RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 CAVIN2O95810 425 aa10.61□□□□□ -0.71
VTA1-201ENST00000367621 PLA2G4BP0C869 781 aa10.61□□□□□ -0.71
VTA1-201ENST00000367621 MUTP22033 750 aa10.61□□□□□ -0.71
VTA1-201ENST00000367621 ADORA2AP29274 412 aa10.61□□□□□ -0.71
VTA1-201ENST00000367621 ZNF165P49910 485 aa10.61□□□□□ -0.71
VTA1-201ENST00000367621 CYP4A11Q02928 519 aa10.61□□□□□ -0.71
VTA1-201ENST00000367621 EHHADHQ08426 723 aa10.61□□□□□ -0.71
VTA1-201ENST00000367621 KCNB1Q14721 858 aa10.61□□□□□ -0.71
VTA1-201ENST00000367621 NCAPHQ15003 741 aa10.61□□□□□ -0.71
VTA1-201ENST00000367621 PWP2Q15269 919 aaKnown RBP10.61□□□□□ -0.71
VTA1-201ENST00000367621 TAF1CQ15572 869 aaPredicted RBP10.61□□□□□ -0.71
VTA1-201ENST00000367621 UVSSAQ2YD98 709 aa10.61□□□□□ -0.71
VTA1-201ENST00000367621 HAUS3Q68CZ6 603 aa10.61□□□□□ -0.71
VTA1-201ENST00000367621 CYP4F22Q6NT55 531 aa10.61□□□□□ -0.71
VTA1-201ENST00000367621 PLEKHH3Q7Z736 793 aa10.61□□□□□ -0.71
VTA1-201ENST00000367621 LUZP1Q86V48 1076 aa10.61□□□□□ -0.71
VTA1-201ENST00000367621 KCTD17Q8N5Z5 321 aa10.61□□□□□ -0.71
VTA1-201ENST00000367621 CDK5RAP3Q96JB5 506 aa10.61□□□□□ -0.71
VTA1-201ENST00000367621 TRPM7Q96QT4 1865 aa10.61□□□□□ -0.71
VTA1-201ENST00000367621 SLC15A5A6NIM6 579 aa10.6□□□□□ -0.71
VTA1-201ENST00000367621 C3orf80F5H4A9 247 aa10.6□□□□□ -0.71
VTA1-201ENST00000367621 RHOBTB3O94955 611 aa10.6□□□□□ -0.71
VTA1-201ENST00000367621 STBD1O95210 358 aa10.6□□□□□ -0.71
VTA1-201ENST00000367621 LYPLA2O95372 231 aa10.6□□□□□ -0.71
VTA1-201ENST00000367621 ARIH2O95376 493 aa10.6□□□□□ -0.71
VTA1-201ENST00000367621 EYA4O95677 639 aa10.6□□□□□ -0.71
VTA1-201ENST00000367621 IGHA2P01877 340 aa10.6□□□□□ -0.71
VTA1-201ENST00000367621 CYP11B2P19099 503 aa10.6□□□□□ -0.71
VTA1-201ENST00000367621 MAPK4P31152 587 aa10.6□□□□□ -0.71
VTA1-201ENST00000367621 KRT76Q01546 638 aa10.6□□□□□ -0.71
VTA1-201ENST00000367621 PDE4DQ08499 809 aa10.6□□□□□ -0.71
VTA1-201ENST00000367621 CRHR2Q13324 411 aa10.6□□□□□ -0.71
VTA1-201ENST00000367621 DHX8Q14562 1220 aaKnown RBP10.6□□□□□ -0.71
VTA1-201ENST00000367621 UGCGQ16739 394 aa10.6□□□□□ -0.71
VTA1-201ENST00000367621 GNPTABQ3T906 1256 aa10.6□□□□□ -0.71
VTA1-201ENST00000367621 KMT5BQ4FZB7 885 aa10.6□□□□□ -0.71
VTA1-201ENST00000367621 MORN1Q5T089 497 aa10.6□□□□□ -0.71
VTA1-201ENST00000367621 TMEM63BQ5T3F8 832 aa10.6□□□□□ -0.71
VTA1-201ENST00000367621 L1TD1Q5T7N2 865 aaKnown RBP10.6□□□□□ -0.71
VTA1-201ENST00000367621 WDR78Q5VTH9 848 aa10.6□□□□□ -0.71
VTA1-201ENST00000367621 ZNF746Q6NUN9 644 aaPredicted RBP10.6□□□□□ -0.71
VTA1-201ENST00000367621 ABHD15Q6UXT9 468 aa10.6□□□□□ -0.71
VTA1-201ENST00000367621 SEPT14Q6ZU15 432 aa10.6□□□□□ -0.71
VTA1-201ENST00000367621 MIER3Q7Z3K6 550 aa10.6□□□□□ -0.71
VTA1-201ENST00000367621 TPH2Q8IWU9 490 aa10.6□□□□□ -0.71
VTA1-201ENST00000367621 SYT2Q8N9I0 419 aaPredicted RBP10.6□□□□□ -0.71
VTA1-201ENST00000367621 BANK1Q8NDB2 785 aa10.6□□□□□ -0.71
VTA1-201ENST00000367621 USP6NLQ92738 828 aa10.6□□□□□ -0.71
VTA1-201ENST00000367621 CCDC34Q96HJ3 373 aa10.6□□□□□ -0.71
VTA1-201ENST00000367621 CDHR1Q96JP9 859 aa10.6□□□□□ -0.71
VTA1-201ENST00000367621 KATNBL1Q9H079 304 aa10.6□□□□□ -0.71
VTA1-201ENST00000367621 HSD3B7Q9H2F3 369 aa10.6□□□□□ -0.71
VTA1-201ENST00000367621 DNM3Q9UQ16 869 aa10.6□□□□□ -0.71
VTA1-201ENST00000367621 RBBP6Q7Z6E9 1792 aaKnown RBP10.6□□□□□ -0.71
VTA1-201ENST00000367621 NPHP3-ACAD11A0A0J9YXS1 232 aa10.59□□□□□ -0.71
VTA1-201ENST00000367621 FRMD3A2A2Y4 597 aa10.59□□□□□ -0.71
VTA1-201ENST00000367621 AOC2O75106 756 aa10.59□□□□□ -0.71
VTA1-201ENST00000367621 ATG7O95352 703 aa10.59□□□□□ -0.71
VTA1-201ENST00000367621 SNAI1O95863 264 aaPredicted RBP10.59□□□□□ -0.71
VTA1-201ENST00000367621 P4HBP07237 508 aaKnown RBP10.59□□□□□ -0.71
VTA1-201ENST00000367621 UBA1P22314 1058 aaKnown RBP10.59□□□□□ -0.71
VTA1-201ENST00000367621 CTGFP29279 349 aa10.59□□□□□ -0.71
VTA1-201ENST00000367621 JAK3P52333 1124 aa10.59□□□□□ -0.71
VTA1-201ENST00000367621 AMPD3Q01432 767 aa10.59□□□□□ -0.71
VTA1-201ENST00000367621 SREBF2Q12772 1141 aa10.59□□□□□ -0.71
VTA1-201ENST00000367621 ZNF658Q5TYW1 1059 aaPredicted RBP10.59□□□□□ -0.71
VTA1-201ENST00000367621 TAPT1Q6NXT6 567 aa10.59□□□□□ -0.71
VTA1-201ENST00000367621 CCDC62Q6P9F0 684 aa10.59□□□□□ -0.71
VTA1-201ENST00000367621 MAMDC4Q6UXC1 1216 aa10.59□□□□□ -0.71
VTA1-201ENST00000367621 SMYD4Q8IYR2 804 aaPredicted RBP10.59□□□□□ -0.71
VTA1-201ENST00000367621 MLKLQ8NB16 471 aa10.59□□□□□ -0.71
VTA1-201ENST00000367621 RDM1Q8NG50 284 aa10.59□□□□□ -0.71
VTA1-201ENST00000367621 NPLOC4Q8TAT6 608 aa10.59□□□□□ -0.71
VTA1-201ENST00000367621 NEK9Q8TD19 979 aa10.59□□□□□ -0.71
VTA1-201ENST00000367621 PIGOQ8TEQ8 1089 aa10.59□□□□□ -0.71
VTA1-201ENST00000367621 LXNQ9BS40 222 aa10.59□□□□□ -0.71
VTA1-201ENST00000367621 RUSC1Q9BVN2 902 aa10.59□□□□□ -0.71
VTA1-201ENST00000367621 DDX41Q9UJV9 622 aaKnown RBP10.59□□□□□ -0.71
VTA1-201ENST00000367621 GJD2Q9UKL4 321 aa10.59□□□□□ -0.71
VTA1-201ENST00000367621 DIS3Q9Y2L1 958 aaKnown RBP10.59□□□□□ -0.71
VTA1-201ENST00000367621 PVALEFA0A1B0GWK0 134 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 RBM47A0AV96 593 aaKnown RBP10.58□□□□□ -0.72
VTA1-201ENST00000367621 ASB14A6NK59 587 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 WDR64B1ANS9 1081 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 B4DLN1 442 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 CA12O43570 354 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 ZNF862O60290 1169 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 FARP2O94887 1054 aaPredicted RBP10.58□□□□□ -0.72
VTA1-201ENST00000367621 TGFB3P10600 412 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 YY1P25490 414 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 SFNP31947 248 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 APLP1P51693 650 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 ACTR2P61160 394 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 ASIC1P78348 528 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 STK4Q13043 487 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 GIT2Q14161 759 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 CT47A1Q5JQC4 288 aaPredicted RBP10.58□□□□□ -0.72
VTA1-201ENST00000367621 C1orf186Q6ZWK4 172 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 UNC13DQ70J99 1090 aa10.58□□□□□ -0.72
VTA1-201ENST00000367621 ARMCX2Q7L311 632 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms