RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 TSPAN17Q96FV3 270 aa4.97□□□□□ -1.61
RNU6-28P-201ENST00000362378 ZNF496Q96IT1 587 aaPredicted RBP4.97□□□□□ -1.61
RNU6-28P-201ENST00000362378 SLC52A1Q9NWF4 448 aa4.97□□□□□ -1.61
RNU6-28P-201ENST00000362378 ANKRD6Q9Y2G4 727 aa4.97□□□□□ -1.61
RNU6-28P-201ENST00000362378 YBX2Q9Y2T7 364 aaKnown RBP4.97□□□□□ -1.61
RNU6-28P-201ENST00000362378 LUC7L2Q9Y383 392 aaKnown RBP4.97□□□□□ -1.61
RNU6-28P-201ENST00000362378 PCDHGA9Q9Y5G4 932 aaKnown RBP4.97□□□□□ -1.61
RNU6-28P-201ENST00000362378 PCDHGA8Q9Y5G5 932 aa4.97□□□□□ -1.61
RNU6-28P-201ENST00000362378 PCDHGA7Q9Y5G6 932 aa4.97□□□□□ -1.61
RNU6-28P-201ENST00000362378 PCDHGA6Q9Y5G7 932 aa4.97□□□□□ -1.61
RNU6-28P-201ENST00000362378 PCDHGA3Q9Y5H0 932 aa4.97□□□□□ -1.61
RNU6-28P-201ENST00000362378 PCDHGA2Q9Y5H1 932 aa4.97□□□□□ -1.61
RNU6-28P-201ENST00000362378 CCDC194A0A1B0GVG4 234 aa4.96□□□□□ -1.62
RNU6-28P-201ENST00000362378 LCHNA4D1U4 455 aa4.96□□□□□ -1.62
RNU6-28P-201ENST00000362378 F8W031 263 aaPredicted RBP4.96□□□□□ -1.62
RNU6-28P-201ENST00000362378 MPOP05164 745 aa4.96□□□□□ -1.62
RNU6-28P-201ENST00000362378 FAHP16930 419 aa4.96□□□□□ -1.62
RNU6-28P-201ENST00000362378 AFMP43652 599 aa4.96□□□□□ -1.62
RNU6-28P-201ENST00000362378 GALK1P51570 392 aa4.96□□□□□ -1.62
RNU6-28P-201ENST00000362378 GRIN1Q05586 938 aa4.96□□□□□ -1.62
RNU6-28P-201ENST00000362378 FSCN1Q16658 493 aaKnown RBP4.96□□□□□ -1.62
RNU6-28P-201ENST00000362378 CXorf57Q6NSI4 855 aaKnown RBP4.96□□□□□ -1.62
RNU6-28P-201ENST00000362378 RTN4RL1Q86UN2 441 aaPredicted RBP4.96□□□□□ -1.62
RNU6-28P-201ENST00000362378 SIRT2Q8IXJ6 389 aa4.96□□□□□ -1.62
RNU6-28P-201ENST00000362378 MAGEB6Q8N7X4 407 aa4.96□□□□□ -1.62
RNU6-28P-201ENST00000362378 TTC8Q8TAM2 541 aa4.96□□□□□ -1.62
RNU6-28P-201ENST00000362378 ABHD4Q8TB40 342 aa4.96□□□□□ -1.62
RNU6-28P-201ENST00000362378 ASB15Q8WXK1 588 aa4.96□□□□□ -1.62
RNU6-28P-201ENST00000362378 FOXRED1Q96CU9 486 aaPredicted RBP4.96□□□□□ -1.62
RNU6-28P-201ENST00000362378 RNF32Q9H0A6 362 aa4.96□□□□□ -1.62
RNU6-28P-201ENST00000362378 RXFP1Q9HBX9 757 aa4.96□□□□□ -1.62
RNU6-28P-201ENST00000362378 MKS1Q9NXB0 559 aa4.96□□□□□ -1.62
RNU6-28P-201ENST00000362378 GABBR1Q9UBS5 961 aa4.96□□□□□ -1.62
RNU6-28P-201ENST00000362378 IP6K2Q9UHH9 426 aa4.96□□□□□ -1.62
RNU6-28P-201ENST00000362378 MSRAQ9UJ68 235 aa4.96□□□□□ -1.62
RNU6-28P-201ENST00000362378 PNMA8BQ9ULN7 279 aaPredicted RBP4.96□□□□□ -1.62
RNU6-28P-201ENST00000362378 GIT1Q9Y2X7 761 aa4.96□□□□□ -1.62
RNU6-28P-201ENST00000362378 ASB1Q9Y576 335 aa4.96□□□□□ -1.62
RNU6-28P-201ENST00000362378 MRFAP1Q9Y605 127 aa4.96□□□□□ -1.62
RNU6-28P-201ENST00000362378 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 KLHL33A6NCF5 533 aa4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 PRAMEF25A6NGN4 478 aa4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 GOLGA6L22H0YM25 854 aa4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 H2AFYO75367 372 aaKnown RBP4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 MMEP08473 750 aa4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 TMEM253P0C7T8 217 aa4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 U2AF1L5P0DN76 240 aaPredicted RBP4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 ENPP1P22413 925 aa4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 AOAHP28039 575 aa4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 MAPKAPK2P49137 400 aa4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 U2AF1Q01081 240 aaKnown RBP eCLIP4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 DBPQ10586 325 aaPredicted RBP4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 HLTFQ14527 1009 aaKnown RBP eCLIP4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 ODF1Q14990 250 aa4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 MLC1Q15049 377 aa4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 RPTNQ6XPR3 784 aa4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 ESPNLQ6ZVH7 1005 aa4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 C14orf80Q86SX3 495 aa4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 PNMA8AQ86V59 439 aaPredicted RBP4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 CXorf67Q86X51 503 aaPredicted RBP4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 MIB1Q86YT6 1006 aa4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 PHYKPLQ8IUZ5 450 aa4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 AMOTL1Q8IY63 956 aa4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 CMTR2Q8IYT2 770 aaKnown RBP4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 SSH1Q8WYL5 1049 aa4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 E2F7Q96AV8 911 aa4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 GBP4Q96PP9 640 aa4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 WNT8AQ9H1J5 351 aa4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 CCM2LQ9NUG4 571 aaPredicted RBP4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 PCMTD2Q9NV79 361 aa4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 DTLQ9NZJ0 730 aa4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 BTBD7Q9P203 1132 aa4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 KCNG1Q9UIX4 513 aa4.95□□□□□ -1.62
RNU6-28P-201ENST00000362378 GOLGA6CA6NDK9 693 aa4.94□□□□□ -1.62
RNU6-28P-201ENST00000362378 GOLGA6BA6NDN3 693 aa4.94□□□□□ -1.62
RNU6-28P-201ENST00000362378 PRPF3O43395 683 aaKnown RBP4.94□□□□□ -1.62
RNU6-28P-201ENST00000362378 LRG1P02750 347 aa4.94□□□□□ -1.62
RNU6-28P-201ENST00000362378 GOLGA6DP0CG33 693 aa4.94□□□□□ -1.62
RNU6-28P-201ENST00000362378 ATF3P18847 181 aa4.94□□□□□ -1.62
RNU6-28P-201ENST00000362378 VCAM1P19320 739 aa4.94□□□□□ -1.62
RNU6-28P-201ENST00000362378 GNALP38405 381 aa4.94□□□□□ -1.62
RNU6-28P-201ENST00000362378 MTNR1BP49286 362 aa4.94□□□□□ -1.62
RNU6-28P-201ENST00000362378 MANFP55145 182 aaKnown RBP4.94□□□□□ -1.62
RNU6-28P-201ENST00000362378 PRR5P85299 388 aa4.94□□□□□ -1.62
RNU6-28P-201ENST00000362378 CCSAPQ6IQ19 270 aaPredicted RBP4.94□□□□□ -1.62
RNU6-28P-201ENST00000362378 CILP2Q8IUL8 1156 aa4.94□□□□□ -1.62
RNU6-28P-201ENST00000362378 FAM126BQ8IXS8 530 aa4.94□□□□□ -1.62
RNU6-28P-201ENST00000362378 INTS4Q96HW7 963 aaKnown RBP4.94□□□□□ -1.62
RNU6-28P-201ENST00000362378 MAML3Q96JK9 1138 aa4.94□□□□□ -1.62
RNU6-28P-201ENST00000362378 NUP88Q99567 741 aaPredicted RBP4.94□□□□□ -1.62
RNU6-28P-201ENST00000362378 SEMA4AQ9H3S1 761 aa4.94□□□□□ -1.62
RNU6-28P-201ENST00000362378 ZNF277Q9NRM2 450 aaPredicted RBP4.94□□□□□ -1.62
RNU6-28P-201ENST00000362378 GOLGA6AQ9NYA3 693 aa4.94□□□□□ -1.62
RNU6-28P-201ENST00000362378 KLHL14Q9P2G3 628 aa4.94□□□□□ -1.62
RNU6-28P-201ENST00000362378 DBR1Q9UK59 544 aaKnown RBP4.94□□□□□ -1.62
RNU6-28P-201ENST00000362378 NOB1Q9ULX3 412 aaKnown RBP4.94□□□□□ -1.62
RNU6-28P-201ENST00000362378 UBA6A0AVT1 1052 aaPredicted RBP4.93□□□□□ -1.62
RNU6-28P-201ENST00000362378 NUDT19A8MXV4 375 aa4.93□□□□□ -1.62
RNU6-28P-201ENST00000362378 ELL2O00472 640 aaPredicted RBP4.93□□□□□ -1.62
RNU6-28P-201ENST00000362378 CAND2O75155 1236 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms