RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 COL1A2P08123 1366 aa16.87■□□□□ 0.29
CTSD-202ENST00000367196 SMIM35A0A1B0GVV1 85 aa16.86■□□□□ 0.29
CTSD-202ENST00000367196 EPB41L2O43491 1005 aaKnown RBP16.86■□□□□ 0.29
CTSD-202ENST00000367196 HBP1O60381 514 aa16.86■□□□□ 0.29
CTSD-202ENST00000367196 ATG7O95352 703 aa16.86■□□□□ 0.29
CTSD-202ENST00000367196 RB1P06400 928 aa16.86■□□□□ 0.29
CTSD-202ENST00000367196 RPS6KB1P23443 525 aa16.86■□□□□ 0.29
CTSD-202ENST00000367196 ADD1P35611 737 aaKnown RBP16.86■□□□□ 0.29
CTSD-202ENST00000367196 PAK2Q13177 524 aa16.86■□□□□ 0.29
CTSD-202ENST00000367196 GPM6BQ13491 265 aa16.86■□□□□ 0.29
CTSD-202ENST00000367196 JAKMIP3Q5VZ66 844 aa16.86■□□□□ 0.29
CTSD-202ENST00000367196 C11orf84Q9BUA3 381 aaPredicted RBP16.86■□□□□ 0.29
CTSD-202ENST00000367196 OSBPL7Q9BZF2 842 aa16.86■□□□□ 0.29
CTSD-202ENST00000367196 UBE2ZQ9H832 354 aaPredicted RBP16.86■□□□□ 0.29
CTSD-202ENST00000367196 RNF216Q9NWF9 866 aaPredicted RBP16.86■□□□□ 0.29
CTSD-202ENST00000367196 TTC3P53804 2025 aa16.86■□□□□ 0.29
CTSD-202ENST00000367196 REV3LO60673 3130 aa16.85■□□□□ 0.29
CTSD-202ENST00000367196 IGKV6D-21A0A0A0MT36 114 aa16.85■□□□□ 0.29
CTSD-202ENST00000367196 DDX39AO00148 427 aaKnown RBP16.85■□□□□ 0.29
CTSD-202ENST00000367196 IPO5O00410 1097 aaKnown RBP16.85■□□□□ 0.29
CTSD-202ENST00000367196 PRPF3O43395 683 aaKnown RBP16.85■□□□□ 0.29
CTSD-202ENST00000367196 CTNNB1P35222 781 aa16.85■□□□□ 0.29
CTSD-202ENST00000367196 ODR4Q5SWX8 454 aa16.85■□□□□ 0.29
CTSD-202ENST00000367196 SMAP1Q8IYB5 467 aaPredicted RBP16.85■□□□□ 0.29
CTSD-202ENST00000367196 ATP8B4Q8TF62 1192 aa16.85■□□□□ 0.29
CTSD-202ENST00000367196 ZNF577Q9BSK1 485 aa16.85■□□□□ 0.29
CTSD-202ENST00000367196 C1QTNF1Q9BXJ1 281 aa16.85■□□□□ 0.29
CTSD-202ENST00000367196 RNF26Q9BY78 433 aaPredicted RBP16.85■□□□□ 0.29
CTSD-202ENST00000367196 AGXT2Q9BYV1 514 aa16.85■□□□□ 0.29
CTSD-202ENST00000367196 LMAN2LQ9H0V9 348 aa16.85■□□□□ 0.29
CTSD-202ENST00000367196 ZNF302Q9NR11 478 aa16.85■□□□□ 0.29
CTSD-202ENST00000367196 KDM3AQ9Y4C1 1321 aa16.85■□□□□ 0.29
CTSD-202ENST00000367196 FAM86B1E9PN63 330 aa16.84■□□□□ 0.29
CTSD-202ENST00000367196 C5orf67F2Z3F1 127 aa16.84■□□□□ 0.29
CTSD-202ENST00000367196 ENPP3O14638 875 aa16.84■□□□□ 0.29
CTSD-202ENST00000367196 FAM86B2P0C5J1 330 aa16.84■□□□□ 0.29
CTSD-202ENST00000367196 STAG3L1P0CL83 205 aa16.84■□□□□ 0.29
CTSD-202ENST00000367196 CPA1P15085 419 aa16.84■□□□□ 0.29
CTSD-202ENST00000367196 KRT76Q01546 638 aa16.84■□□□□ 0.29
CTSD-202ENST00000367196 BTG3Q14201 252 aaPredicted RBP16.84■□□□□ 0.29
CTSD-202ENST00000367196 PUS10Q3MIT2 529 aaKnown RBP16.84■□□□□ 0.29
CTSD-202ENST00000367196 ZNF746Q6NUN9 644 aaPredicted RBP16.84■□□□□ 0.29
CTSD-202ENST00000367196 PDXDC2PQ6P474 469 aa16.84■□□□□ 0.29
CTSD-202ENST00000367196 MTHFD1LQ6UB35 978 aa16.84■□□□□ 0.29
CTSD-202ENST00000367196 ABHD15Q6UXT9 468 aa16.84■□□□□ 0.29
CTSD-202ENST00000367196 BANK1Q8NDB2 785 aa16.84■□□□□ 0.29
CTSD-202ENST00000367196 NECAB3Q96P71 396 aaPredicted RBP16.84■□□□□ 0.29
CTSD-202ENST00000367196 CELF4Q9BZC1 486 aaKnown RBP16.84■□□□□ 0.29
CTSD-202ENST00000367196 NSUN3Q9H649 340 aaKnown RBP16.84■□□□□ 0.29
CTSD-202ENST00000367196 IGSF9BQ9UPX0 1349 aa16.84■□□□□ 0.29
CTSD-202ENST00000367196 MYH9P35579 1960 aaKnown RBP16.84■□□□□ 0.29
CTSD-202ENST00000367196 IGLV3-22A0A075B6J6 115 aa16.83■□□□□ 0.28
CTSD-202ENST00000367196 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.83■□□□□ 0.28
CTSD-202ENST00000367196 NCK2O43639 380 aa16.83■□□□□ 0.28
CTSD-202ENST00000367196 CCNE2O96020 404 aa16.83■□□□□ 0.28
CTSD-202ENST00000367196 CD52P31358 61 aa16.83■□□□□ 0.28
CTSD-202ENST00000367196 LEXMQ3ZCV2 418 aa16.83■□□□□ 0.28
CTSD-202ENST00000367196 ZNF484Q5JVG2 852 aa16.83■□□□□ 0.28
CTSD-202ENST00000367196 NPAS4Q8IUM7 802 aa16.83■□□□□ 0.28
CTSD-202ENST00000367196 CKAP2LQ8IYA6 745 aa16.83■□□□□ 0.28
CTSD-202ENST00000367196 TRIM22Q8IYM9 498 aa16.83■□□□□ 0.28
CTSD-202ENST00000367196 CRYGNQ8WXF5 182 aa16.83■□□□□ 0.28
CTSD-202ENST00000367196 CLP1Q92989 425 aaKnown RBP16.83■□□□□ 0.28
CTSD-202ENST00000367196 PLVAPQ9BX97 442 aa16.83■□□□□ 0.28
CTSD-202ENST00000367196 RC3H2Q9HBD1 1191 aaKnown RBP16.83■□□□□ 0.28
CTSD-202ENST00000367196 CEP131Q9UPN4 1083 aa16.83■□□□□ 0.28
CTSD-202ENST00000367196 FAM50BQ9Y247 325 aa16.83■□□□□ 0.28
CTSD-202ENST00000367196 LOXHD1Q8IVV2 1947 aa16.82■□□□□ 0.28
CTSD-202ENST00000367196 DGKIO75912 1065 aa16.82■□□□□ 0.28
CTSD-202ENST00000367196 PSAPP07602 524 aa16.82■□□□□ 0.28
CTSD-202ENST00000367196 KCNA5P22460 613 aa16.82■□□□□ 0.28
CTSD-202ENST00000367196 TMEM62Q0P6H9 643 aa16.82■□□□□ 0.28
CTSD-202ENST00000367196 PKN1Q16512 942 aa16.82■□□□□ 0.28
CTSD-202ENST00000367196 CCDC60Q8IWA6 550 aaPredicted RBP16.82■□□□□ 0.28
CTSD-202ENST00000367196 CMTR2Q8IYT2 770 aaKnown RBP16.82■□□□□ 0.28
CTSD-202ENST00000367196 TRAPPC12Q8WVT3 735 aa16.82■□□□□ 0.28
CTSD-202ENST00000367196 BBXQ8WY36 941 aaPredicted RBP16.82■□□□□ 0.28
CTSD-202ENST00000367196 FAM167AQ96KS9 214 aa16.82■□□□□ 0.28
CTSD-202ENST00000367196 C22orf23Q9BZE7 217 aa16.82■□□□□ 0.28
CTSD-202ENST00000367196 AGO3Q9H9G7 860 aaKnown RBP16.82■□□□□ 0.28
CTSD-202ENST00000367196 SH3GLB2Q9NR46 395 aa16.82■□□□□ 0.28
CTSD-202ENST00000367196 PADI3Q9ULW8 664 aa16.82■□□□□ 0.28
CTSD-202ENST00000367196 DHX15O43143 795 aaKnown RBP16.81■□□□□ 0.28
CTSD-202ENST00000367196 IFNAR1P17181 557 aa16.81■□□□□ 0.28
CTSD-202ENST00000367196 KLRC1P26715 233 aa16.81■□□□□ 0.28
CTSD-202ENST00000367196 BMPR1AP36894 532 aa16.81■□□□□ 0.28
CTSD-202ENST00000367196 PRR16Q569H4 304 aa16.81■□□□□ 0.28
CTSD-202ENST00000367196 NAALADL2Q58DX5 795 aa16.81■□□□□ 0.28
CTSD-202ENST00000367196 SWSAP1Q6NVH7 229 aa16.81■□□□□ 0.28
CTSD-202ENST00000367196 PHKBQ93100 1093 aa16.81■□□□□ 0.28
CTSD-202ENST00000367196 PPP2R3CQ969Q6 453 aa16.81■□□□□ 0.28
CTSD-202ENST00000367196 ZNF689Q96CS4 500 aaPredicted RBP16.81■□□□□ 0.28
CTSD-202ENST00000367196 PABPC5Q96DU9 382 aaKnown RBP16.81■□□□□ 0.28
CTSD-202ENST00000367196 SLC26A6Q9BXS9 759 aa16.81■□□□□ 0.28
CTSD-202ENST00000367196 LRFN2Q9ULH4 789 aa16.81■□□□□ 0.28
CTSD-202ENST00000367196 PCDHA10Q9Y5I2 948 aa16.81■□□□□ 0.28
CTSD-202ENST00000367196 WDR64B1ANS9 1081 aa16.8■□□□□ 0.28
CTSD-202ENST00000367196 CPLX1O14810 134 aa16.8■□□□□ 0.28
CTSD-202ENST00000367196 RPS6KA5O75582 802 aa16.8■□□□□ 0.28
CTSD-202ENST00000367196 CIITAP33076 1130 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms