RNA–Protein interactions for RNA: ENST00000368102.5

SNHG28-201, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNHG28, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-201ENST00000368102 UPF1Q92900 1129 aaKnown RBP eCLIP15.45■□□□□ 0.06
SNHG28-201ENST00000368102 LENG9Q96B70 501 aa15.45■□□□□ 0.06
SNHG28-201ENST00000368102 TSG101Q99816 390 aa15.45■□□□□ 0.06
SNHG28-201ENST00000368102 LSM14BQ9BX40 385 aaKnown RBP15.45■□□□□ 0.06
SNHG28-201ENST00000368102 IKZF4Q9H2S9 585 aa15.45■□□□□ 0.06
SNHG28-201ENST00000368102 RABEP2Q9H5N1 569 aa15.45■□□□□ 0.06
SNHG28-201ENST00000368102 ZNF70Q9UC06 446 aaPredicted RBP15.45■□□□□ 0.06
SNHG28-201ENST00000368102 ZBTB12Q9Y330 459 aaPredicted RBP15.45■□□□□ 0.06
SNHG28-201ENST00000368102 GOLGA8KD6RF30 607 aa15.45■□□□□ 0.06
SNHG28-201ENST00000368102 ACTN1P12814 892 aa15.45■□□□□ 0.06
SNHG28-201ENST00000368102 HNRNPH3P31942 346 aaKnown RBP15.45■□□□□ 0.06
SNHG28-201ENST00000368102 IRAK1P51617 712 aa15.45■□□□□ 0.06
SNHG28-201ENST00000368102 SWT1Q5T5J6 900 aaKnown RBP15.45■□□□□ 0.06
SNHG28-201ENST00000368102 ZNF572Q7Z3I7 529 aaPredicted RBP15.45■□□□□ 0.06
SNHG28-201ENST00000368102 CCDC65Q8IXS2 484 aa15.45■□□□□ 0.06
SNHG28-201ENST00000368102 LARGE2Q8N3Y3 721 aa15.45■□□□□ 0.06
SNHG28-201ENST00000368102 MMGT1Q8N4V1 131 aa15.45■□□□□ 0.06
SNHG28-201ENST00000368102 GOLPH3Q9H4A6 298 aa15.45■□□□□ 0.06
SNHG28-201ENST00000368102 TBX3O15119 743 aa15.44■□□□□ 0.06
SNHG28-201ENST00000368102 TACC1O75410 805 aa15.44■□□□□ 0.06
SNHG28-201ENST00000368102 FTCDO95954 541 aa15.44■□□□□ 0.06
SNHG28-201ENST00000368102 VIL1P09327 827 aaKnown RBP15.44■□□□□ 0.06
SNHG28-201ENST00000368102 CYP11B2P19099 503 aa15.44■□□□□ 0.06
SNHG28-201ENST00000368102 CDK17Q00537 523 aa15.44■□□□□ 0.06
SNHG28-201ENST00000368102 CATSPER3Q86XQ3 398 aa15.44■□□□□ 0.06
SNHG28-201ENST00000368102 FAM151AQ8WW52 585 aa15.44■□□□□ 0.06
SNHG28-201ENST00000368102 GMLQ99445 158 aa15.44■□□□□ 0.06
SNHG28-201ENST00000368102 ARHGEF10LQ9HCE6 1279 aa15.44■□□□□ 0.06
SNHG28-201ENST00000368102 ZNF277Q9NRM2 450 aaPredicted RBP15.44■□□□□ 0.06
SNHG28-201ENST00000368102 ABCB11O95342 1321 aa15.44■□□□□ 0.06
SNHG28-201ENST00000368102 ERLIN2O94905 339 aa15.44■□□□□ 0.06
SNHG28-201ENST00000368102 STAT2P52630 851 aa15.44■□□□□ 0.06
SNHG28-201ENST00000368102 ASTE1Q2TB18 679 aaPredicted RBP15.44■□□□□ 0.06
SNHG28-201ENST00000368102 HERC4Q5GLZ8 1057 aaPredicted RBP15.44■□□□□ 0.06
SNHG28-201ENST00000368102 HAUS3Q68CZ6 603 aa15.44■□□□□ 0.06
SNHG28-201ENST00000368102 MICALL1Q8N3F8 863 aa15.44■□□□□ 0.06
SNHG28-201ENST00000368102 OGFOD1Q8N543 542 aa15.44■□□□□ 0.06
SNHG28-201ENST00000368102 SPATA4Q8NEY3 305 aa15.44■□□□□ 0.06
SNHG28-201ENST00000368102 TRIM58Q8NG06 486 aa15.44■□□□□ 0.06
SNHG28-201ENST00000368102 TLR10Q9BXR5 811 aa15.44■□□□□ 0.06
SNHG28-201ENST00000368102 TSGA10Q9BZW7 698 aa15.44■□□□□ 0.06
SNHG28-201ENST00000368102 RBM12Q9NTZ6 932 aaKnown RBP15.44■□□□□ 0.06
SNHG28-201ENST00000368102 SYNPO2Q9UMS6 1093 aa15.44■□□□□ 0.06
SNHG28-201ENST00000368102 COL4A3BPQ9Y5P4 624 aa15.44■□□□□ 0.06
SNHG28-201ENST00000368102 ESYT3A0FGR9 886 aa15.43■□□□□ 0.06
SNHG28-201ENST00000368102 SLC26A4O43511 780 aa15.43■□□□□ 0.06
SNHG28-201ENST00000368102 USO1O60763 962 aaKnown RBP15.43■□□□□ 0.06
SNHG28-201ENST00000368102 ARSHQ5FYA8 562 aa15.43■□□□□ 0.06
SNHG28-201ENST00000368102 FAM83BQ5T0W9 1011 aa15.43■□□□□ 0.06
SNHG28-201ENST00000368102 FOXR2Q6PJQ5 311 aa15.43■□□□□ 0.06
SNHG28-201ENST00000368102 RTKN2Q8IZC4 609 aa15.43■□□□□ 0.06
SNHG28-201ENST00000368102 CYP2W1Q8TAV3 490 aa15.43■□□□□ 0.06
SNHG28-201ENST00000368102 SCFD1Q8WVM8 642 aa15.43■□□□□ 0.06
SNHG28-201ENST00000368102 CEP89Q96ST8 783 aa15.43■□□□□ 0.06
SNHG28-201ENST00000368102 SH3GL2Q99962 352 aa15.43■□□□□ 0.06
SNHG28-201ENST00000368102 CAPS2Q9BXY5 557 aa15.43■□□□□ 0.06
SNHG28-201ENST00000368102 HDAC9Q9UKV0 1011 aa15.43■□□□□ 0.06
SNHG28-201ENST00000368102 TMX2Q9Y320 296 aa15.43■□□□□ 0.06
SNHG28-201ENST00000368102 PCDHA2Q9Y5H9 948 aa15.43■□□□□ 0.06
SNHG28-201ENST00000368102 ATXN2Q99700 1313 aaKnown RBP15.43■□□□□ 0.06
SNHG28-201ENST00000368102 SHTN1A0MZ66 631 aa15.43■□□□□ 0.06
SNHG28-201ENST00000368102 EIF3HO15372 352 aaKnown RBP eCLIP15.43■□□□□ 0.06
SNHG28-201ENST00000368102 OPA1O60313 960 aa15.43■□□□□ 0.06
SNHG28-201ENST00000368102 CIITAP33076 1130 aa15.43■□□□□ 0.06
SNHG28-201ENST00000368102 CCT5P48643 541 aa15.43■□□□□ 0.06
SNHG28-201ENST00000368102 SLC12A3P55017 1021 aa15.43■□□□□ 0.06
SNHG28-201ENST00000368102 FKBP3Q00688 224 aaKnown RBP15.43■□□□□ 0.06
SNHG28-201ENST00000368102 KLHDC7AQ5VTJ3 777 aa15.43■□□□□ 0.06
SNHG28-201ENST00000368102 SND1Q7KZF4 910 aaKnown RBP eCLIP15.43■□□□□ 0.06
SNHG28-201ENST00000368102 FAM133AQ8N9E0 248 aa15.43■□□□□ 0.06
SNHG28-201ENST00000368102 PROCA1Q8NCQ7 364 aaPredicted RBP15.43■□□□□ 0.06
SNHG28-201ENST00000368102 NCAPGQ9BPX3 1015 aa15.43■□□□□ 0.06
SNHG28-201ENST00000368102 VEZTQ9HBM0 779 aa15.43■□□□□ 0.06
SNHG28-201ENST00000368102 MSH4O15457 936 aa15.42■□□□□ 0.06
SNHG28-201ENST00000368102 KRT18P05783 430 aaKnown RBP15.42■□□□□ 0.06
SNHG28-201ENST00000368102 SPATA31C1P0DKV0 1188 aa15.42■□□□□ 0.06
SNHG28-201ENST00000368102 EPB41P11171 864 aaKnown RBP15.42■□□□□ 0.06
SNHG28-201ENST00000368102 RAPGEF1Q13905 1077 aa15.42■□□□□ 0.06
SNHG28-201ENST00000368102 CDAN1Q8IWY9 1227 aa15.42■□□□□ 0.06
SNHG28-201ENST00000368102 ERMNQ8TAM6 284 aa15.42■□□□□ 0.06
SNHG28-201ENST00000368102 FAM20AQ96MK3 541 aa15.42■□□□□ 0.06
SNHG28-201ENST00000368102 PSMD1Q99460 953 aa15.42■□□□□ 0.06
SNHG28-201ENST00000368102 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.42■□□□□ 0.06
SNHG28-201ENST00000368102 ZBTB21Q9ULJ3 1066 aa15.42■□□□□ 0.06
SNHG28-201ENST00000368102 FAM169AQ9Y6X4 670 aa15.42■□□□□ 0.06
SNHG28-201ENST00000368102 CNTNAP1P78357 1384 aa15.42■□□□□ 0.06
SNHG28-201ENST00000368102 RSPH10B2B2RC85 870 aa15.42■□□□□ 0.06
SNHG28-201ENST00000368102 RSPH10BP0C881 870 aa15.42■□□□□ 0.06
SNHG28-201ENST00000368102 KLRC1P26715 233 aa15.42■□□□□ 0.06
SNHG28-201ENST00000368102 RPA1P27694 616 aa15.42■□□□□ 0.06
SNHG28-201ENST00000368102 POLD1P28340 1107 aa15.42■□□□□ 0.06
SNHG28-201ENST00000368102 PPARDQ03181 441 aa15.42■□□□□ 0.06
SNHG28-201ENST00000368102 PABPC4Q13310 644 aaKnown RBP eCLIP15.42■□□□□ 0.06
SNHG28-201ENST00000368102 TRADDQ15628 312 aa15.42■□□□□ 0.06
SNHG28-201ENST00000368102 SPDYE2Q495Y8 402 aa15.42■□□□□ 0.06
SNHG28-201ENST00000368102 GRIPAP1Q4V328 841 aa15.42■□□□□ 0.06
SNHG28-201ENST00000368102 TTC19Q6DKK2 380 aaPredicted RBP15.42■□□□□ 0.06
SNHG28-201ENST00000368102 CCDC84Q86UT8 332 aaPredicted RBP15.42■□□□□ 0.06
SNHG28-201ENST00000368102 TSEN2Q8NCE0 465 aaKnown RBP15.42■□□□□ 0.06
SNHG28-201ENST00000368102 TBC1D5Q92609 795 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms