372066 RBM10P98175 930 aaKnown RBP15.6■□□□□ 0.09
LDB3-204ENST00000372066 EHHADHQ08426 723 aa15.6■□□□□ 0.09
LDB3-204ENST00000372066 STK4Q13043 487 aa15.6■□□□□ 0.09
LDB3-204ENST00000372066 PTPN21Q16825 1174 aa15.6■□□□□ 0.09
LDB3-204ENST00000372066 USP17L6PQ6QN14 398 aa15.6■□□□□ 0.09
LDB3-204ENST00000372066 CYP26C1Q6V0L0 522 aa15.6■□□□□ 0.09
LDB3-204ENST00000372066 FAM160B2Q86V87 743 aa15.6■□□□□ 0.09
LDB3-204ENST00000372066 KIAA0895Q8NCT3 520 aa15.6■□□□□ 0.09
LDB3-204ENST00000372066 ZNF507Q8TCN5 953 aa15.6■□□□□ 0.09
LDB3-204ENST00000372066 CHURC1Q8WUH1 139 aa15.6■□□□□ 0.09
LDB3-204ENST00000372066 ATG4CQ96DT6 458 aa15.6■□□□□ 0.09
LDB3-204ENST00000372066 NUP88Q99567 741 aaPredicted RBP15.6■□□□□ 0.09
LDB3-204ENST00000372066 MROH8Q9H579 483 aa15.6■□□□□ 0.09
LDB3-204ENST00000372066 VCPKMTQ9H867 229 aa15.6■□□□□ 0.09
LDB3-204ENST00000372066 EHMT1Q9H9B1 1298 aa15.6■□□□□ 0.09
LDB3-204ENST00000372066 PRKAG2Q9UGJ0 569 aa15.6■□□□□ 0.09
LDB3-204ENST00000372066 KIF20AO95235 890 aa15.59■□□□□ 0.09
LDB3-204ENST00000372066 FIGNQ5HY92 759 aa15.59■□□□□ 0.09
LDB3-204ENST00000372066 PRAMEF19Q5SWL8 479 aa15.59■□□□□ 0.09
LDB3-204ENST00000372066 ZNF710Q8N1W2 664 aa15.59■□□□□ 0.09
LDB3-204ENST00000372066 CNOT6LQ96LI5 555 aaKnown RBP15.59■□□□□ 0.09
LDB3-204ENST00000372066 TSG101Q99816 390 aa15.59■□□□□ 0.09
LDB3-204ENST00000372066 TUBGCP2Q9BSJ2 902 aa15.59■□□□□ 0.09
LDB3-204ENST00000372066 MTMR10Q9NXD2 777 aa15.59■□□□□ 0.09
LDB3-204ENST00000372066 DNAI1Q9UI46 699 aa15.59■□□□□ 0.09
LDB3-204ENST00000372066 PRR12Q9ULL5 1215 aa15.59■□□□□ 0.09
LDB3-204ENST00000372066 RTP1P59025 263 aa15.58■□□□□ 0.09
LDB3-204ENST00000372066 NCBP1Q09161 790 aaKnown RBP15.58■□□□□ 0.09
LDB3-204ENST00000372066 ANKRD40Q6AI12 368 aa15.58■□□□□ 0.09
LDB3-204ENST00000372066 TOGARAM2Q6ZUX3 1019 aa15.58■□□□□ 0.09
LDB3-204ENST00000372066 CCDC65Q8IXS2 484 aa15.58■□□□□ 0.09
LDB3-204ENST00000372066 ABRAQ8N0Z2 381 aa15.58■□□□□ 0.09
LDB3-204ENST00000372066 ETNPPLQ8TBG4 499 aa15.58■□□□□ 0.09
LDB3-204ENST00000372066 DDX12PQ92771 950 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms