RNA–Protein interactions for RNA: ENST00000364700.1

RNU4-56P-201, Transcript of RNA, U4 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU4-56P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-56P-201ENST00000364700 SARSP49591 514 aaKnown RBP3.4□□□□□ -1.87
RNU4-56P-201ENST00000364700 NEK4P51957 841 aa3.4□□□□□ -1.87
RNU4-56P-201ENST00000364700 ERVK-21P61565 698 aa3.4□□□□□ -1.87
RNU4-56P-201ENST00000364700 RBM10P98175 930 aaKnown RBP3.4□□□□□ -1.87
RNU4-56P-201ENST00000364700 STRN3Q13033 797 aa3.4□□□□□ -1.87
RNU4-56P-201ENST00000364700 MOGSQ13724 837 aa3.4□□□□□ -1.87
RNU4-56P-201ENST00000364700 BRDTQ58F21 947 aaPredicted RBP3.4□□□□□ -1.87
RNU4-56P-201ENST00000364700 ARHGAP36Q6ZRI8 547 aa3.4□□□□□ -1.87
RNU4-56P-201ENST00000364700 NECAB2Q7Z6G3 386 aa3.4□□□□□ -1.87
RNU4-56P-201ENST00000364700 ZNF761Q86XN6 746 aaPredicted RBP3.4□□□□□ -1.87
RNU4-56P-201ENST00000364700 PROSER1Q86XN7 944 aa3.4□□□□□ -1.87
RNU4-56P-201ENST00000364700 PTRH1Q86Y79 214 aaKnown RBP3.4□□□□□ -1.87
RNU4-56P-201ENST00000364700 TTLL11Q8NHH1 800 aa3.4□□□□□ -1.87
RNU4-56P-201ENST00000364700 CHTF18Q8WVB6 975 aa3.4□□□□□ -1.87
RNU4-56P-201ENST00000364700 CLEC4DQ8WXI8 215 aa3.4□□□□□ -1.87
RNU4-56P-201ENST00000364700 TRMT2BQ96GJ1 504 aaKnown RBP3.4□□□□□ -1.87
RNU4-56P-201ENST00000364700 ASPSCR1Q9BZE9 553 aa3.4□□□□□ -1.87
RNU4-56P-201ENST00000364700 SMOC1Q9H4F8 434 aa3.4□□□□□ -1.87
RNU4-56P-201ENST00000364700 ZMAT4Q9H898 229 aa3.4□□□□□ -1.87
RNU4-56P-201ENST00000364700 VTA1Q9NP79 307 aa3.4□□□□□ -1.87
RNU4-56P-201ENST00000364700 EMC7Q9NPA0 242 aa3.4□□□□□ -1.87
RNU4-56P-201ENST00000364700 SPTLC3Q9NUV7 552 aa3.4□□□□□ -1.87
RNU4-56P-201ENST00000364700 OXSMQ9NWU1 459 aa3.4□□□□□ -1.87
RNU4-56P-201ENST00000364700 ASH2LQ9UBL3 628 aa3.4□□□□□ -1.87
RNU4-56P-201ENST00000364700 DBR1Q9UK59 544 aaKnown RBP3.4□□□□□ -1.87
RNU4-56P-201ENST00000364700 WASF3Q9UPY6 502 aa3.4□□□□□ -1.87
RNU4-56P-201ENST00000364700 SIT1Q9Y3P8 196 aa3.4□□□□□ -1.87
RNU4-56P-201ENST00000364700 PTPDC1A2A3K4 754 aa3.39□□□□□ -1.87
RNU4-56P-201ENST00000364700 BRINP1O60477 761 aa3.39□□□□□ -1.87
RNU4-56P-201ENST00000364700 FKBP9O95302 570 aa3.39□□□□□ -1.87
RNU4-56P-201ENST00000364700 PLATP00750 562 aa3.39□□□□□ -1.87
RNU4-56P-201ENST00000364700 LTFP02788 710 aa3.39□□□□□ -1.87
RNU4-56P-201ENST00000364700 C4BPAP04003 597 aaKnown RBP3.39□□□□□ -1.87
RNU4-56P-201ENST00000364700 SDHAP31040 664 aa3.39□□□□□ -1.87
RNU4-56P-201ENST00000364700 FLT3P36888 993 aa3.39□□□□□ -1.87
RNU4-56P-201ENST00000364700 DNM2P50570 870 aa3.39□□□□□ -1.87
RNU4-56P-201ENST00000364700 PHC1P78364 1004 aa3.39□□□□□ -1.87
RNU4-56P-201ENST00000364700 SMAD3P84022 425 aaKnown RBP3.39□□□□□ -1.87
RNU4-56P-201ENST00000364700 MTMR1Q13613 665 aa3.39□□□□□ -1.87
RNU4-56P-201ENST00000364700 SLC9A5Q14940 896 aa3.39□□□□□ -1.87
RNU4-56P-201ENST00000364700 SMAD2Q15796 467 aaKnown RBP3.39□□□□□ -1.87
RNU4-56P-201ENST00000364700 ARHGAP44Q17R89 818 aa3.39□□□□□ -1.87
RNU4-56P-201ENST00000364700 FAM47CQ5HY64 1035 aa3.39□□□□□ -1.87
RNU4-56P-201ENST00000364700 ESRP1Q6NXG1 681 aaKnown RBP3.39□□□□□ -1.87
RNU4-56P-201ENST00000364700 UBE2R2Q712K3 238 aaPredicted RBP3.39□□□□□ -1.87
RNU4-56P-201ENST00000364700 KCTD1Q719H9 257 aa3.39□□□□□ -1.87
RNU4-56P-201ENST00000364700 FKBP9P1Q75LS8 142 aa3.39□□□□□ -1.87
RNU4-56P-201ENST00000364700 MIB1Q86YT6 1006 aa3.39□□□□□ -1.87
RNU4-56P-201ENST00000364700 EFHBQ8N7U6 833 aa3.39□□□□□ -1.87
RNU4-56P-201ENST00000364700 CLRN3Q8NCR9 226 aa3.39□□□□□ -1.87
RNU4-56P-201ENST00000364700 PHOSPHO1Q8TCT1 267 aa3.39□□□□□ -1.87
RNU4-56P-201ENST00000364700 ALG3Q92685 438 aa3.39□□□□□ -1.87
RNU4-56P-201ENST00000364700 C16orf92Q96LL3 132 aa3.39□□□□□ -1.87
RNU4-56P-201ENST00000364700 KCNJ15Q99712 375 aa3.39□□□□□ -1.87
RNU4-56P-201ENST00000364700 BOCQ9BWV1 1114 aa3.39□□□□□ -1.87
RNU4-56P-201ENST00000364700 IFT22Q9H7X7 185 aa3.39□□□□□ -1.87
RNU4-56P-201ENST00000364700 APOBEC2Q9Y235 224 aaKnown RBP3.39□□□□□ -1.87
RNU4-56P-201ENST00000364700 SPO11Q9Y5K1 396 aa3.39□□□□□ -1.87
RNU4-56P-201ENST00000364700 KCNK3O14649 394 aa3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 HGSO14964 777 aaPredicted RBP3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 GSTA4O15217 222 aa3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 PPM1GO15355 546 aaPredicted RBP3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 DGKIO75912 1065 aa3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 PRKD3O94806 890 aa3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 MPIG6BO95866 241 aa3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 FSHBP01225 129 aa3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 GNAT1P11488 350 aa3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 IBSPP21815 317 aaPredicted RBP3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 MC3RP41968 323 aa3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 EXOSC10Q01780 885 aaKnown RBP3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 CACNB2Q08289 660 aaPredicted RBP3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 SPIRE1Q08AE8 756 aa3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 KIAA2012Q0VF49 1180 aa3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 TERF2Q15554 542 aa3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 CRY1Q16526 586 aa3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 TBC1D10BQ4KMP7 808 aaPredicted RBP3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 CATSPEREQ5SY80 951 aa3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 GPR158Q5T848 1215 aa3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 RNF219Q5W0B1 726 aaPredicted RBP3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 STEAP3Q658P3 488 aa3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 TTLL7Q6ZT98 887 aa3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 CABP7Q86V35 215 aa3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 SPATS2Q86XZ4 545 aaKnown RBP3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 RBM12BQ8IXT5 1001 aaKnown RBP3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 RAVER1Q8IY67 606 aaKnown RBP3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 ARRDC4Q8NCT1 418 aa3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 OR2W6PQ8NHA6 318 aa3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 WDR66Q8TBY9 1149 aa3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 COG1Q8WTW3 980 aa3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 SEC14L1Q92503 715 aa3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 FOXRED1Q96CU9 486 aaPredicted RBP3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 LOXL4Q96JB6 756 aa3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 C8orf49Q96NF6 230 aa3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 ELF4Q99607 663 aaPredicted RBP3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 CD244Q9BZW8 370 aa3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 RXFP1Q9HBX9 757 aa3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 CATSPERZQ9NTU4 200 aa3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 SPATA6Q9NWH7 488 aaPredicted RBP3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 THG1LQ9NWX6 298 aaKnown RBP3.38□□□□□ -1.87
RNU4-56P-201ENST00000364700 BTG4Q9NY30 223 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms