RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 ATP8A1Q9Y2Q0 1164 aa14.84□□□□□ -0.03
PRKN-205ENST00000366897 ABCB11O95342 1321 aa14.84□□□□□ -0.03
PRKN-205ENST00000366897 SCN7AQ01118 1682 aa14.84□□□□□ -0.03
PRKN-205ENST00000366897 MYH4Q9Y623 1939 aa14.84□□□□□ -0.03
PRKN-205ENST00000366897 RAD21O60216 631 aa14.84□□□□□ -0.03
PRKN-205ENST00000366897 NR2F2P24468 414 aa14.84□□□□□ -0.03
PRKN-205ENST00000366897 SMTNP53814 917 aa14.84□□□□□ -0.03
PRKN-205ENST00000366897 BYSLQ13895 437 aaKnown RBP14.84□□□□□ -0.03
PRKN-205ENST00000366897 TMEM119Q4V9L6 283 aa14.84□□□□□ -0.03
PRKN-205ENST00000366897 PPP4R3AQ6IN85 833 aa14.84□□□□□ -0.03
PRKN-205ENST00000366897 PEX26Q7Z412 305 aa14.84□□□□□ -0.03
PRKN-205ENST00000366897 IRF2BP2Q7Z5L9 587 aa14.84□□□□□ -0.03
PRKN-205ENST00000366897 SPATS2Q86XZ4 545 aaKnown RBP14.84□□□□□ -0.03
PRKN-205ENST00000366897 PPP1R1BQ9UD71 204 aaPredicted RBP14.84□□□□□ -0.03
PRKN-205ENST00000366897 PGRMC1O00264 195 aaKnown RBP14.83□□□□□ -0.03
PRKN-205ENST00000366897 MEIS1O00470 390 aa14.83□□□□□ -0.03
PRKN-205ENST00000366897 CDR1P51861 262 aa14.83□□□□□ -0.03
PRKN-205ENST00000366897 UBAP2Q5T6F2 1119 aaKnown RBP14.83□□□□□ -0.03
PRKN-205ENST00000366897 EMC10Q5UCC4 262 aa14.83□□□□□ -0.03
PRKN-205ENST00000366897 SPTY2D1Q68D10 685 aaPredicted RBP14.83□□□□□ -0.03
PRKN-205ENST00000366897 TTBK2Q6IQ55 1244 aa14.83□□□□□ -0.03
PRKN-205ENST00000366897 YTHDF3Q7Z739 585 aaKnown RBP14.83□□□□□ -0.03
PRKN-205ENST00000366897 FAM228AQ86W67 206 aa14.83□□□□□ -0.03
PRKN-205ENST00000366897 EMILIN3Q9NT22 766 aa14.83□□□□□ -0.03
PRKN-205ENST00000366897 DDX25Q9UHL0 483 aaKnown RBP14.83□□□□□ -0.03
PRKN-205ENST00000366897 NAGPAQ9UK23 515 aa14.83□□□□□ -0.03
PRKN-205ENST00000366897 HDAC9Q9UKV0 1011 aa14.83□□□□□ -0.03
PRKN-205ENST00000366897 ATXN2Q99700 1313 aaKnown RBP14.83□□□□□ -0.03
PRKN-205ENST00000366897 LAMB1P07942 1786 aa14.83□□□□□ -0.04
PRKN-205ENST00000366897 TLDC2A0PJX2 215 aa14.83□□□□□ -0.04
PRKN-205ENST00000366897 FRMD3A2A2Y4 597 aa14.83□□□□□ -0.04
PRKN-205ENST00000366897 CHUKO15111 745 aa14.83□□□□□ -0.04
PRKN-205ENST00000366897 UCHL3P15374 230 aa14.83□□□□□ -0.04
PRKN-205ENST00000366897 BTDP43251 543 aa14.83□□□□□ -0.04
PRKN-205ENST00000366897 PPP2R2AP63151 447 aa14.83□□□□□ -0.04
PRKN-205ENST00000366897 CYB5D1Q6P9G0 228 aa14.83□□□□□ -0.04
PRKN-205ENST00000366897 CPLX4Q7Z7G2 160 aa14.83□□□□□ -0.04
PRKN-205ENST00000366897 DAAM2Q86T65 1068 aa14.83□□□□□ -0.04
PRKN-205ENST00000366897 LRRC57Q8N9N7 239 aa14.83□□□□□ -0.04
PRKN-205ENST00000366897 NLRP3Q96P20 1036 aa14.83□□□□□ -0.04
PRKN-205ENST00000366897 LZTS2Q9BRK4 669 aa14.83□□□□□ -0.04
PRKN-205ENST00000366897 RAB34Q9BZG1 259 aa14.83□□□□□ -0.04
PRKN-205ENST00000366897 GOPCQ9HD26 462 aa14.83□□□□□ -0.04
PRKN-205ENST00000366897 AIPL1Q9NZN9 384 aa14.83□□□□□ -0.04
PRKN-205ENST00000366897 PNMA2Q9UL42 364 aa14.83□□□□□ -0.04
PRKN-205ENST00000366897 SNED1Q8TER0 1413 aa14.83□□□□□ -0.04
PRKN-205ENST00000366897 POTEFA5A3E0 1075 aa14.83□□□□□ -0.04
PRKN-205ENST00000366897 CCDC172P0C7W6 258 aa14.83□□□□□ -0.04
PRKN-205ENST00000366897 POTEIP0CG38 1075 aa14.83□□□□□ -0.04
PRKN-205ENST00000366897 POTEGQ6S5H5 508 aa14.83□□□□□ -0.04
PRKN-205ENST00000366897 POTEEQ6S8J3 1075 aa14.83□□□□□ -0.04
PRKN-205ENST00000366897 NBPF5PQ86XG9 351 aaPredicted RBP14.83□□□□□ -0.04
PRKN-205ENST00000366897 ARFGAP2Q8N6H7 521 aa14.83□□□□□ -0.04
PRKN-205ENST00000366897 TPCN2Q8NHX9 752 aa14.83□□□□□ -0.04
PRKN-205ENST00000366897 SLC16A10Q8TF71 515 aa14.83□□□□□ -0.04
PRKN-205ENST00000366897 SYN2Q92777 582 aaPredicted RBP14.83□□□□□ -0.04
PRKN-205ENST00000366897 LRRC45Q96CN5 670 aa14.83□□□□□ -0.04
PRKN-205ENST00000366897 SGIP1Q9BQI5 828 aa14.83□□□□□ -0.04
PRKN-205ENST00000366897 PAGR1Q9BTK6 254 aa14.83□□□□□ -0.04
PRKN-205ENST00000366897 OSGEPQ9NPF4 335 aa14.83□□□□□ -0.04
PRKN-205ENST00000366897 PCDHA12Q9UN75 941 aa14.83□□□□□ -0.04
PRKN-205ENST00000366897 GNPATO15228 680 aa14.82□□□□□ -0.04
PRKN-205ENST00000366897 BAG3O95817 575 aa14.82□□□□□ -0.04
PRKN-205ENST00000366897 SHBGP04278 402 aa14.82□□□□□ -0.04
PRKN-205ENST00000366897 IFFO1Q0D2I5 559 aa14.82□□□□□ -0.04
PRKN-205ENST00000366897 ZNF211Q13398 564 aaPredicted RBP14.82□□□□□ -0.04
PRKN-205ENST00000366897 NFIXQ14938 502 aa14.82□□□□□ -0.04
PRKN-205ENST00000366897 ANKRD20A8PQ5CZ79 823 aa14.82□□□□□ -0.04
PRKN-205ENST00000366897 TEX11Q8IYF3 940 aa14.82□□□□□ -0.04
PRKN-205ENST00000366897 FUKQ8N0W3 1084 aa14.82□□□□□ -0.04
PRKN-205ENST00000366897 U2AF1L4Q8WU68 220 aaKnown RBP14.82□□□□□ -0.04
PRKN-205ENST00000366897 NUCKS1Q9H1E3 243 aaKnown RBP14.82□□□□□ -0.04
PRKN-205ENST00000366897 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.82□□□□□ -0.04
PRKN-205ENST00000366897 PPP1R11O60927 126 aaPredicted RBP14.82□□□□□ -0.04
PRKN-205ENST00000366897 PLA2G4BP0C869 781 aa14.82□□□□□ -0.04
PRKN-205ENST00000366897 ABCB4P21439 1286 aa14.82□□□□□ -0.04
PRKN-205ENST00000366897 TMC3Q7Z5M5 1100 aa14.82□□□□□ -0.04
PRKN-205ENST00000366897 CACNA2D3Q8IZS8 1091 aa14.82□□□□□ -0.04
PRKN-205ENST00000366897 GIMAP7Q8NHV1 300 aa14.82□□□□□ -0.04
PRKN-205ENST00000366897 FAM212AQ96EL1 285 aa14.82□□□□□ -0.04
PRKN-205ENST00000366897 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.82□□□□□ -0.04
PRKN-205ENST00000366897 KCTD10Q9H3F6 313 aa14.82□□□□□ -0.04
PRKN-205ENST00000366897 TPX2Q9ULW0 747 aaKnown RBP14.82□□□□□ -0.04
PRKN-205ENST00000366897 CAND2O75155 1236 aa14.81□□□□□ -0.04
PRKN-205ENST00000366897 FGGP02679 453 aa14.81□□□□□ -0.04
PRKN-205ENST00000366897 SCTRP47872 440 aa14.81□□□□□ -0.04
PRKN-205ENST00000366897 CASP4P49662 377 aa14.81□□□□□ -0.04
PRKN-205ENST00000366897 DDR1Q08345 913 aa14.81□□□□□ -0.04
PRKN-205ENST00000366897 PSMD2Q13200 908 aa14.81□□□□□ -0.04
PRKN-205ENST00000366897 MKRN4PQ13434 485 aaPredicted RBP14.81□□□□□ -0.04
PRKN-205ENST00000366897 CUL1Q13616 776 aa14.81□□□□□ -0.04
PRKN-205ENST00000366897 NEDD1Q8NHV4 660 aa14.81□□□□□ -0.04
PRKN-205ENST00000366897 GLG1Q92896 1179 aa14.81□□□□□ -0.04
PRKN-205ENST00000366897 BMP2KQ9NSY1 1161 aaPredicted RBP14.81□□□□□ -0.04
PRKN-205ENST00000366897 PCDHA2Q9Y5H9 948 aa14.81□□□□□ -0.04
PRKN-205ENST00000366897 USP17L15C9J2P7 530 aa14.81□□□□□ -0.04
PRKN-205ENST00000366897 USP17L13C9JLJ4 530 aa14.81□□□□□ -0.04
PRKN-205ENST00000366897 USP17L11C9JVI0 530 aa14.81□□□□□ -0.04
PRKN-205ENST00000366897 USP17L18D6R9N7 530 aa14.81□□□□□ -0.04
PRKN-205ENST00000366897 USP17L22D6RA61 530 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms