RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 IFNL2Q8IZJ0 200 aa11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 ERP27Q96DN0 273 aa11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 HACD3Q9P035 362 aa11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 CA4P22748 312 aa11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 A0A1W2PQ27 194 aa11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 A0A1W2PQ64 194 aa11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 A0A1W2PQD8 194 aa11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 E2F6O75461 281 aa11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 ENO1P06733 434 aaKnown RBP11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 GARSP41250 739 aaKnown RBP11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 TCP10Q12799 353 aa11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 TFCP2Q12800 502 aa11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 SARM1Q6SZW1 724 aa11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 MDM1Q8TC05 714 aa11.85□□□□□ -0.51
CDC42BPA-205ENST00000366769 LMBR1LQ6UX01 489 aa11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 COPS6Q7L5N1 327 aa11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 PHACTR1Q9C0D0 580 aa11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 ADARP55265 1226 aaKnown RBP11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 ARHGEF25Q86VW2 580 aa11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 WDR48Q8TAF3 677 aa11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 CDV3Q9UKY7 258 aaKnown RBP11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 GRM8O00222 908 aa11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 YWHAEP62258 255 aaKnown RBP11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 ACCSLQ4AC99 568 aa11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 SMCR8Q8TEV9 937 aaPredicted RBP11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 ZNF483Q8TF39 744 aaPredicted RBP11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 ESRRBO95718 433 aa11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 MYCBPAPQ8TBZ2 947 aa11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 NAF1Q96HR8 494 aaKnown RBP11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 NPHS2Q9NP85 383 aa11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 ARL2BPQ9Y2Y0 163 aa11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 PCDHB13Q9Y5F0 798 aa11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 B4E1Z4 1266 aa11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 ASPHQ12797 758 aa11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 PUM3Q15397 648 aaKnown RBP11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 ARHGEF38Q9NXL2 777 aa11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 TEX14Q8IWB6 1497 aa11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 A0A0D9SFI3 127 aa11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 TOM1O60784 492 aa11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 PLIN5Q00G26 463 aa11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 KDSRQ06136 332 aa11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 TRIM60Q495X7 471 aa11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 RSRC2Q7L4I2 434 aaKnown RBP11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 OR2W6PQ8NHA6 318 aa11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 EFHD1Q9BUP0 239 aa11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 USP15Q9Y4E8 981 aaPredicted RBP11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 RIMS2Q9UQ26 1411 aa11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 AGGF1Q8N302 714 aaeCLIP11.84□□□□□ -0.519e-7■■□□□ 13.8
CDC42BPA-205ENST00000366769 ZNF180Q9UJW8 692 aa11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 RPAP1Q9BWH6 1393 aaPredicted RBP11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 TAF4O00268 1085 aa11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 IKBKBO14920 756 aa11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 PPP2R5EQ16537 467 aa11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 ARPP21Q9UBL0 812 aaPredicted RBP11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 PHF8Q9UPP1 1060 aa11.84□□□□□ -0.51
CDC42BPA-205ENST00000366769 CCDC189A1A4V9 331 aa11.83□□□□□ -0.51
CDC42BPA-205ENST00000366769 CARSP49589 748 aaKnown RBP11.83□□□□□ -0.51
CDC42BPA-205ENST00000366769 PDZD4Q76G19 769 aaPredicted RBP11.83□□□□□ -0.51
CDC42BPA-205ENST00000366769 MBD4O95243 580 aa11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 STX1BP61266 288 aa11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 OTULINQ96BN8 352 aa11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 IRX2Q9BZI1 471 aaPredicted RBP11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 ZBED4O75132 1171 aa11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 RFWD2Q8NHY2 731 aa11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 DEPTORQ8TB45 409 aa11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 SERPINB10P48595 397 aa11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 RINT1Q6NUQ1 792 aa11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 USP33Q8TEY7 942 aa11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 EZH1Q92800 747 aaPredicted RBP11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 RUNDC3BQ96NL0 473 aa11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 TYW5A2RUC4 315 aaKnown RBP11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 RPS6KA3P51812 740 aa11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 PDE1BQ01064 536 aa11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 ERLEC1Q96DZ1 483 aa11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 SYCE1LA8MT33 242 aa11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 UFL1O94874 794 aa11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 PRAMEP78395 509 aa11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 GOLGA8CPA6NN73 597 aa11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 AHCYL1O43865 530 aa11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 MAPK11Q15759 364 aa11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 KRT28Q7Z3Y7 464 aa11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 DDHD1Q8NEL9 900 aa11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 EYA3Q99504 573 aa11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 RBMX2Q9Y388 322 aaKnown RBP11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 CFBP00751 764 aa11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 MYCP01106 439 aaPredicted RBP11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 EIF3BP55884 814 aaKnown RBP11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 ADCK5Q3MIX3 580 aa11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 NOSTRINQ8IVI9 506 aa11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 RBM46Q8TBY0 533 aaKnown RBP11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 LARGE1O95461 756 aa11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 VCAM1P19320 739 aa11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 APLFQ8IW19 511 aaPredicted RBP11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 SLC26A7Q8TE54 656 aa11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 MS4A14Q96JA4 679 aa11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 GSDMAQ96QA5 445 aa11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 SYTL2Q9HCH5 934 aa11.83□□□□□ -0.52
CDC42BPA-205ENST00000366769 COPS2P61201 443 aa11.82□□□□□ -0.52
CDC42BPA-205ENST00000366769 SPARCL1Q14515 664 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms