RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 MSCO60682 206 aa12.74□□□□□ -0.37
USF1-201ENST00000368019 RNF40O75150 1001 aa12.74□□□□□ -0.37
USF1-201ENST00000368019 CYP2D6P10635 497 aa12.74□□□□□ -0.37
USF1-201ENST00000368019 SCG2P13521 617 aa12.74□□□□□ -0.37
USF1-201ENST00000368019 KIF5BP33176 963 aa12.74□□□□□ -0.37
USF1-201ENST00000368019 CCT6AP40227 531 aaKnown RBP12.74□□□□□ -0.37
USF1-201ENST00000368019 VAV2P52735 878 aa12.74□□□□□ -0.37
USF1-201ENST00000368019 ZBED6P86452 979 aa12.74□□□□□ -0.37
USF1-201ENST00000368019 ATP2B2Q01814 1243 aa12.74□□□□□ -0.37
USF1-201ENST00000368019 PFKFB3Q16875 520 aaPredicted RBP12.74□□□□□ -0.37
USF1-201ENST00000368019 CCDC178Q5BJE1 867 aa12.74□□□□□ -0.37
USF1-201ENST00000368019 EARS2Q5JPH6 523 aaKnown RBP12.74□□□□□ -0.37
USF1-201ENST00000368019 IRF2BP1Q8IU81 584 aa12.74□□□□□ -0.37
USF1-201ENST00000368019 SLC44A5Q8NCS7 719 aa12.74□□□□□ -0.37
USF1-201ENST00000368019 SHCBP1Q8NEM2 672 aa12.74□□□□□ -0.37
USF1-201ENST00000368019 SDR42E1Q8WUS8 393 aa12.74□□□□□ -0.37
USF1-201ENST00000368019 ATRIPQ8WXE1 791 aa12.74□□□□□ -0.37
USF1-201ENST00000368019 LPAR1Q92633 364 aa12.74□□□□□ -0.37
USF1-201ENST00000368019 JAKMIP2Q96AA8 810 aa12.74□□□□□ -0.37
USF1-201ENST00000368019 ERGIC2Q96RQ1 377 aa12.74□□□□□ -0.37
USF1-201ENST00000368019 ZKSCAN3Q9BRR0 538 aa12.74□□□□□ -0.37
USF1-201ENST00000368019 MOV10L1Q9BXT6 1211 aaKnown RBP12.74□□□□□ -0.37
USF1-201ENST00000368019 UBE2OQ9C0C9 1292 aaKnown RBP12.74□□□□□ -0.37
USF1-201ENST00000368019 VPS16Q9H269 839 aa12.74□□□□□ -0.37
USF1-201ENST00000368019 YY1AP1Q9H869 796 aa12.74□□□□□ -0.37
USF1-201ENST00000368019 FAM204AQ9H8W3 233 aa12.74□□□□□ -0.37
USF1-201ENST00000368019 INCENPQ9NQS7 918 aa12.74□□□□□ -0.37
USF1-201ENST00000368019 IVNS1ABPQ9Y6Y0 642 aa12.74□□□□□ -0.37
USF1-201ENST00000368019 A0A087WUV0 522 aaPredicted RBP12.73□□□□□ -0.37
USF1-201ENST00000368019 TTC26A0AVF1 554 aa12.73□□□□□ -0.37
USF1-201ENST00000368019 FAM205CA6NFA0 338 aa12.73□□□□□ -0.37
USF1-201ENST00000368019 GOLGA8KD6RF30 607 aa12.73□□□□□ -0.37
USF1-201ENST00000368019 STRNO43815 780 aa12.73□□□□□ -0.37
USF1-201ENST00000368019 EPB41P11171 864 aaKnown RBP12.73□□□□□ -0.37
USF1-201ENST00000368019 CYBAP13498 195 aa12.73□□□□□ -0.37
USF1-201ENST00000368019 ATP2B1P20020 1258 aa12.73□□□□□ -0.37
USF1-201ENST00000368019 PRCPP42785 496 aa12.73□□□□□ -0.37
USF1-201ENST00000368019 APBA1Q02410 837 aa12.73□□□□□ -0.37
USF1-201ENST00000368019 NNTQ13423 1086 aa12.73□□□□□ -0.37
USF1-201ENST00000368019 ZNF174Q15697 407 aa12.73□□□□□ -0.37
USF1-201ENST00000368019 DNAJC21Q5F1R6 531 aaKnown RBP12.73□□□□□ -0.37
USF1-201ENST00000368019 CCDC122Q5T0U0 273 aa12.73□□□□□ -0.37
USF1-201ENST00000368019 WDR78Q5VTH9 848 aa12.73□□□□□ -0.37
USF1-201ENST00000368019 OLFML2BQ68BL8 750 aa12.73□□□□□ -0.37
USF1-201ENST00000368019 CCNI2Q6ZMN8 369 aaPredicted RBP12.73□□□□□ -0.37
USF1-201ENST00000368019 TMEM179Q6ZVK1 233 aa12.73□□□□□ -0.37
USF1-201ENST00000368019 C4orf32Q8N8J7 132 aa12.73□□□□□ -0.37
USF1-201ENST00000368019 GIMAP8Q8ND71 665 aaPredicted RBP12.73□□□□□ -0.37
USF1-201ENST00000368019 SLC17A8Q8NDX2 589 aa12.73□□□□□ -0.37
USF1-201ENST00000368019 TRIM58Q8NG06 486 aa12.73□□□□□ -0.37
USF1-201ENST00000368019 ANKS1AQ92625 1134 aa12.73□□□□□ -0.37
USF1-201ENST00000368019 AK8Q96MA6 479 aa12.73□□□□□ -0.37
USF1-201ENST00000368019 MTRQ99707 1265 aa12.73□□□□□ -0.37
USF1-201ENST00000368019 EDEM3Q9BZQ6 932 aa12.73□□□□□ -0.37
USF1-201ENST00000368019 SPATC1LQ9H0A9 340 aa12.73□□□□□ -0.37
USF1-201ENST00000368019 DISC1Q9NRI5 854 aa12.73□□□□□ -0.37
USF1-201ENST00000368019 FAM184BQ9ULE4 1060 aa12.73□□□□□ -0.37
USF1-201ENST00000368019 V9GY48 417 aaPredicted RBP12.73□□□□□ -0.37
USF1-201ENST00000368019 PLXNA1Q9UIW2 1896 aa12.73□□□□□ -0.37
USF1-201ENST00000368019 SMIM22K7EJ46 135 aa12.72□□□□□ -0.37
USF1-201ENST00000368019 MPHOSPH10O00566 681 aaKnown RBP12.72□□□□□ -0.37
USF1-201ENST00000368019 KLRC4O43908 158 aa12.72□□□□□ -0.37
USF1-201ENST00000368019 OPA1O60313 960 aa12.72□□□□□ -0.37
USF1-201ENST00000368019 N4BP1O75113 896 aaKnown RBP12.72□□□□□ -0.37
USF1-201ENST00000368019 COBLO75128 1261 aa12.72□□□□□ -0.37
USF1-201ENST00000368019 LCA5LO95447 670 aa12.72□□□□□ -0.37
USF1-201ENST00000368019 TCP1P17987 556 aaKnown RBP12.72□□□□□ -0.37
USF1-201ENST00000368019 CCNE1P24864 410 aa12.72□□□□□ -0.37
USF1-201ENST00000368019 ADORA2AP29274 412 aa12.72□□□□□ -0.37
USF1-201ENST00000368019 DSG3P32926 999 aa12.72□□□□□ -0.37
USF1-201ENST00000368019 STAT6P42226 847 aa12.72□□□□□ -0.37
USF1-201ENST00000368019 TNNT3P45378 269 aaPredicted RBP12.72□□□□□ -0.37
USF1-201ENST00000368019 NOP2P46087 812 aaKnown RBP12.72□□□□□ -0.37
USF1-201ENST00000368019 GNAQP50148 359 aa12.72□□□□□ -0.37
USF1-201ENST00000368019 GYS2P54840 703 aa12.72□□□□□ -0.37
USF1-201ENST00000368019 NLRP5P59047 1200 aa12.72□□□□□ -0.37
USF1-201ENST00000368019 PPFIA1Q13136 1202 aa12.72□□□□□ -0.37
USF1-201ENST00000368019 TTC31Q49AM3 519 aaPredicted RBP12.72□□□□□ -0.37
USF1-201ENST00000368019 SBK1Q52WX2 424 aa12.72□□□□□ -0.37
USF1-201ENST00000368019 NCAPH2Q6IBW4 605 aa12.72□□□□□ -0.37
USF1-201ENST00000368019 TTI2Q6NXR4 508 aa12.72□□□□□ -0.37
USF1-201ENST00000368019 WDR59Q6PJI9 974 aa12.72□□□□□ -0.37
USF1-201ENST00000368019 KIAA1328Q86T90 577 aa12.72□□□□□ -0.37
USF1-201ENST00000368019 SUGP1Q8IWZ8 645 aaKnown RBP12.72□□□□□ -0.37
USF1-201ENST00000368019 C10orf67Q8IYJ2 551 aa12.72□□□□□ -0.37
USF1-201ENST00000368019 SMYD4Q8IYR2 804 aaPredicted RBP12.72□□□□□ -0.37
USF1-201ENST00000368019 DEFB123Q8N688 67 aa12.72□□□□□ -0.37
USF1-201ENST00000368019 C1orf131Q8NDD1 294 aaKnown RBP12.72□□□□□ -0.37
USF1-201ENST00000368019 AENQ8WTP8 325 aaKnown RBP12.72□□□□□ -0.37
USF1-201ENST00000368019 DYNLL2Q96FJ2 89 aa12.72□□□□□ -0.37
USF1-201ENST00000368019 CHP1Q99653 195 aa12.72□□□□□ -0.37
USF1-201ENST00000368019 CRACR2AQ9BSW2 395 aa12.72□□□□□ -0.37
USF1-201ENST00000368019 SENP6Q9GZR1 1112 aaPredicted RBP12.72□□□□□ -0.37
USF1-201ENST00000368019 ATP8A2Q9NTI2 1148 aa12.72□□□□□ -0.37
USF1-201ENST00000368019 EXOC1Q9NV70 894 aa12.72□□□□□ -0.37
USF1-201ENST00000368019 KBTBD4Q9NVX7 518 aa12.72□□□□□ -0.37
USF1-201ENST00000368019 MTMR10Q9NXD2 777 aa12.72□□□□□ -0.37
USF1-201ENST00000368019 RNF14Q9UBS8 474 aa12.72□□□□□ -0.37
USF1-201ENST00000368019 SWAP70Q9UH65 585 aa12.72□□□□□ -0.37
USF1-201ENST00000368019 RSPH14Q9UHP6 348 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms