RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 STXBP5LQ9Y2K9 1186 aa9.6□□□□□ -0.87
H3F3A-201ENST00000366813 STK10O94804 968 aaKnown RBP9.59□□□□□ -0.87
H3F3A-201ENST00000366813 NBPF9Q3BBW0 867 aa9.59□□□□□ -0.87
H3F3A-201ENST00000366813 RUFY4Q6ZNE9 571 aa9.59□□□□□ -0.87
H3F3A-201ENST00000366813 TTC5Q8N0Z6 440 aa9.59□□□□□ -0.87
H3F3A-201ENST00000366813 UBXN4Q92575 508 aa9.59□□□□□ -0.87
H3F3A-201ENST00000366813 ZNF333Q96JL9 665 aa9.59□□□□□ -0.87
H3F3A-201ENST00000366813 HDAC8Q9BY41 377 aa9.59□□□□□ -0.87
H3F3A-201ENST00000366813 VPS33BQ9H267 617 aa9.59□□□□□ -0.87
H3F3A-201ENST00000366813 ZNF552Q9H707 407 aaPredicted RBP9.59□□□□□ -0.87
H3F3A-201ENST00000366813 GGA3Q9NZ52 723 aa9.59□□□□□ -0.87
H3F3A-201ENST00000366813 TCFL5Q9UL49 500 aa9.59□□□□□ -0.87
H3F3A-201ENST00000366813 ABCC12Q96J65 1359 aa9.59□□□□□ -0.87
H3F3A-201ENST00000366813 MRC1P22897 1456 aa9.59□□□□□ -0.87
H3F3A-201ENST00000366813 PEX10O60683 326 aa9.58□□□□□ -0.88
H3F3A-201ENST00000366813 CLEC3AO75596 197 aa9.58□□□□□ -0.88
H3F3A-201ENST00000366813 GALK1P51570 392 aa9.58□□□□□ -0.88
H3F3A-201ENST00000366813 LINC00310P59036 64 aa9.58□□□□□ -0.88
H3F3A-201ENST00000366813 DLG4P78352 724 aa9.58□□□□□ -0.88
H3F3A-201ENST00000366813 CAP1Q01518 475 aa9.58□□□□□ -0.88
H3F3A-201ENST00000366813 TMC3Q7Z5M5 1100 aa9.58□□□□□ -0.88
H3F3A-201ENST00000366813 TAB3Q8N5C8 712 aaPredicted RBP9.58□□□□□ -0.88
H3F3A-201ENST00000366813 CD99L2Q8TCZ2 262 aa9.58□□□□□ -0.88
H3F3A-201ENST00000366813 DPF2Q92785 391 aa9.58□□□□□ -0.88
H3F3A-201ENST00000366813 TEX13AQ9BXU3 409 aaPredicted RBP9.58□□□□□ -0.88
H3F3A-201ENST00000366813 IRF2BPLQ9H1B7 796 aa9.58□□□□□ -0.88
H3F3A-201ENST00000366813 PRKAG3Q9UGI9 489 aa9.58□□□□□ -0.88
H3F3A-201ENST00000366813 ZNF652Q9Y2D9 606 aa9.58□□□□□ -0.88
H3F3A-201ENST00000366813 HEG1Q9ULI3 1381 aa9.58□□□□□ -0.88
H3F3A-201ENST00000366813 SPTBN5Q9NRC6 3674 aaKnown RBP9.58□□□□□ -0.88
H3F3A-201ENST00000366813 PSMD14O00487 310 aa9.57□□□□□ -0.88
H3F3A-201ENST00000366813 TNFRSF10CO14798 259 aa9.57□□□□□ -0.88
H3F3A-201ENST00000366813 IGSF3O75054 1194 aa9.57□□□□□ -0.88
H3F3A-201ENST00000366813 POLR2BP30876 1174 aaKnown RBP9.57□□□□□ -0.88
H3F3A-201ENST00000366813 FKBP1BP68106 108 aa9.57□□□□□ -0.88
H3F3A-201ENST00000366813 RBL2Q08999 1139 aa9.57□□□□□ -0.88
H3F3A-201ENST00000366813 KIAA2012Q0VF49 1180 aa9.57□□□□□ -0.88
H3F3A-201ENST00000366813 LCE4AQ5TA78 99 aa9.57□□□□□ -0.88
H3F3A-201ENST00000366813 SCAF8Q9UPN6 1271 aaKnown RBP9.57□□□□□ -0.88
H3F3A-201ENST00000366813 ZNF281Q9Y2X9 895 aa9.57□□□□□ -0.88
H3F3A-201ENST00000366813 KIF7Q2M1P5 1343 aa9.57□□□□□ -0.88
H3F3A-201ENST00000366813 OR14I1A6ND48 311 aa9.56□□□□□ -0.88
H3F3A-201ENST00000366813 SMAD7O15105 426 aaKnown RBP9.56□□□□□ -0.88
H3F3A-201ENST00000366813 SEMA7AO75326 666 aa9.56□□□□□ -0.88
H3F3A-201ENST00000366813 SYPP08247 313 aa9.56□□□□□ -0.88
H3F3A-201ENST00000366813 ACRP10323 421 aa9.56□□□□□ -0.88
H3F3A-201ENST00000366813 GUCY2CP25092 1073 aa9.56□□□□□ -0.88
H3F3A-201ENST00000366813 SREBF2Q12772 1141 aa9.56□□□□□ -0.88
H3F3A-201ENST00000366813 HLFQ16534 295 aa9.56□□□□□ -0.88
H3F3A-201ENST00000366813 PRAMEF18Q5VWM3 479 aa9.56□□□□□ -0.88
H3F3A-201ENST00000366813 CEP128Q6ZU80 1094 aa9.56□□□□□ -0.88
H3F3A-201ENST00000366813 C19orf47Q8N9M1 422 aaKnown RBP9.56□□□□□ -0.88
H3F3A-201ENST00000366813 SUPT20HQ8NEM7 779 aa9.56□□□□□ -0.88
H3F3A-201ENST00000366813 RBM17Q96I25 401 aaKnown RBP9.56□□□□□ -0.88
H3F3A-201ENST00000366813 CRAMP1Q96RY5 1269 aa9.56□□□□□ -0.88
H3F3A-201ENST00000366813 G6PC3Q9BUM1 346 aa9.56□□□□□ -0.88
H3F3A-201ENST00000366813 RTFDC1Q9BY42 306 aaPredicted RBP9.56□□□□□ -0.88
H3F3A-201ENST00000366813 MTMR10Q9NXD2 777 aa9.56□□□□□ -0.88
H3F3A-201ENST00000366813 ATP6V0A2Q9Y487 856 aa9.56□□□□□ -0.88
H3F3A-201ENST00000366813 TEX51A0A1B0GUA7 166 aa9.56□□□□□ -0.88
H3F3A-201ENST00000366813 MYOCOSA0A1B0GUC4 107 aa9.56□□□□□ -0.88
H3F3A-201ENST00000366813 A0A1W2PPC1 479 aa9.56□□□□□ -0.88
H3F3A-201ENST00000366813 USP2O75604 605 aaPredicted RBP9.56□□□□□ -0.88
H3F3A-201ENST00000366813 CCNFP41002 786 aa9.56□□□□□ -0.88
H3F3A-201ENST00000366813 CASP7P55210 303 aa9.56□□□□□ -0.88
H3F3A-201ENST00000366813 TNNI3KQ59H18 835 aa9.56□□□□□ -0.88
H3F3A-201ENST00000366813 ADGRF1Q5T601 910 aa9.56□□□□□ -0.88
H3F3A-201ENST00000366813 DPP8Q6V1X1 898 aaPredicted RBP9.56□□□□□ -0.88
H3F3A-201ENST00000366813 SHISA4Q96DD7 197 aa9.56□□□□□ -0.88
H3F3A-201ENST00000366813 ERO1AQ96HE7 468 aa9.56□□□□□ -0.88
H3F3A-201ENST00000366813 ZNF512BQ96KM6 892 aaPredicted RBP9.56□□□□□ -0.88
H3F3A-201ENST00000366813 SLC9A7Q96T83 725 aa9.56□□□□□ -0.88
H3F3A-201ENST00000366813 TMX4Q9H1E5 349 aaPredicted RBP9.56□□□□□ -0.88
H3F3A-201ENST00000366813 STAP2Q9UGK3 403 aa9.56□□□□□ -0.88
H3F3A-201ENST00000366813 USP16Q9Y5T5 823 aa9.56□□□□□ -0.88
H3F3A-201ENST00000366813 TTC28Q96AY4 2481 aa9.55□□□□□ -0.88
H3F3A-201ENST00000366813 PRAMEF1O95521 474 aa9.55□□□□□ -0.88
H3F3A-201ENST00000366813 PLA2G5P39877 138 aa9.55□□□□□ -0.88
H3F3A-201ENST00000366813 KIR2DL1P43626 348 aaPredicted RBP9.55□□□□□ -0.88
H3F3A-201ENST00000366813 KIR2DL2P43627 348 aaPredicted RBP9.55□□□□□ -0.88
H3F3A-201ENST00000366813 SNW1Q13573 536 aaKnown RBP9.55□□□□□ -0.88
H3F3A-201ENST00000366813 SLC9C1Q4G0N8 1177 aa9.55□□□□□ -0.88
H3F3A-201ENST00000366813 ZNF790Q6PG37 636 aa9.55□□□□□ -0.88
H3F3A-201ENST00000366813 ANKS3Q6ZW76 656 aa9.55□□□□□ -0.88
H3F3A-201ENST00000366813 MAP6Q96JE9 813 aa9.55□□□□□ -0.88
H3F3A-201ENST00000366813 SGPP1Q9BX95 441 aa9.55□□□□□ -0.88
H3F3A-201ENST00000366813 PRDM14Q9GZV8 571 aa9.55□□□□□ -0.88
H3F3A-201ENST00000366813 FBXL21Q9UKT6 434 aa9.55□□□□□ -0.88
H3F3A-201ENST00000366813 CNOT6Q9ULM6 557 aaKnown RBP9.55□□□□□ -0.88
H3F3A-201ENST00000366813 PTCH2Q9Y6C5 1203 aa9.55□□□□□ -0.88
H3F3A-201ENST00000366813 UBR2Q8IWV8 1755 aa9.55□□□□□ -0.88
H3F3A-201ENST00000366813 KLF4O43474 513 aa9.54□□□□□ -0.88
H3F3A-201ENST00000366813 LILRA6Q6PI73 481 aa9.54□□□□□ -0.88
H3F3A-201ENST00000366813 NLRX1Q86UT6 975 aa9.54□□□□□ -0.88
H3F3A-201ENST00000366813 CKAP2LQ8IYA6 745 aa9.54□□□□□ -0.88
H3F3A-201ENST00000366813 DNAJC2Q99543 621 aaKnown RBP9.54□□□□□ -0.88
H3F3A-201ENST00000366813 MKRN2Q9H000 416 aaKnown RBP9.54□□□□□ -0.88
H3F3A-201ENST00000366813 ZNF609O15014 1411 aa9.53□□□□□ -0.88
H3F3A-201ENST00000366813 RIC1Q4ADV7 1423 aa9.53□□□□□ -0.88
H3F3A-201ENST00000366813 A0A1W2PQH9 124 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms