RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 FAM207AQ9NSI2 230 aaPredicted RBP15.44■□□□□ 0.06
USF1-202ENST00000368020 CCPG1Q9ULG6 757 aa15.44■□□□□ 0.06
USF1-202ENST00000368020 ODF2LQ9ULJ1 636 aa15.44■□□□□ 0.06
USF1-202ENST00000368020 GUCA1BQ9UMX6 200 aa15.44■□□□□ 0.06
USF1-202ENST00000368020 CSADQ9Y600 493 aa15.44■□□□□ 0.06
USF1-202ENST00000368020 PAPPA2Q9BXP8 1791 aa15.44■□□□□ 0.06
USF1-202ENST00000368020 MYH11P35749 1972 aa15.44■□□□□ 0.06
USF1-202ENST00000368020 NR2F2P24468 414 aa15.43■□□□□ 0.06
USF1-202ENST00000368020 KLK7P49862 253 aa15.43■□□□□ 0.06
USF1-202ENST00000368020 USP14P54578 494 aa15.43■□□□□ 0.06
USF1-202ENST00000368020 MAPK8IP2Q13387 824 aaPredicted RBP15.43■□□□□ 0.06
USF1-202ENST00000368020 EPHA7Q15375 998 aa15.43■□□□□ 0.06
USF1-202ENST00000368020 NFIL3Q16649 462 aa15.43■□□□□ 0.06
USF1-202ENST00000368020 SFR1Q86XK3 245 aa15.43■□□□□ 0.06
USF1-202ENST00000368020 ZNF577Q9BSK1 485 aa15.43■□□□□ 0.06
USF1-202ENST00000368020 AS3MTQ9HBK9 375 aa15.43■□□□□ 0.06
USF1-202ENST00000368020 TBC1D7Q9P0N9 293 aa15.43■□□□□ 0.06
USF1-202ENST00000368020 FRMPD4Q14CM0 1322 aa15.43■□□□□ 0.06
USF1-202ENST00000368020 RPTORQ8N122 1335 aa15.43■□□□□ 0.06
USF1-202ENST00000368020 FAM13AO94988 1023 aa15.43■□□□□ 0.06
USF1-202ENST00000368020 VGLL4Q14135 290 aa15.43■□□□□ 0.06
USF1-202ENST00000368020 PDXDC1Q6P996 788 aa15.43■□□□□ 0.06
USF1-202ENST00000368020 NELFCDQ8IXH7 590 aa15.43■□□□□ 0.06
USF1-202ENST00000368020 LRRN4CLQ8ND94 238 aa15.43■□□□□ 0.06
USF1-202ENST00000368020 GLIS3Q8NEA6 775 aa15.43■□□□□ 0.06
USF1-202ENST00000368020 TRIM58Q8NG06 486 aa15.43■□□□□ 0.06
USF1-202ENST00000368020 PURBQ96QR8 312 aaKnown RBP15.43■□□□□ 0.06
USF1-202ENST00000368020 MXRA8Q9BRK3 442 aa15.43■□□□□ 0.06
USF1-202ENST00000368020 ARMCX3Q9UH62 379 aaPredicted RBP15.43■□□□□ 0.06
USF1-202ENST00000368020 MYO6Q9UM54 1294 aa15.43■□□□□ 0.06
USF1-202ENST00000368020 FZD1Q9UP38 647 aa15.43■□□□□ 0.06
USF1-202ENST00000368020 TRPM7Q96QT4 1865 aa15.42■□□□□ 0.06
USF1-202ENST00000368020 NPHP3-ACAD11A0A0J9YXS1 232 aa15.42■□□□□ 0.06
USF1-202ENST00000368020 CTAGE15A4D2H0 777 aa15.42■□□□□ 0.06
USF1-202ENST00000368020 CTAGE8P0CG41 777 aa15.42■□□□□ 0.06
USF1-202ENST00000368020 EPB41P11171 864 aaKnown RBP15.42■□□□□ 0.06
USF1-202ENST00000368020 PSMC6P62333 389 aa15.42■□□□□ 0.06
USF1-202ENST00000368020 CYP4A11Q02928 519 aa15.42■□□□□ 0.06
USF1-202ENST00000368020 CKAP4Q07065 602 aaKnown RBP15.42■□□□□ 0.06
USF1-202ENST00000368020 PRKG1Q13976 671 aa15.42■□□□□ 0.06
USF1-202ENST00000368020 TTLL12Q14166 644 aaPredicted RBP15.42■□□□□ 0.06
USF1-202ENST00000368020 ZYXQ15942 572 aaKnown RBP15.42■□□□□ 0.06
USF1-202ENST00000368020 SLC9C1Q4G0N8 1177 aa15.42■□□□□ 0.06
USF1-202ENST00000368020 TEX35Q5T0J7 233 aa15.42■□□□□ 0.06
USF1-202ENST00000368020 RINT1Q6NUQ1 792 aa15.42■□□□□ 0.06
USF1-202ENST00000368020 RRAGAQ7L523 313 aa15.42■□□□□ 0.06
USF1-202ENST00000368020 CTAGE6Q86UF2 777 aa15.42■□□□□ 0.06
USF1-202ENST00000368020 CTAGE4Q8IX94 777 aa15.42■□□□□ 0.06
USF1-202ENST00000368020 KRT222Q8N1A0 295 aa15.42■□□□□ 0.06
USF1-202ENST00000368020 GOLGA5Q8TBA6 731 aa15.42■□□□□ 0.06
USF1-202ENST00000368020 BAP1Q92560 729 aa15.42■□□□□ 0.06
USF1-202ENST00000368020 IFIH1Q9BYX4 1025 aaKnown RBP15.42■□□□□ 0.06
USF1-202ENST00000368020 SNCAIPQ9Y6H5 919 aa15.42■□□□□ 0.06
USF1-202ENST00000368020 OTOFQ9HC10 1997 aa15.41■□□□□ 0.06
USF1-202ENST00000368020 LRRC53A6NM62 1247 aa15.41■□□□□ 0.06
USF1-202ENST00000368020 IPO5O00410 1097 aaKnown RBP15.41■□□□□ 0.06
USF1-202ENST00000368020 EML1O00423 815 aa15.41■□□□□ 0.06
USF1-202ENST00000368020 AKR1B10O60218 316 aa15.41■□□□□ 0.06
USF1-202ENST00000368020 SLITRK3O94933 977 aa15.41■□□□□ 0.06
USF1-202ENST00000368020 SERPING1P05155 500 aa15.41■□□□□ 0.06
USF1-202ENST00000368020 CLCN6P51797 869 aa15.41■□□□□ 0.06
USF1-202ENST00000368020 KIF11P52732 1056 aa15.41■□□□□ 0.06
USF1-202ENST00000368020 AMPD2Q01433 879 aa15.41■□□□□ 0.06
USF1-202ENST00000368020 BRD3Q15059 726 aa15.41■□□□□ 0.06
USF1-202ENST00000368020 SFMBT2Q5VUG0 894 aa15.41■□□□□ 0.06
USF1-202ENST00000368020 PAPD7Q5XG87 772 aaKnown RBP15.41■□□□□ 0.06
USF1-202ENST00000368020 IQCEQ6IPM2 695 aa15.41■□□□□ 0.06
USF1-202ENST00000368020 ERO1BQ86YB8 467 aa15.41■□□□□ 0.06
USF1-202ENST00000368020 TPH2Q8IWU9 490 aa15.41■□□□□ 0.06
USF1-202ENST00000368020 C2orf69Q8N8R5 385 aa15.41■□□□□ 0.06
USF1-202ENST00000368020 ZNF280CQ8ND82 737 aa15.41■□□□□ 0.06
USF1-202ENST00000368020 SMC1BQ8NDV3 1235 aa15.41■□□□□ 0.06
USF1-202ENST00000368020 CYP2W1Q8TAV3 490 aa15.41■□□□□ 0.06
USF1-202ENST00000368020 SECISBP2LQ93073 1101 aaKnown RBP15.41■□□□□ 0.06
USF1-202ENST00000368020 ALS2CR12Q96Q35 445 aa15.41■□□□□ 0.06
USF1-202ENST00000368020 MAF1Q9H063 256 aa15.41■□□□□ 0.06
USF1-202ENST00000368020 PARVGQ9HBI0 331 aa15.41■□□□□ 0.06
USF1-202ENST00000368020 GBA2Q9HCG7 927 aaPredicted RBP15.41■□□□□ 0.06
USF1-202ENST00000368020 PLCB1Q9NQ66 1216 aa15.41■□□□□ 0.06
USF1-202ENST00000368020 DAAM1Q9Y4D1 1078 aa15.41■□□□□ 0.06
USF1-202ENST00000368020 CTDP1Q9Y5B0 961 aaPredicted RBP15.41■□□□□ 0.06
USF1-202ENST00000368020 PHIPQ8WWQ0 1821 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 CCDC151A5D8V7 595 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 C19orf81C9J6K1 198 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 TACC1O75410 805 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 GCNT3O95395 438 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 XRCC5P13010 732 aaKnown RBP15.4■□□□□ 0.06
USF1-202ENST00000368020 ANXA13P27216 316 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 CACNB1Q02641 598 aaPredicted RBP15.4■□□□□ 0.06
USF1-202ENST00000368020 PPATQ06203 517 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 RAD51AP2Q09MP3 1159 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 ALCAMQ13740 583 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 PCNX4Q63HM2 1172 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 C1orf186Q6ZWK4 172 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 TRAPPC11Q7Z392 1133 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 FMNL3Q8IVF7 1028 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 RBM46Q8TBY0 533 aaKnown RBP15.4■□□□□ 0.06
USF1-202ENST00000368020 MKNK1Q9BUB5 465 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 ARHGAP20Q9P2F6 1191 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 BZW2Q9Y6E2 419 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms