RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 MAN1A2O60476 641 aa13.65□□□□□ -0.22
GPC4-201ENST00000370828 PLEKHA8P1O95397 391 aa13.65□□□□□ -0.22
GPC4-201ENST00000370828 S100BP04271 92 aaPredicted RBP13.65□□□□□ -0.22
GPC4-201ENST00000370828 YY1P25490 414 aa13.65□□□□□ -0.22
GPC4-201ENST00000370828 NSFP46459 744 aaKnown RBP13.65□□□□□ -0.22
GPC4-201ENST00000370828 CYB5R4Q7L1T6 521 aa13.65□□□□□ -0.22
GPC4-201ENST00000370828 TRIM56Q9BRZ2 755 aaKnown RBP13.65□□□□□ -0.22
GPC4-201ENST00000370828 SAYSD1Q9NPB0 183 aa13.65□□□□□ -0.22
GPC4-201ENST00000370828 SSX2IPQ9Y2D8 614 aa13.65□□□□□ -0.22
GPC4-201ENST00000370828 MROH5Q6ZUA9 1318 aa13.65□□□□□ -0.22
GPC4-201ENST00000370828 LMNB2Q03252 620 aa13.65□□□□□ -0.22
GPC4-201ENST00000370828 BBS9Q3SYG4 887 aa13.65□□□□□ -0.22
GPC4-201ENST00000370828 TRIM65Q6PJ69 517 aa13.65□□□□□ -0.22
GPC4-201ENST00000370828 ENAHQ8N8S7 591 aaPredicted RBP13.65□□□□□ -0.22
GPC4-201ENST00000370828 SUPT20HQ8NEM7 779 aa13.65□□□□□ -0.22
GPC4-201ENST00000370828 ZNF483Q8TF39 744 aaPredicted RBP13.65□□□□□ -0.22
GPC4-201ENST00000370828 SEPT8Q92599 483 aa13.65□□□□□ -0.22
GPC4-201ENST00000370828 RUBCNQ92622 972 aa13.65□□□□□ -0.22
GPC4-201ENST00000370828 CASP10Q92851 521 aa13.65□□□□□ -0.22
GPC4-201ENST00000370828 EMILIN3Q9NT22 766 aa13.65□□□□□ -0.22
GPC4-201ENST00000370828 CEP72Q9P209 647 aa13.65□□□□□ -0.22
GPC4-201ENST00000370828 MROH7-TTC4A0A0A0MT08 1334 aa13.65□□□□□ -0.23
GPC4-201ENST00000370828 PRPF3O43395 683 aaKnown RBP13.64□□□□□ -0.23
GPC4-201ENST00000370828 SAT1P21673 171 aa13.64□□□□□ -0.23
GPC4-201ENST00000370828 NOP14P78316 857 aaKnown RBP13.64□□□□□ -0.23
GPC4-201ENST00000370828 LRRC63Q05C16 580 aa13.64□□□□□ -0.23
GPC4-201ENST00000370828 LRRC36Q1X8D7 754 aa13.64□□□□□ -0.23
GPC4-201ENST00000370828 KDM7AQ6ZMT4 941 aa13.64□□□□□ -0.23
GPC4-201ENST00000370828 TBC1D10CQ8IV04 446 aa13.64□□□□□ -0.23
GPC4-201ENST00000370828 SETDB2Q96T68 719 aa13.64□□□□□ -0.23
GPC4-201ENST00000370828 ATP8A2Q9NTI2 1148 aa13.64□□□□□ -0.23
GPC4-201ENST00000370828 AK9Q5TCS8 1911 aa13.64□□□□□ -0.23
GPC4-201ENST00000370828 TTI1O43156 1089 aa13.64□□□□□ -0.23
GPC4-201ENST00000370828 TFRCP02786 760 aaKnown RBP13.64□□□□□ -0.23
GPC4-201ENST00000370828 UBTFL6P0CB48 400 aaPredicted RBP13.64□□□□□ -0.23
GPC4-201ENST00000370828 EEF1B2P24534 225 aaKnown RBP13.64□□□□□ -0.23
GPC4-201ENST00000370828 ATICP31939 592 aa13.64□□□□□ -0.23
GPC4-201ENST00000370828 RPS6KA2Q15349 733 aa13.64□□□□□ -0.23
GPC4-201ENST00000370828 C16orf87Q6PH81 154 aa13.64□□□□□ -0.23
GPC4-201ENST00000370828 RBM43Q6ZSC3 357 aaKnown RBP13.64□□□□□ -0.23
GPC4-201ENST00000370828 ARHGAP22Q7Z5H3 698 aa13.64□□□□□ -0.23
GPC4-201ENST00000370828 TMCO5AQ8N6Q1 288 aa13.64□□□□□ -0.23
GPC4-201ENST00000370828 TBCKQ8TEA7 893 aa13.64□□□□□ -0.23
GPC4-201ENST00000370828 GLT8D2Q9H1C3 349 aa13.64□□□□□ -0.23
GPC4-201ENST00000370828 DKK3Q9UBP4 350 aa13.64□□□□□ -0.23
GPC4-201ENST00000370828 CPSF1Q10570 1443 aaKnown RBP13.64□□□□□ -0.23
GPC4-201ENST00000370828 CFAP74Q9C0B2 1584 aa13.64□□□□□ -0.23
GPC4-201ENST00000370828 RAD51CO43502 376 aa13.64□□□□□ -0.23
GPC4-201ENST00000370828 AP2B1P63010 937 aa13.64□□□□□ -0.23
GPC4-201ENST00000370828 PDE1BQ01064 536 aa13.64□□□□□ -0.23
GPC4-201ENST00000370828 TCIRG1Q13488 830 aa13.64□□□□□ -0.23
GPC4-201ENST00000370828 EYA3Q99504 573 aa13.64□□□□□ -0.23
GPC4-201ENST00000370828 TRIM51Q9BSJ1 452 aa13.64□□□□□ -0.23
GPC4-201ENST00000370828 DBR1Q9UK59 544 aaKnown RBP13.64□□□□□ -0.23
GPC4-201ENST00000370828 TRPC6Q9Y210 931 aa13.64□□□□□ -0.23
GPC4-201ENST00000370828 KIAA0556O60303 1618 aa13.64□□□□□ -0.23
GPC4-201ENST00000370828 E2F6O75461 281 aa13.64□□□□□ -0.23
GPC4-201ENST00000370828 DLATP10515 647 aaKnown RBP13.64□□□□□ -0.23
GPC4-201ENST00000370828 HSPA9P38646 679 aaKnown RBP13.64□□□□□ -0.23
GPC4-201ENST00000370828 HP1BP3Q5SSJ5 553 aaPredicted RBP13.64□□□□□ -0.23
GPC4-201ENST00000370828 LRIG3Q6UXM1 1119 aa13.64□□□□□ -0.23
GPC4-201ENST00000370828 DENND4BO75064 1496 aaPredicted RBP13.64□□□□□ -0.23
GPC4-201ENST00000370828 GYG1P46976 350 aa13.63□□□□□ -0.23
GPC4-201ENST00000370828 USP49Q70CQ1 688 aa13.63□□□□□ -0.23
GPC4-201ENST00000370828 ERP27Q96DN0 273 aa13.63□□□□□ -0.23
GPC4-201ENST00000370828 ACSBG1Q96GR2 724 aa13.63□□□□□ -0.23
GPC4-201ENST00000370828 EPS15L1Q9UBC2 864 aa13.63□□□□□ -0.23
GPC4-201ENST00000370828 UBN2Q6ZU65 1347 aa13.63□□□□□ -0.23
GPC4-201ENST00000370828 EEF1DP29692 281 aaKnown RBP13.63□□□□□ -0.23
GPC4-201ENST00000370828 TSGA10IPQ3SY00 556 aa13.63□□□□□ -0.23
GPC4-201ENST00000370828 EPHA10Q5JZY3 1008 aa13.63□□□□□ -0.23
GPC4-201ENST00000370828 MMGT1Q8N4V1 131 aa13.63□□□□□ -0.23
GPC4-201ENST00000370828 PSTPIP2Q9H939 334 aa13.63□□□□□ -0.23
GPC4-201ENST00000370828 ZBBXA8MT70 800 aa13.63□□□□□ -0.23
GPC4-201ENST00000370828 K7ENM7 598 aa13.63□□□□□ -0.23
GPC4-201ENST00000370828 STK10O94804 968 aaKnown RBP13.63□□□□□ -0.23
GPC4-201ENST00000370828 ARFIP2P53365 341 aa13.63□□□□□ -0.23
GPC4-201ENST00000370828 TMPRSS15P98073 1019 aa13.63□□□□□ -0.23
GPC4-201ENST00000370828 ARL6IP4Q66PJ3 421 aaKnown RBP13.63□□□□□ -0.23
GPC4-201ENST00000370828 NSMFQ6X4W1 530 aa13.63□□□□□ -0.23
GPC4-201ENST00000370828 RASSF3Q86WH2 238 aa13.63□□□□□ -0.23
GPC4-201ENST00000370828 MB21D2Q8IYB1 491 aaPredicted RBP13.63□□□□□ -0.23
GPC4-201ENST00000370828 SLITRK6Q9H5Y7 841 aa13.63□□□□□ -0.23
GPC4-201ENST00000370828 GINM1Q9NU53 330 aa13.63□□□□□ -0.23
GPC4-201ENST00000370828 STK17AQ9UEE5 414 aa13.63□□□□□ -0.23
GPC4-201ENST00000370828 DMGDHQ9UI17 866 aaKnown RBP13.63□□□□□ -0.23
GPC4-201ENST00000370828 LZTS1Q9Y250 596 aa13.63□□□□□ -0.23
GPC4-201ENST00000370828 TMCC1O94876 653 aa13.63□□□□□ -0.23
GPC4-201ENST00000370828 SERPINB3P29508 390 aa13.63□□□□□ -0.23
GPC4-201ENST00000370828 SNX16P57768 344 aa13.63□□□□□ -0.23
GPC4-201ENST00000370828 DYNLT1P63172 113 aa13.63□□□□□ -0.23
GPC4-201ENST00000370828 EZH2Q15910 746 aaKnown RBP13.63□□□□□ -0.23
GPC4-201ENST00000370828 GPR101Q96P66 508 aaPredicted RBP13.63□□□□□ -0.23
GPC4-201ENST00000370828 PAPOLBQ9NRJ5 636 aaKnown RBP13.63□□□□□ -0.23
GPC4-201ENST00000370828 FBXO2Q9UK22 296 aaPredicted RBP13.63□□□□□ -0.23
GPC4-201ENST00000370828 TRAF3IP3Q9Y228 551 aa13.63□□□□□ -0.23
GPC4-201ENST00000370828 PABPN1LA6NDY0 278 aaKnown RBP13.62□□□□□ -0.23
GPC4-201ENST00000370828 PP2D1A8MPX8 630 aa13.62□□□□□ -0.23
GPC4-201ENST00000370828 MAFGO15525 162 aa13.62□□□□□ -0.23
GPC4-201ENST00000370828 CFBP00751 764 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms