RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 GOLGA6L7A0A1B0GV03 622 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 TTC26A0AVF1 554 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 DDTLA6NHG4 134 aaPredicted RBP5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 MYMKA6NI61 221 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 PPP1R3GB7ZBB8 358 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 FOXP2O15409 715 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 DLATP10515 647 aaKnown RBP5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 MUTP22033 750 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 RFX1P22670 979 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 STAT3P40763 770 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 CLCN6P51797 869 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 MNAT1P51948 309 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 PTK2Q05397 1052 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 SEPT14Q6ZU15 432 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 GSTA5Q7RTV2 222 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 ZNF280CQ8ND82 737 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 TRIM11Q96F44 468 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 ADPGKQ9BRR6 497 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 POLR3CQ9BUI4 534 aaPredicted RBP5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 TEX13BQ9BXU2 312 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 MTFR1LQ9H019 292 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 SUGCTQ9HAC7 445 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 PCDHA13Q9Y5I0 950 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 NID2Q14112 1375 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 ROBO3Q96MS0 1386 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 ANO9A1A5B4 782 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 NDC80O14777 642 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 MAFGO15525 162 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 IBSPP21815 317 aaPredicted RBP5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 SLC8A3P57103 927 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 KCNH2Q12809 1159 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 STK4Q13043 487 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 NEDD9Q14511 834 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 SURF1Q15526 300 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 METTL13Q8N6R0 699 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 XXYLT1Q8NBI6 393 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 TRIM6Q9C030 488 aaPredicted RBP5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 TMEM39BQ9GZU3 492 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 RAB17Q9H0T7 212 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 C5P01031 1676 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 USP27XA6NNY8 438 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 EIF3CLB5ME19 914 aaKnown RBP5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 KCNK3O14649 394 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 SLC16A3O15427 465 aaKnown RBP5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 BUB1O43683 1085 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 SEC31AO94979 1220 aaKnown RBP5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 LDHAP00338 332 aaKnown RBP5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 ABCB4P21439 1286 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 SREBF1P36956 1147 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 GMPSP49915 693 aaPredicted RBP5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 PLCB3Q01970 1234 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 MTMR2Q13614 643 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 DCUN1D2Q6PH85 259 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 TOGARAM2Q6ZUX3 1019 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 MICALL1Q8N3F8 863 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 FAM133AQ8N9E0 248 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 IPO4Q8TEX9 1081 aaKnown RBP5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 MKL1Q969V6 931 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 CALR3Q96L12 384 aaKnown RBP5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 PSMB7Q99436 277 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 EIF3CQ99613 913 aaKnown RBP5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 MIS12Q9H081 205 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 ATP6V0A4Q9HBG4 840 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 SPON1Q9HCB6 807 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 DDX4Q9NQI0 724 aaKnown RBP5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 PCDHA10Q9Y5I2 948 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 UBE4BO95155 1302 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 ZBTB22O15209 634 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 CTIFO43310 598 aaKnown RBP5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 ONECUT3O60422 494 aaPredicted RBP5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 TMEM191BP0C7N4 346 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 GJC1P36383 396 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 SARSP49591 514 aaKnown RBP5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 HNRNPH2P55795 449 aaKnown RBP5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 PEX3P56589 373 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 MTMR3Q13615 1198 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 COL9A3Q14050 684 aaPredicted RBP5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 SPDYE2Q495Y8 402 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 MTERF2Q49AM1 385 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 GPIHBP1Q8IV16 184 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 RNF10Q8N5U6 811 aaKnown RBP5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 BANK1Q8NDB2 785 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 TCP11Q8WWU5 503 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 SLC10A4Q96EP9 437 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 DEFB129Q9H1M3 183 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 PARP2Q9UGN5 583 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 BAZ2BQ9UIF8 2168 aaKnown RBP5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 CCDC151A5D8V7 595 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 ZNF233A6NK53 670 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 SFI1A8K8P3 1242 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 K7ERI5 159 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 ICAM1P05362 532 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 PNMA6AP0CW24 399 aaPredicted RBP5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 CD19P15391 556 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 ANXA13P27216 316 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 HACE1Q8IYU2 909 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 ANKRD13CQ8N6S4 541 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 FAM76AQ8TAV0 307 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 MXRA8Q9BRK3 442 aa5.78□□□□□ -1.48
SMNDC1-202ENST00000369603 GOLGA6BA6NDN3 693 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms