RNA–Protein interactions for RNA: ENST00000363347.1

RNU6-839P-201, Transcript of RNA, U6 small nuclear 839, pseudogene, humanhuman

BASIC

Gene RNU6-839P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-839P-201ENST00000363347 ACSS2Q9NR19 701 aa5.73□□□□□ -1.49
RNU6-839P-201ENST00000363347 ASH2LQ9UBL3 628 aa5.73□□□□□ -1.49
RNU6-839P-201ENST00000363347 PALD1Q9ULE6 856 aa5.73□□□□□ -1.49
RNU6-839P-201ENST00000363347 ZNF652Q9Y2D9 606 aa5.73□□□□□ -1.49
RNU6-839P-201ENST00000363347 FAN1Q9Y2M0 1017 aa5.73□□□□□ -1.49
RNU6-839P-201ENST00000363347 NOC2LQ9Y3T9 749 aaKnown RBP5.73□□□□□ -1.49
RNU6-839P-201ENST00000363347 LCHNA4D1U4 455 aa5.72□□□□□ -1.49
RNU6-839P-201ENST00000363347 FAM90A27PA6NNH2 459 aa5.72□□□□□ -1.49
RNU6-839P-201ENST00000363347 SGSM2O43147 1006 aa5.72□□□□□ -1.49
RNU6-839P-201ENST00000363347 SRGAP3O43295 1099 aa5.72□□□□□ -1.49
RNU6-839P-201ENST00000363347 KDM1AO60341 852 aa5.72□□□□□ -1.49
RNU6-839P-201ENST00000363347 FOXD2O60548 495 aaPredicted RBP5.72□□□□□ -1.49
RNU6-839P-201ENST00000363347 BUB1BO60566 1050 aaPredicted RBP5.72□□□□□ -1.49
RNU6-839P-201ENST00000363347 PNLIPP16233 465 aa5.72□□□□□ -1.49
RNU6-839P-201ENST00000363347 RGL3Q3MIN7 710 aa5.72□□□□□ -1.49
RNU6-839P-201ENST00000363347 BTBD8Q5XKL5 378 aa5.72□□□□□ -1.49
RNU6-839P-201ENST00000363347 CC2D1AQ6P1N0 951 aaPredicted RBP5.72□□□□□ -1.49
RNU6-839P-201ENST00000363347 MILR1Q7Z6M3 343 aa5.72□□□□□ -1.49
RNU6-839P-201ENST00000363347 ZNF610Q8N9Z0 462 aa5.72□□□□□ -1.49
RNU6-839P-201ENST00000363347 SHISA4Q96DD7 197 aa5.72□□□□□ -1.49
RNU6-839P-201ENST00000363347 CCDC136Q96JN2 1154 aa5.72□□□□□ -1.49
RNU6-839P-201ENST00000363347 RTFDC1Q9BY42 306 aaPredicted RBP5.72□□□□□ -1.49
RNU6-839P-201ENST00000363347 PARD6AQ9NPB6 346 aa5.72□□□□□ -1.49
RNU6-839P-201ENST00000363347 TOPORSQ9NS56 1045 aaPredicted RBP5.72□□□□□ -1.49
RNU6-839P-201ENST00000363347 DBR1Q9UK59 544 aaKnown RBP5.72□□□□□ -1.49
RNU6-839P-201ENST00000363347 NUDT5Q9UKK9 219 aa5.72□□□□□ -1.49
RNU6-839P-201ENST00000363347 SPEF1Q9Y4P9 236 aa5.72□□□□□ -1.49
RNU6-839P-201ENST00000363347 TCRBV5S2A0A599 114 aa5.71□□□□□ -1.5
RNU6-839P-201ENST00000363347 ZC3H12DA2A288 527 aaKnown RBP5.71□□□□□ -1.5
RNU6-839P-201ENST00000363347 CYBBP04839 570 aa5.71□□□□□ -1.5
RNU6-839P-201ENST00000363347 CYP17A1P05093 508 aa5.71□□□□□ -1.5
RNU6-839P-201ENST00000363347 SDHBP21912 280 aa5.71□□□□□ -1.5
RNU6-839P-201ENST00000363347 GLDCP23378 1020 aa5.71□□□□□ -1.5
RNU6-839P-201ENST00000363347 CD40P25942 277 aa5.71□□□□□ -1.5
RNU6-839P-201ENST00000363347 EPHA5P54756 1037 aa5.71□□□□□ -1.5
RNU6-839P-201ENST00000363347 SCAND1P57086 179 aa5.71□□□□□ -1.5
RNU6-839P-201ENST00000363347 GRIN1Q05586 938 aa5.71□□□□□ -1.5
RNU6-839P-201ENST00000363347 SNX17Q15036 470 aa5.71□□□□□ -1.5
RNU6-839P-201ENST00000363347 GPR158Q5T848 1215 aa5.71□□□□□ -1.5
RNU6-839P-201ENST00000363347 RASSF3Q86WH2 238 aa5.71□□□□□ -1.5
RNU6-839P-201ENST00000363347 TRIM48Q8IWZ4 208 aa5.71□□□□□ -1.5
RNU6-839P-201ENST00000363347 CMIPQ8IY22 773 aa5.71□□□□□ -1.5
RNU6-839P-201ENST00000363347 PEX11GQ96HA9 241 aa5.71□□□□□ -1.5
RNU6-839P-201ENST00000363347 FUBP3Q96I24 572 aaKnown RBP eCLIP5.71□□□□□ -1.5
RNU6-839P-201ENST00000363347 ZDHHC5Q9C0B5 715 aa5.71□□□□□ -1.5
RNU6-839P-201ENST00000363347 RNF32Q9H0A6 362 aa5.71□□□□□ -1.5
RNU6-839P-201ENST00000363347 CDH19Q9H159 772 aa5.71□□□□□ -1.5
RNU6-839P-201ENST00000363347 SMG5Q9UPR3 1016 aaKnown RBP5.71□□□□□ -1.5
RNU6-839P-201ENST00000363347 E2F8A0AVK6 867 aa5.7□□□□□ -1.5
RNU6-839P-201ENST00000363347 NUDT19A8MXV4 375 aa5.7□□□□□ -1.5
RNU6-839P-201ENST00000363347 F8W031 263 aaPredicted RBP5.7□□□□□ -1.5
RNU6-839P-201ENST00000363347 FOXP2O15409 715 aa5.7□□□□□ -1.5
RNU6-839P-201ENST00000363347 C4BPAP04003 597 aaKnown RBP5.7□□□□□ -1.5
RNU6-839P-201ENST00000363347 SYN1P17600 705 aa5.7□□□□□ -1.5
RNU6-839P-201ENST00000363347 CCND1P24385 295 aa5.7□□□□□ -1.5
RNU6-839P-201ENST00000363347 LINC00310P59036 64 aa5.7□□□□□ -1.5
RNU6-839P-201ENST00000363347 PCBP2Q15366 365 aaKnown RBP eCLIP5.7□□□□□ -1.5
RNU6-839P-201ENST00000363347 INAVAQ3KP66 663 aa5.7□□□□□ -1.5
RNU6-839P-201ENST00000363347 CATSPEREQ5SY80 951 aa5.7□□□□□ -1.5
RNU6-839P-201ENST00000363347 PGM2L1Q6PCE3 622 aa5.7□□□□□ -1.5
RNU6-839P-201ENST00000363347 PAQR3Q6TCH7 311 aa5.7□□□□□ -1.5
RNU6-839P-201ENST00000363347 ZZZ3Q8IYH5 903 aa5.7□□□□□ -1.5
RNU6-839P-201ENST00000363347 CHPFQ8IZ52 775 aa5.7□□□□□ -1.5
RNU6-839P-201ENST00000363347 ARRDC4Q8NCT1 418 aa5.7□□□□□ -1.5
RNU6-839P-201ENST00000363347 ABHD4Q8TB40 342 aa5.7□□□□□ -1.5
RNU6-839P-201ENST00000363347 CLEC4DQ8WXI8 215 aa5.7□□□□□ -1.5
RNU6-839P-201ENST00000363347 RTF1Q92541 710 aaKnown RBP5.7□□□□□ -1.5
RNU6-839P-201ENST00000363347 EPB41L4BQ9H329 900 aa5.7□□□□□ -1.5
RNU6-839P-201ENST00000363347 DCP1AQ9NPI6 582 aaPredicted RBP5.7□□□□□ -1.5
RNU6-839P-201ENST00000363347 LUC7LQ9NQ29 371 aaKnown RBP5.7□□□□□ -1.5
RNU6-839P-201ENST00000363347 ZNF180Q9UJW8 692 aa5.7□□□□□ -1.5
RNU6-839P-201ENST00000363347 LUC7L2Q9Y383 392 aaKnown RBP5.7□□□□□ -1.5
RNU6-839P-201ENST00000363347 A0A0G2JLL6 359 aaPredicted RBP5.69□□□□□ -1.5
RNU6-839P-201ENST00000363347 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.69□□□□□ -1.5
RNU6-839P-201ENST00000363347 RASSF10A6NK89 507 aa5.69□□□□□ -1.5
RNU6-839P-201ENST00000363347 GOLGA8AA7E2F4 631 aa5.69□□□□□ -1.5
RNU6-839P-201ENST00000363347 GOLGA8BA8MQT2 603 aa5.69□□□□□ -1.5
RNU6-839P-201ENST00000363347 FZD9O00144 591 aa5.69□□□□□ -1.5
RNU6-839P-201ENST00000363347 ETV2O00321 342 aaPredicted RBP5.69□□□□□ -1.5
RNU6-839P-201ENST00000363347 H2AFYO75367 372 aaKnown RBP5.69□□□□□ -1.5
RNU6-839P-201ENST00000363347 MMEP08473 750 aa5.69□□□□□ -1.5
RNU6-839P-201ENST00000363347 SDHAP31040 664 aa5.69□□□□□ -1.5
RNU6-839P-201ENST00000363347 FNTBP49356 437 aa5.69□□□□□ -1.5
RNU6-839P-201ENST00000363347 LRRC32Q14392 662 aa5.69□□□□□ -1.5
RNU6-839P-201ENST00000363347 ADGRF1Q5T601 910 aa5.69□□□□□ -1.5
RNU6-839P-201ENST00000363347 PNMA8AQ86V59 439 aaPredicted RBP5.69□□□□□ -1.5
RNU6-839P-201ENST00000363347 C1orf162Q8NEQ5 155 aaPredicted RBP5.69□□□□□ -1.5
RNU6-839P-201ENST00000363347 ERCC4Q92889 916 aaPredicted RBP5.69□□□□□ -1.5
RNU6-839P-201ENST00000363347 C8orf48Q96LL4 319 aa5.69□□□□□ -1.5
RNU6-839P-201ENST00000363347 ZCCHC4Q9H5U6 513 aa5.69□□□□□ -1.5
RNU6-839P-201ENST00000363347 MKS1Q9NXB0 559 aa5.69□□□□□ -1.5
RNU6-839P-201ENST00000363347 GABBR1Q9UBS5 961 aa5.69□□□□□ -1.5
RNU6-839P-201ENST00000363347 IP6K2Q9UHH9 426 aa5.69□□□□□ -1.5
RNU6-839P-201ENST00000363347 MSRAQ9UJ68 235 aa5.69□□□□□ -1.5
RNU6-839P-201ENST00000363347 NOB1Q9ULX3 412 aaKnown RBP5.69□□□□□ -1.5
RNU6-839P-201ENST00000363347 ACOT7O00154 380 aa5.68□□□□□ -1.5
RNU6-839P-201ENST00000363347 XPOTO43592 962 aaKnown RBP5.68□□□□□ -1.5
RNU6-839P-201ENST00000363347 ABLIM3O94929 683 aa5.68□□□□□ -1.5
RNU6-839P-201ENST00000363347 SNUPNO95149 360 aaKnown RBP5.68□□□□□ -1.5
RNU6-839P-201ENST00000363347 CFBP00751 764 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms