RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 CSPG5O95196 566 aa15□□□□□ -0.01
RPF1-201ENST00000370654 FOSP01100 380 aaPredicted RBP15□□□□□ -0.01
RPF1-201ENST00000370654 CTNNB1P35222 781 aa15□□□□□ -0.01
RPF1-201ENST00000370654 TMEM266Q2M3C6 531 aa15□□□□□ -0.01
RPF1-201ENST00000370654 LEXMQ3ZCV2 418 aa15□□□□□ -0.01
RPF1-201ENST00000370654 MTHFD1LQ6UB35 978 aa15□□□□□ -0.01
RPF1-201ENST00000370654 RSPH3Q86UC2 560 aa15□□□□□ -0.01
RPF1-201ENST00000370654 PLA2G4DQ86XP0 818 aa15□□□□□ -0.01
RPF1-201ENST00000370654 CCDC60Q8IWA6 550 aaPredicted RBP15□□□□□ -0.01
RPF1-201ENST00000370654 FIBCD1Q8N539 461 aa15□□□□□ -0.01
RPF1-201ENST00000370654 BANK1Q8NDB2 785 aa15□□□□□ -0.01
RPF1-201ENST00000370654 RASGRP4Q8TDF6 673 aa15□□□□□ -0.01
RPF1-201ENST00000370654 BRF1Q92994 677 aa15□□□□□ -0.01
RPF1-201ENST00000370654 SAMD11Q96NU1 681 aa15□□□□□ -0.01
RPF1-201ENST00000370654 AZI2Q9H6S1 392 aa15□□□□□ -0.01
RPF1-201ENST00000370654 TRPV2Q9Y5S1 764 aa15□□□□□ -0.01
RPF1-201ENST00000370654 ADGRA3Q8IWK6 1321 aa15□□□□□ -0.01
RPF1-201ENST00000370654 RALGAPA2Q2PPJ7 1873 aa14.99□□□□□ -0.01
RPF1-201ENST00000370654 POTEB3A0JP26 581 aa14.99□□□□□ -0.01
RPF1-201ENST00000370654 DGKIO75912 1065 aa14.99□□□□□ -0.01
RPF1-201ENST00000370654 SCG2P13521 617 aa14.99□□□□□ -0.01
RPF1-201ENST00000370654 HSPA4P34932 840 aa14.99□□□□□ -0.01
RPF1-201ENST00000370654 GTF2F1P35269 517 aaKnown RBP eCLIP14.99□□□□□ -0.01
RPF1-201ENST00000370654 BMPR1AP36894 532 aa14.99□□□□□ -0.01
RPF1-201ENST00000370654 METAP2P50579 478 aaKnown RBP eCLIP14.99□□□□□ -0.01
RPF1-201ENST00000370654 AP3B2Q13367 1082 aa14.99□□□□□ -0.01
RPF1-201ENST00000370654 CAMK1Q14012 370 aa14.99□□□□□ -0.01
RPF1-201ENST00000370654 POTEBQ6S5H4 581 aa14.99□□□□□ -0.01
RPF1-201ENST00000370654 NEK9Q8TD19 979 aa14.99□□□□□ -0.01
RPF1-201ENST00000370654 TMEM40Q8WWA1 233 aa14.99□□□□□ -0.01
RPF1-201ENST00000370654 PHKBQ93100 1093 aa14.99□□□□□ -0.01
RPF1-201ENST00000370654 C11orf16Q9NQ32 467 aa14.99□□□□□ -0.01
RPF1-201ENST00000370654 PADI3Q9ULW8 664 aa14.99□□□□□ -0.01
RPF1-201ENST00000370654 MRPL42Q9Y6G3 142 aaKnown RBP14.99□□□□□ -0.01
RPF1-201ENST00000370654 C5orf67F2Z3F1 127 aa14.98□□□□□ -0.01
RPF1-201ENST00000370654 hCG_1984214I3L0E3 225 aa14.98□□□□□ -0.01
RPF1-201ENST00000370654 MGEA5O60502 916 aa14.98□□□□□ -0.01
RPF1-201ENST00000370654 CYP3A4P08684 503 aa14.98□□□□□ -0.01
RPF1-201ENST00000370654 DNAJB1P25685 340 aa14.98□□□□□ -0.01
RPF1-201ENST00000370654 KLRC1P26715 233 aa14.98□□□□□ -0.01
RPF1-201ENST00000370654 ZNF76P36508 570 aa14.98□□□□□ -0.01
RPF1-201ENST00000370654 LTBRP36941 435 aa14.98□□□□□ -0.01
RPF1-201ENST00000370654 KRT32Q14532 448 aa14.98□□□□□ -0.01
RPF1-201ENST00000370654 NTRK3Q16288 839 aa14.98□□□□□ -0.01
RPF1-201ENST00000370654 PTPROQ16827 1216 aa14.98□□□□□ -0.01
RPF1-201ENST00000370654 SWSAP1Q6NVH7 229 aa14.98□□□□□ -0.01
RPF1-201ENST00000370654 ZNF713Q8N859 430 aaPredicted RBP14.98□□□□□ -0.01
RPF1-201ENST00000370654 CLP1Q92989 425 aaKnown RBP14.98□□□□□ -0.01
RPF1-201ENST00000370654 PPP1R16BQ96T49 567 aa14.98□□□□□ -0.01
RPF1-201ENST00000370654 CELF4Q9BZC1 486 aaKnown RBP14.98□□□□□ -0.01
RPF1-201ENST00000370654 IGSF9BQ9UPX0 1349 aa14.98□□□□□ -0.01
RPF1-201ENST00000370654 FAM86C2PA6NEL3 165 aa14.98□□□□□ -0.01
RPF1-201ENST00000370654 GRXCR2A6NFK2 248 aa14.98□□□□□ -0.01
RPF1-201ENST00000370654 RCAN1P53805 252 aa14.98□□□□□ -0.01
RPF1-201ENST00000370654 DLX2Q07687 328 aaPredicted RBP14.98□□□□□ -0.01
RPF1-201ENST00000370654 BTG3Q14201 252 aaPredicted RBP14.98□□□□□ -0.01
RPF1-201ENST00000370654 COL19A1Q14993 1142 aa14.98□□□□□ -0.01
RPF1-201ENST00000370654 IER5Q5VY09 327 aa14.98□□□□□ -0.01
RPF1-201ENST00000370654 PTCRAQ6ISU1 281 aaPredicted RBP14.98□□□□□ -0.01
RPF1-201ENST00000370654 NIPA1Q7RTP0 329 aa14.98□□□□□ -0.01
RPF1-201ENST00000370654 TRMT1LQ7Z2T5 733 aaKnown RBP14.98□□□□□ -0.01
RPF1-201ENST00000370654 FAM178BQ8IXR5 827 aa14.98□□□□□ -0.01
RPF1-201ENST00000370654 KIAA0319LQ8IZA0 1049 aa14.98□□□□□ -0.01
RPF1-201ENST00000370654 LRFN3Q9BTN0 628 aa14.98□□□□□ -0.01
RPF1-201ENST00000370654 ZMYND12Q9H0C1 365 aa14.98□□□□□ -0.01
RPF1-201ENST00000370654 NSUN3Q9H649 340 aaKnown RBP14.98□□□□□ -0.01
RPF1-201ENST00000370654 NCOA5Q9HCD5 579 aaKnown RBP14.98□□□□□ -0.01
RPF1-201ENST00000370654 ALG13Q9NP73 1137 aaKnown RBP14.98□□□□□ -0.01
RPF1-201ENST00000370654 KIAA1671Q9BY89 1806 aa14.97□□□□□ -0.01
RPF1-201ENST00000370654 NID2Q14112 1375 aa14.97□□□□□ -0.01
RPF1-201ENST00000370654 SMIM35A0A1B0GVV1 85 aa14.97□□□□□ -0.01
RPF1-201ENST00000370654 ESYT2A0FGR8 921 aa14.97□□□□□ -0.01
RPF1-201ENST00000370654 IPO5O00410 1097 aaKnown RBP14.97□□□□□ -0.01
RPF1-201ENST00000370654 BACH1O14867 736 aa14.97□□□□□ -0.01
RPF1-201ENST00000370654 PRPF3O43395 683 aaKnown RBP14.97□□□□□ -0.01
RPF1-201ENST00000370654 HMGB1P09429 215 aaKnown RBP14.97□□□□□ -0.01
RPF1-201ENST00000370654 IBSPP21815 317 aaPredicted RBP14.97□□□□□ -0.01
RPF1-201ENST00000370654 RPS6KB1P23443 525 aa14.97□□□□□ -0.01
RPF1-201ENST00000370654 FGD1P98174 961 aa14.97□□□□□ -0.01
RPF1-201ENST00000370654 KRT76Q01546 638 aa14.97□□□□□ -0.01
RPF1-201ENST00000370654 HYAL1Q12794 435 aa14.97□□□□□ -0.01
RPF1-201ENST00000370654 PAN2Q504Q3 1202 aaKnown RBP14.97□□□□□ -0.01
RPF1-201ENST00000370654 TIGD5Q53EQ6 642 aa14.97□□□□□ -0.01
RPF1-201ENST00000370654 EP400NLQ6ZTU2 488 aa14.97□□□□□ -0.01
RPF1-201ENST00000370654 ATP8B4Q8TF62 1192 aa14.97□□□□□ -0.01
RPF1-201ENST00000370654 GJA10Q969M2 543 aa14.97□□□□□ -0.01
RPF1-201ENST00000370654 LENG9Q96B70 501 aa14.97□□□□□ -0.01
RPF1-201ENST00000370654 LARP6Q9BRS8 491 aaKnown RBP14.97□□□□□ -0.01
RPF1-201ENST00000370654 AGXT2Q9BYV1 514 aa14.97□□□□□ -0.01
RPF1-201ENST00000370654 ZNF302Q9NR11 478 aa14.97□□□□□ -0.01
RPF1-201ENST00000370654 HCSTQ9UBK5 93 aa14.97□□□□□ -0.01
RPF1-201ENST00000370654 GINS2Q9Y248 185 aa14.97□□□□□ -0.01
RPF1-201ENST00000370654 NOC2LQ9Y3T9 749 aaKnown RBP14.97□□□□□ -0.01
RPF1-201ENST00000370654 EVPLQ92817 2033 aa14.96□□□□□ -0.01
RPF1-201ENST00000370654 LINC01565O15544 149 aa14.96□□□□□ -0.02
RPF1-201ENST00000370654 HBP1O60381 514 aa14.96□□□□□ -0.02
RPF1-201ENST00000370654 CCT2P78371 535 aaKnown RBP14.96□□□□□ -0.02
RPF1-201ENST00000370654 PAK2Q13177 524 aa14.96□□□□□ -0.02
RPF1-201ENST00000370654 PDXDC2PQ6P474 469 aa14.96□□□□□ -0.02
RPF1-201ENST00000370654 BLOC1S2Q6QNY1 142 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms