RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 CCDC138Q96M89 665 aa9.58□□□□□ -0.88
SYNE1-209ENST00000367257 FAM129AQ9BZQ8 928 aa9.58□□□□□ -0.88
SYNE1-209ENST00000367257 EPB41L5Q9HCM4 733 aa9.58□□□□□ -0.88
SYNE1-209ENST00000367257 USP40Q9NVE5 1235 aa9.58□□□□□ -0.88
SYNE1-209ENST00000367257 ANKFY1Q9P2R3 1169 aa9.58□□□□□ -0.88
SYNE1-209ENST00000367257 NALCNQ8IZF0 1738 aa9.58□□□□□ -0.88
SYNE1-209ENST00000367257 MDM2Q00987 491 aaPredicted RBP9.58□□□□□ -0.88
SYNE1-209ENST00000367257 SCRN1Q12765 414 aa9.58□□□□□ -0.88
SYNE1-209ENST00000367257 PTCH1Q13635 1447 aa9.58□□□□□ -0.88
SYNE1-209ENST00000367257 TFDP2Q14188 446 aa9.58□□□□□ -0.88
SYNE1-209ENST00000367257 MAP3K15Q6ZN16 1313 aa9.58□□□□□ -0.88
SYNE1-209ENST00000367257 SYDE1Q6ZW31 735 aaPredicted RBP9.58□□□□□ -0.88
SYNE1-209ENST00000367257 NDUFAF2Q8N183 169 aa9.58□□□□□ -0.88
SYNE1-209ENST00000367257 MTBPQ96DY7 904 aa9.58□□□□□ -0.88
SYNE1-209ENST00000367257 NUDCD1Q96RS6 583 aa9.58□□□□□ -0.88
SYNE1-209ENST00000367257 DESI2Q9BSY9 194 aa9.58□□□□□ -0.88
SYNE1-209ENST00000367257 CLEC11AQ9Y240 323 aa9.58□□□□□ -0.88
SYNE1-209ENST00000367257 CSADQ9Y600 493 aa9.58□□□□□ -0.88
SYNE1-209ENST00000367257 TMEM232C9JQI7 657 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 BUB1O43683 1085 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 KDM1AO60341 852 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 SERPINI2O75830 405 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 FGAP02671 866 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 ATICP31939 592 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 POLGP54098 1239 aaPredicted RBP9.57□□□□□ -0.88
SYNE1-209ENST00000367257 DR1Q01658 176 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 KCTD16Q68DU8 428 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 ACSBG1Q96GR2 724 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 VPS39Q96JC1 886 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 TEX12Q9BXU0 123 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 CNGB3Q9NQW8 809 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 DNAJC17Q9NVM6 304 aaKnown RBP9.57□□□□□ -0.88
SYNE1-209ENST00000367257 CEP72Q9P209 647 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 CDK12Q9NYV4 1490 aaPredicted RBP9.57□□□□□ -0.88
SYNE1-209ENST00000367257 PVALEFA0A1B0GWK0 134 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 SPAG7O75391 227 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 KRT38O76015 456 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 TMCC1O94876 653 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 NOP14P78316 857 aaKnown RBP9.57□□□□□ -0.88
SYNE1-209ENST00000367257 SP4Q02446 784 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 RASSF7Q02833 373 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 ICA1Q05084 483 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 LONRF3Q496Y0 759 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 CERKLQ49MI3 558 aaPredicted RBP9.57□□□□□ -0.88
SYNE1-209ENST00000367257 GJC2Q5T442 439 aaPredicted RBP9.57□□□□□ -0.88
SYNE1-209ENST00000367257 CC2D2BQ6DHV5 1058 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 DNAJC24Q6P3W2 148 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 CLEC17AQ6ZS10 378 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 ZC3H18Q86VM9 953 aaKnown RBP9.57□□□□□ -0.88
SYNE1-209ENST00000367257 MAPKAPK5Q8IW41 473 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 SCYL3Q8IZE3 742 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 KCTD17Q8N5Z5 321 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 SPDYE1Q8NFV5 336 aaPredicted RBP9.57□□□□□ -0.88
SYNE1-209ENST00000367257 SCG3Q8WXD2 468 aaKnown RBP9.57□□□□□ -0.88
SYNE1-209ENST00000367257 CASP10Q92851 521 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 STAMBPL1Q96FJ0 436 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 ZBTB18Q99592 522 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 TRIM55Q9BYV6 548 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 RGL1Q9NZL6 768 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 TBC1D7Q9P0N9 293 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 MAN1B1Q9UKM7 699 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 STRIP2Q9ULQ0 834 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 XDHP47989 1333 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 SGK1O00141 431 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 MEFVO15553 781 aaPredicted RBP9.57□□□□□ -0.88
SYNE1-209ENST00000367257 CTIFO43310 598 aaKnown RBP9.57□□□□□ -0.88
SYNE1-209ENST00000367257 AP1G2O75843 785 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 GFPT2O94808 682 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 PDE8BO95263 885 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 TTLL1O95922 423 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 DHX9Q08211 1270 aaKnown RBP9.57□□□□□ -0.88
SYNE1-209ENST00000367257 RBL2Q08999 1139 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 IQCB1Q15051 598 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 MAPRE2Q15555 327 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 KRT24Q2M2I5 525 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 SLFN13Q68D06 897 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 ARMCX2Q7L311 632 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 CRLF3Q8IUI8 442 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 ENAHQ8N8S7 591 aaPredicted RBP9.57□□□□□ -0.88
SYNE1-209ENST00000367257 CNKSR1Q969H4 720 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 PSMB7Q99436 277 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 OSBPL5Q9H0X9 879 aaPredicted RBP9.57□□□□□ -0.88
SYNE1-209ENST00000367257 SLITRK6Q9H5Y7 841 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 KANSL2Q9H9L4 492 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 PKD2L1Q9P0L9 805 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 ESYT2A0FGR8 921 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 MFAP3LO75121 409 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 TJP3O95049 919 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 APOEP02649 317 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 ESRRAP11474 423 aaPredicted RBP9.57□□□□□ -0.88
SYNE1-209ENST00000367257 OCA2Q04671 838 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 THOC5Q13769 683 aaKnown RBP9.57□□□□□ -0.88
SYNE1-209ENST00000367257 TAF1BQ53T94 588 aaPredicted RBP9.57□□□□□ -0.88
SYNE1-209ENST00000367257 C16orf87Q6PH81 154 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 ENOSF1Q7L5Y1 443 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 KIAA2013Q8IYS2 634 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 EAF2Q96CJ1 260 aaPredicted RBP9.57□□□□□ -0.88
SYNE1-209ENST00000367257 TRIM62Q9BVG3 475 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 FOXP3Q9BZS1 431 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 TRIM45Q9H8W5 580 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms