RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 CYP1A1P04798 512 aaPredicted RBP3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 ZSCAN22P10073 491 aaPredicted RBP3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 NCLP19338 710 aaKnown RBP3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 CD40P25942 277 aa3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 LSSP48449 732 aa3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 KCNC1P48547 511 aa3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 DSG1Q02413 1049 aa3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 ROM1Q03395 351 aa3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 KIAA2012Q0VF49 1180 aa3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 MAP3K12Q12852 859 aa3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 FAPQ12884 760 aa3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 ADAM9Q13443 819 aa3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 PCBP1Q15365 356 aaKnown RBP eCLIP3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 EPHA7Q15375 998 aa3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 RGL3Q3MIN7 710 aa3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 VWA3BQ502W6 1294 aa3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 KRTAP5-3Q6L8H2 238 aa3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 TRMT10BQ6PF06 316 aaKnown RBP3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 LIPIQ6XZB0 460 aa3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 PROSER1Q86XN7 944 aa3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 THNSL2Q86YJ6 484 aa3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 CARFQ8N187 725 aa3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 ZCRB1Q8TBF4 217 aaKnown RBP3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 ZSWIM3Q96MP5 696 aa3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 NOX5Q96PH1 765 aa3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 GBP4Q96PP9 640 aa3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 MTFR1LQ9H019 292 aa3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 IFT22Q9H7X7 185 aa3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 THG1LQ9NWX6 298 aaKnown RBP3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 GALNT8Q9NY28 637 aa3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 ZFP69BQ9UJL9 534 aa3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 APOBEC2Q9Y235 224 aaKnown RBP3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 SBNO2Q9Y2G9 1366 aa3.76□□□□□ -1.81
RNU6-428P-201ENST00000362942 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 UBA6A0AVT1 1052 aaPredicted RBP3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 PRAMEF22A3QJZ6 481 aa3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 C9orf118A6NHY6 69 aa3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 H0Y858 1186 aa3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 CUTAO60888 179 aa3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 FKBP9O95302 570 aa3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 MMEP08473 750 aa3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 IBSPP21815 317 aaPredicted RBP3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 LSP1P33241 339 aa3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 IL13P35225 146 aa3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 GLRBP48167 497 aa3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 TTC38Q5R3I4 469 aa3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 GPR158Q5T848 1215 aa3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 TIGD7Q6NT04 549 aaPredicted RBP3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 FKBP9P1Q75LS8 142 aa3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 FILIP1Q7Z7B0 1213 aa3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 RNF180Q86T96 592 aa3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 STK32CQ86UX6 486 aa3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 PHYKPLQ8IUZ5 450 aa3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 IFNL2Q8IZJ0 200 aa3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 NXPE1Q8N323 547 aa3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 C7orf31Q8N865 590 aa3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 SMC1BQ8NDV3 1235 aa3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 ASB15Q8WXK1 588 aa3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 RPGRQ92834 1020 aaKnown RBP3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 GPR101Q96P66 508 aaPredicted RBP3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 FOXB1Q99853 325 aa3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 BTBD2Q9BX70 525 aa3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 TMEM168Q9H0V1 697 aa3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 BARX1Q9HBU1 254 aaPredicted RBP3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 SLC39A2Q9NP94 309 aa3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 LUC7LQ9NQ29 371 aaKnown RBP3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 TOMM22Q9NS69 142 aa3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 SPATA6Q9NWH7 488 aaPredicted RBP3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 OXSMQ9NWU1 459 aa3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 USP36Q9P275 1121 aaKnown RBP3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 KCNG1Q9UIX4 513 aa3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 MCM8Q9UJA3 840 aa3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.75□□□□□ -1.81
RNU6-428P-201ENST00000362942 ZNF891A8MT65 544 aaPredicted RBP3.74□□□□□ -1.81
RNU6-428P-201ENST00000362942 GOLGA6L22H0YM25 854 aa3.74□□□□□ -1.81
RNU6-428P-201ENST00000362942 FFAR3O14843 346 aa3.74□□□□□ -1.81
RNU6-428P-201ENST00000362942 VIL1P09327 827 aaKnown RBP3.74□□□□□ -1.81
RNU6-428P-201ENST00000362942 ATP2A2P16615 1042 aaKnown RBP3.74□□□□□ -1.81
RNU6-428P-201ENST00000362942 ZNF28P17035 718 aa3.74□□□□□ -1.81
RNU6-428P-201ENST00000362942 SLC9A1P19634 815 aa3.74□□□□□ -1.81
RNU6-428P-201ENST00000362942 APEX1P27695 318 aaKnown RBP3.74□□□□□ -1.81
RNU6-428P-201ENST00000362942 ECE1P42892 770 aa3.74□□□□□ -1.81
RNU6-428P-201ENST00000362942 GJA9P57773 515 aa3.74□□□□□ -1.81
RNU6-428P-201ENST00000362942 NFKB2Q00653 900 aa3.74□□□□□ -1.81
RNU6-428P-201ENST00000362942 ALDH6A1Q02252 535 aaKnown RBP3.74□□□□□ -1.81
RNU6-428P-201ENST00000362942 LRRC32Q14392 662 aa3.74□□□□□ -1.81
RNU6-428P-201ENST00000362942 WDR72Q3MJ13 1102 aa3.74□□□□□ -1.81
RNU6-428P-201ENST00000362942 PRR31Q5SQ13 230 aa3.74□□□□□ -1.81
RNU6-428P-201ENST00000362942 BORAQ6PGQ7 559 aa3.74□□□□□ -1.81
RNU6-428P-201ENST00000362942 PLEKHH3Q7Z736 793 aa3.74□□□□□ -1.81
RNU6-428P-201ENST00000362942 REXO1L1PQ8IX06 675 aa3.74□□□□□ -1.81
RNU6-428P-201ENST00000362942 STPG3Q8N7X2 389 aa3.74□□□□□ -1.81
RNU6-428P-201ENST00000362942 ADAMTS17Q8TE56 1095 aa3.74□□□□□ -1.81
RNU6-428P-201ENST00000362942 ZNF526Q8TF50 670 aaPredicted RBP3.74□□□□□ -1.81
RNU6-428P-201ENST00000362942 CHTF18Q8WVB6 975 aa3.74□□□□□ -1.81
RNU6-428P-201ENST00000362942 ERCC4Q92889 916 aaPredicted RBP3.74□□□□□ -1.81
RNU6-428P-201ENST00000362942 MAML3Q96JK9 1138 aa3.74□□□□□ -1.81
RNU6-428P-201ENST00000362942 LCORQ96JN0 433 aaPredicted RBP3.74□□□□□ -1.81
RNU6-428P-201ENST00000362942 TUBGCP5Q96RT8 1024 aa3.74□□□□□ -1.81
RNU6-428P-201ENST00000362942 TACO1Q9BSH4 297 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms